RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 ACSL5Q9ULC5 683 aa21.28■■□□□ 1
LIME1-203ENST00000465591 EIF4E1BA6NMX2 242 aaKnown RBP21.27■■□□□ 1
LIME1-203ENST00000465591 ERI2A8K979 691 aaKnown RBP21.27■■□□□ 1
LIME1-203ENST00000465591 TK2O00142 265 aa21.27■■□□□ 1
LIME1-203ENST00000465591 RAD1O60671 282 aa21.27■■□□□ 1
LIME1-203ENST00000465591 RPL22P35268 128 aaKnown RBP21.27■■□□□ 1
LIME1-203ENST00000465591 CACNG1Q06432 222 aa21.27■■□□□ 1
LIME1-203ENST00000465591 CDH17Q12864 832 aa21.27■■□□□ 1
LIME1-203ENST00000465591 CCNG2Q16589 344 aa21.27■■□□□ 1
LIME1-203ENST00000465591 TAF1BQ53T94 588 aaPredicted RBP21.27■■□□□ 1
LIME1-203ENST00000465591 CAPRIN2Q6IMN6 1127 aaKnown RBP21.27■■□□□ 1
LIME1-203ENST00000465591 PRSS42Q7Z5A4 293 aa21.27■■□□□ 1
LIME1-203ENST00000465591 DNAAF3Q8N9W5 541 aa21.27■■□□□ 1
LIME1-203ENST00000465591 OR13J1Q8NGT2 312 aa21.27■■□□□ 1
LIME1-203ENST00000465591 HM13Q8TCT9 377 aa21.27■■□□□ 1
LIME1-203ENST00000465591 ZNF778Q96MU6 729 aa21.27■■□□□ 1
LIME1-203ENST00000465591 TEFMQ96QE5 360 aaKnown RBP21.27■■□□□ 1
LIME1-203ENST00000465591 RAB33BQ9H082 229 aa21.27■■□□□ 1
LIME1-203ENST00000465591 CASS4Q9NQ75 786 aa21.27■■□□□ 1
LIME1-203ENST00000465591 PPP2R2CQ9Y2T4 447 aa21.27■■□□□ 1
LIME1-203ENST00000465591 PRSS21Q9Y6M0 314 aa21.27■■□□□ 1
LIME1-203ENST00000465591 CCDC162PA2VCL2 907 aa21.26■□□□□ 0.99
LIME1-203ENST00000465591 CFAP99D6REC4 459 aa21.26■□□□□ 0.99
LIME1-203ENST00000465591 RASSF9O75901 435 aa21.26■□□□□ 0.99
LIME1-203ENST00000465591 FGGP02679 453 aa21.26■□□□□ 0.99
LIME1-203ENST00000465591 SLC35G4P0C7Q5 338 aa21.26■□□□□ 0.99
LIME1-203ENST00000465591 MSNP26038 577 aaKnown RBP21.26■□□□□ 0.99
LIME1-203ENST00000465591 CXCR5P32302 372 aa21.26■□□□□ 0.99
LIME1-203ENST00000465591 FOXN2P32314 431 aa21.26■□□□□ 0.99
LIME1-203ENST00000465591 CYP4F2P78329 520 aa21.26■□□□□ 0.99
LIME1-203ENST00000465591 LY6DQ14210 128 aa21.26■□□□□ 0.99
LIME1-203ENST00000465591 CACHD1Q5VU97 1274 aa21.26■□□□□ 0.99
LIME1-203ENST00000465591 CEACAM20Q6UY09 585 aa21.26■□□□□ 0.99
LIME1-203ENST00000465591 CACNA2D3Q8IZS8 1091 aa21.26■□□□□ 0.99
LIME1-203ENST00000465591 HEXDCQ8WVB3 486 aa21.26■□□□□ 0.99
LIME1-203ENST00000465591 KLHL6Q8WZ60 621 aa21.26■□□□□ 0.99
LIME1-203ENST00000465591 NRTNQ99748 197 aa21.26■□□□□ 0.99
LIME1-203ENST00000465591 COG4Q9H9E3 785 aa21.26■□□□□ 0.99
LIME1-203ENST00000465591 SLC24A2Q9UI40 661 aa21.26■□□□□ 0.99
LIME1-203ENST00000465591 SPTBP11277 2137 aa21.25■□□□□ 0.99
LIME1-203ENST00000465591 IGHV5-51A0A0C4DH38 117 aa21.25■□□□□ 0.99
LIME1-203ENST00000465591 KLHL33A6NCF5 533 aa21.25■□□□□ 0.99
LIME1-203ENST00000465591 POLR1CO15160 346 aaPredicted RBP21.25■□□□□ 0.99
LIME1-203ENST00000465591 TOX3O15405 576 aaPredicted RBP21.25■□□□□ 0.99
LIME1-203ENST00000465591 LIFP15018 202 aa21.25■□□□□ 0.99
LIME1-203ENST00000465591 PDHA2P29803 388 aa21.25■□□□□ 0.99
LIME1-203ENST00000465591 KCNJ1P48048 391 aa21.25■□□□□ 0.99
LIME1-203ENST00000465591 ATP1A2P50993 1020 aa21.25■□□□□ 0.99
LIME1-203ENST00000465591 FOXM1Q08050 763 aa21.25■□□□□ 0.99
LIME1-203ENST00000465591 PLCL1Q15111 1095 aa21.25■□□□□ 0.99
LIME1-203ENST00000465591 PPP1R21Q6ZMI0 780 aa21.25■□□□□ 0.99
LIME1-203ENST00000465591 IL22RA1Q8N6P7 574 aa21.25■□□□□ 0.99
LIME1-203ENST00000465591 CCDC89Q8N998 374 aa21.25■□□□□ 0.99
LIME1-203ENST00000465591 TRIM58Q8NG06 486 aa21.25■□□□□ 0.99
LIME1-203ENST00000465591 ANP32BQ92688 251 aaKnown RBP21.25■□□□□ 0.99
LIME1-203ENST00000465591 ZDHHC12Q96GR4 267 aa21.25■□□□□ 0.99
LIME1-203ENST00000465591 OR52A5Q9H2C5 316 aa21.25■□□□□ 0.99
LIME1-203ENST00000465591 SEMA5BQ9P283 1151 aa21.25■□□□□ 0.99
LIME1-203ENST00000465591 PAK5Q9P286 719 aa21.25■□□□□ 0.99
LIME1-203ENST00000465591 C17orf113A0A1B0GUU1 675 aa21.24■□□□□ 0.99
LIME1-203ENST00000465591 E7EVH7 732 aa21.24■□□□□ 0.99
LIME1-203ENST00000465591 STK17BO94768 372 aa21.24■□□□□ 0.99
LIME1-203ENST00000465591 DLGAP3O95886 979 aa21.24■□□□□ 0.99
LIME1-203ENST00000465591 APRTP07741 180 aa21.24■□□□□ 0.99
LIME1-203ENST00000465591 ZNF28P17035 718 aa21.24■□□□□ 0.99
LIME1-203ENST00000465591 PREPP48147 710 aa21.24■□□□□ 0.99
LIME1-203ENST00000465591 LMAN1P49257 510 aa21.24■□□□□ 0.99
LIME1-203ENST00000465591 SKIDA1Q1XH10 827 aa21.24■□□□□ 0.99
LIME1-203ENST00000465591 LINC00303Q3SY05 128 aa21.24■□□□□ 0.99
LIME1-203ENST00000465591 TSTD2Q5T7W7 516 aa21.24■□□□□ 0.99
LIME1-203ENST00000465591 DRICH1Q6PGQ1 229 aaPredicted RBP21.24■□□□□ 0.99
LIME1-203ENST00000465591 CERS6Q6ZMG9 384 aa21.24■□□□□ 0.99
LIME1-203ENST00000465591 HDAC10Q969S8 669 aa21.24■□□□□ 0.99
LIME1-203ENST00000465591 WBP1Q96G27 269 aa21.24■□□□□ 0.99
LIME1-203ENST00000465591 OR6C1Q96RD1 312 aa21.24■□□□□ 0.99
LIME1-203ENST00000465591 MAP3K3Q99759 626 aa21.24■□□□□ 0.99
LIME1-203ENST00000465591 CCM2Q9BSQ5 444 aa21.24■□□□□ 0.99
LIME1-203ENST00000465591 KIR3DX1Q9H7L2 352 aa21.24■□□□□ 0.99
LIME1-203ENST00000465591 SMARCAL1Q9NZC9 954 aa21.24■□□□□ 0.99
LIME1-203ENST00000465591 DRG1Q9Y295 367 aaKnown RBP21.24■□□□□ 0.99
LIME1-203ENST00000465591 TMEM184BQ9Y519 407 aaPredicted RBP21.24■□□□□ 0.99
LIME1-203ENST00000465591 HEATR9A2RTY3 570 aa21.23■□□□□ 0.99
LIME1-203ENST00000465591 OR5K3A6NET4 321 aa21.23■□□□□ 0.99
LIME1-203ENST00000465591 CEP104O60308 925 aa21.23■□□□□ 0.99
LIME1-203ENST00000465591 ARCN1P48444 511 aaKnown RBP21.23■□□□□ 0.99
LIME1-203ENST00000465591 GSE1Q14687 1217 aa21.23■□□□□ 0.99
LIME1-203ENST00000465591 ZNF534Q76KX8 674 aa21.23■□□□□ 0.99
LIME1-203ENST00000465591 UNC5BQ8IZJ1 945 aa21.23■□□□□ 0.99
LIME1-203ENST00000465591 ZNF843Q8N446 348 aa21.23■□□□□ 0.99
LIME1-203ENST00000465591 ELMO2Q96JJ3 720 aa21.23■□□□□ 0.99
LIME1-203ENST00000465591 PPM1MQ96MI6 270 aa21.23■□□□□ 0.99
LIME1-203ENST00000465591 RANBP9Q96S59 729 aa21.23■□□□□ 0.99
LIME1-203ENST00000465591 ZPBPQ9BS86 351 aa21.23■□□□□ 0.99
LIME1-203ENST00000465591 SLC12A9Q9BXP2 914 aa21.23■□□□□ 0.99
LIME1-203ENST00000465591 ZNF462Q96JM2 2506 aa21.23■□□□□ 0.99
LIME1-203ENST00000465591 LOC101059948A0A1B0GTJ6 334 aa21.22■□□□□ 0.99
LIME1-203ENST00000465591 GOT2P00505 430 aaKnown RBP21.22■□□□□ 0.99
LIME1-203ENST00000465591 NELFEP18615 380 aaKnown RBP21.22■□□□□ 0.99
LIME1-203ENST00000465591 ADRA1DP25100 572 aa21.22■□□□□ 0.99
LIME1-203ENST00000465591 ACVR1Q04771 509 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms