RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	TBCE	Q15813	527 aa	Predicted RBP	5.07	□□□□□ -1.6
CACNA1C-223	ENST00000465278	DUSP6	Q16828	381 aa		5.07	□□□□□ -1.6
CACNA1C-223	ENST00000465278	AP1AR	Q63HQ0	302 aa		5.07	□□□□□ -1.6
CACNA1C-223	ENST00000465278	HIST2H2BC	Q6DN03	193 aa		5.07	□□□□□ -1.6
CACNA1C-223	ENST00000465278	SLC46A3	Q7Z3Q1	461 aa		5.07	□□□□□ -1.6
CACNA1C-223	ENST00000465278	DHX40	Q8IX18	779 aa	Known RBP	5.07	□□□□□ -1.6
CACNA1C-223	ENST00000465278	RBFA	Q8N0V3	343 aa		5.07	□□□□□ -1.6
CACNA1C-223	ENST00000465278	ZMIZ2	Q8NF64	920 aa		5.07	□□□□□ -1.6
CACNA1C-223	ENST00000465278	GJC3	Q8NFK1	279 aa		5.07	□□□□□ -1.6
CACNA1C-223	ENST00000465278	ATP8B4	Q8TF62	1192 aa		5.07	□□□□□ -1.6
CACNA1C-223	ENST00000465278	VOPP1	Q96AW1	172 aa		5.07	□□□□□ -1.6
CACNA1C-223	ENST00000465278	TMEM18	Q96B42	140 aa		5.07	□□□□□ -1.6
CACNA1C-223	ENST00000465278	HMCES	Q96FZ2	354 aa		5.07	□□□□□ -1.6
CACNA1C-223	ENST00000465278	ZC3HAV1L	Q96H79	300 aa	Known RBP	5.07	□□□□□ -1.6
CACNA1C-223	ENST00000465278	URB1-AS1	Q96HZ7	61 aa		5.07	□□□□□ -1.6
CACNA1C-223	ENST00000465278	APOLD1	Q96LR9	279 aa		5.07	□□□□□ -1.6
CACNA1C-223	ENST00000465278	BBS4	Q96RK4	519 aa		5.07	□□□□□ -1.6
CACNA1C-223	ENST00000465278	SH3GL3	Q99963	347 aa		5.07	□□□□□ -1.6
CACNA1C-223	ENST00000465278	TRIM7	Q9C029	511 aa		5.07	□□□□□ -1.6
CACNA1C-223	ENST00000465278	UPF3A	Q9H1J1	476 aa	Known RBP	5.07	□□□□□ -1.6
CACNA1C-223	ENST00000465278	KLHL31	Q9H511	634 aa		5.07	□□□□□ -1.6
CACNA1C-223	ENST00000465278	UPF2	Q9HAU5	1272 aa	Known RBP	5.07	□□□□□ -1.6
CACNA1C-223	ENST00000465278	OGFR	Q9NZT2	677 aa		5.07	□□□□□ -1.6
CACNA1C-223	ENST00000465278	MPP6	Q9NZW5	540 aa		5.07	□□□□□ -1.6
CACNA1C-223	ENST00000465278	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	5.07	□□□□□ -1.6
CACNA1C-223	ENST00000465278	ANKHD1	Q8IWZ3	2542 aa	Known RBP	5.07	□□□□□ -1.6
CACNA1C-223	ENST00000465278	CENPE	Q02224	2701 aa		5.07	□□□□□ -1.6
CACNA1C-223	ENST00000465278	TTC41P	Q6P2S7	1318 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	MYH2	Q9UKX2	1941 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	UQCRHL	A0A096LP55	91 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	RPS10-NUDT3	A0A1W2PQS6	291 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	CLEC18A	A5D8T8	446 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	GAGE12J	A6NER3	117 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	HSPB2	A8KAH6	182 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	DUSP11	O75319	330 aa	Known RBP	5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	SURF6	O75683	361 aa	Known RBP	5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	CIAO1	O76071	339 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	RGS11	O94810	467 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	RB1	P06400	928 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	HEXA	P06865	529 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	UQCRH	P07919	91 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	ZNF806	P0C7X5	589 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	MYZAP	P0CAP1	466 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	CBSL	P0DN79	551 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	CDK4	P11802	303 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	PTPN2	P17706	415 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	CBS	P35520	551 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	NRIP1	P48552	1158 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	GRIK3	Q13003	919 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	ITGAD	Q13349	1161 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	HSPB2	Q16082	182 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	SOWAHA	Q2M3V2	549 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	CCDC152	Q4G0S7	254 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	GPATCH4	Q5T3I0	446 aa	Known RBP	5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	INO80C	Q6PI98	192 aa	Predicted RBP	5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	CLEC18B	Q6UXF7	455 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	C1orf122	Q6ZSJ8	110 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278		Q6ZSV7	163 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	ATG9A	Q7Z3C6	839 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	NOXA1	Q86UR1	476 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	PALB2	Q86YC2	1186 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	ERC1	Q8IUD2	1116 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	ZCCHC9	Q8N567	271 aa	Known RBP	5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	TEX45	Q8NA69	505 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	TDRD5	Q8NAT2	981 aa	Known RBP	5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	DRAXIN	Q8NBI3	349 aa	Predicted RBP	5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	CLEC18C	Q8NCF0	446 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	CADM4	Q8NFZ8	388 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	ZNF48	Q96MX3	618 aa	Predicted RBP	5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	NR1H4	Q96RI1	486 aa	Predicted RBP	5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	IWS1	Q96ST2	819 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	PIP5K1A	Q99755	562 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	MSTO1	Q9BUK6	570 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	C1QTNF7	Q9BXJ2	289 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	MAK16	Q9BXY0	300 aa	Known RBP	5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	TRIM4	Q9C037	500 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	POMK	Q9H5K3	350 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	PRMT8	Q9NR22	394 aa	Predicted RBP	5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	HOXC10	Q9NYD6	342 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	NDRG3	Q9UGV2	375 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	A4GNT	Q9UNA3	340 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	EXOC6B	Q9Y2D4	811 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	FAM96B	Q9Y3D0	163 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	LSM4	Q9Y4Z0	139 aa	Known RBP	5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	INSL5	Q9Y5Q6	135 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	IKBKG	Q9Y6K9	419 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	PIAS3	Q9Y6X2	628 aa		5.06	□□□□□ -1.6
CACNA1C-223	ENST00000465278	BSN	Q9UPA5	3926 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	MED13	Q9UHV7	2174 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	NIPBL	Q6KC79	2804 aa	eCLIP	5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278		A0A1B0GVT2	93 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	NPIPB15	A6NHN6	443 aa	Predicted RBP	5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	TMEM110-MUSTN1	A8MSY1	372 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	FAM25E	A8MYX2	175 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	KDM4E	B2RXH2	506 aa	Predicted RBP	5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	EBAG9	O00559	213 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	LIAS	O43766	372 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	CRYAB	P02511	175 aa	Known RBP	5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	MMP3	P08254	477 aa		5.05	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms