RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 REM2Q8IYK8 340 aaPredicted RBP18.39■□□□□ 0.54
TSPAN4-210ENST00000464987 RBFAQ8N0V3 343 aa18.39■□□□□ 0.54
TSPAN4-210ENST00000464987 PDPRQ8NCN5 879 aa18.39■□□□□ 0.54
TSPAN4-210ENST00000464987 NMD3Q96D46 503 aaKnown RBP18.39■□□□□ 0.54
TSPAN4-210ENST00000464987 KCTD14Q9BQ13 255 aaPredicted RBP18.39■□□□□ 0.54
TSPAN4-210ENST00000464987 AGPAT4Q9NRZ5 378 aa18.39■□□□□ 0.54
TSPAN4-210ENST00000464987 FARSBQ9NSD9 589 aaKnown RBP18.39■□□□□ 0.54
TSPAN4-210ENST00000464987 ZIM2Q9NZV7 527 aa18.39■□□□□ 0.54
TSPAN4-210ENST00000464987 GNPTGQ9UJJ9 305 aa18.39■□□□□ 0.54
TSPAN4-210ENST00000464987 POLR3HQ9Y535 204 aaPredicted RBP18.39■□□□□ 0.54
TSPAN4-210ENST00000464987 V9GYQ6 96 aa18.39■□□□□ 0.54
TSPAN4-210ENST00000464987 GLYATL1P3A0A0U1RQE8 302 aa18.39■□□□□ 0.53
TSPAN4-210ENST00000464987 TCRBV5S2A0A599 114 aa18.39■□□□□ 0.53
TSPAN4-210ENST00000464987 FAM234BA2RU67 622 aa18.39■□□□□ 0.53
TSPAN4-210ENST00000464987 RAD51BO15315 384 aa18.39■□□□□ 0.53
TSPAN4-210ENST00000464987 MT-ND1P03886 318 aa18.39■□□□□ 0.53
TSPAN4-210ENST00000464987 PSMA4P25789 261 aaKnown RBP18.39■□□□□ 0.53
TSPAN4-210ENST00000464987 SLC5A9Q2M3M2 681 aa18.39■□□□□ 0.53
TSPAN4-210ENST00000464987 AP5B1Q2VPB7 878 aa18.39■□□□□ 0.53
TSPAN4-210ENST00000464987 IRAK1BP1Q5VVH5 260 aa18.39■□□□□ 0.53
TSPAN4-210ENST00000464987 CWF19L1Q69YN2 538 aaKnown RBP18.39■□□□□ 0.53
TSPAN4-210ENST00000464987 PPP4R4Q6NUP7 873 aa18.39■□□□□ 0.53
TSPAN4-210ENST00000464987 RBM44Q6ZP01 1051 aaKnown RBP18.39■□□□□ 0.53
TSPAN4-210ENST00000464987 RALGPS2Q86X27 583 aaPredicted RBP18.39■□□□□ 0.53
TSPAN4-210ENST00000464987 CBR4Q8N4T8 237 aa18.39■□□□□ 0.53
TSPAN4-210ENST00000464987 GPR26Q8NDV2 337 aa18.39■□□□□ 0.53
TSPAN4-210ENST00000464987 EGFL8Q99944 293 aa18.39■□□□□ 0.53
TSPAN4-210ENST00000464987 MRPS26Q9BYN8 205 aaKnown RBP18.39■□□□□ 0.53
TSPAN4-210ENST00000464987 SUN2Q9UH99 717 aa18.39■□□□□ 0.53
TSPAN4-210ENST00000464987 CRLS1Q9UJA2 301 aa18.39■□□□□ 0.53
TSPAN4-210ENST00000464987 TRBV5-4A0A0C4DH59 114 aa18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 VILLO15195 856 aa18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 ITGALP20701 1170 aa18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 HTRA3P83110 453 aa18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 ROR2Q01974 943 aaKnown RBP18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 INPP5AQ14642 412 aa18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 MYLK3Q32MK0 819 aa18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 CNKSR3Q6P9H4 555 aa18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 CYP20A1Q6UW02 462 aa18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 MILR1Q7Z6M3 343 aa18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 RC3H2Q9HBD1 1191 aaKnown RBP18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 ANKRD28O15084 1053 aa18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 HNRNPRO43390 633 aaKnown RBP18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 HRH2P25021 359 aa18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 OR4D2P58180 307 aa18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 PLOD1Q02809 727 aaPredicted RBP18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 PRKG2Q13237 762 aa18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 PLEKHG6Q3KR16 790 aa18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 LRRC73Q5JTD7 316 aa18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 GPRC6AQ5T6X5 926 aa18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 DLEU7Q6UYE1 221 aa18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 PTRH1Q86Y79 214 aaKnown RBP18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 FIBCD1Q8N539 461 aa18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 ACDQ96AP0 544 aa18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 ISG20Q96AZ6 181 aaKnown RBP18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 PPM1MQ96MI6 270 aa18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 FAM126AQ9BYI3 521 aaPredicted RBP18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 TRIM15Q9C019 465 aa18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 RNF208Q9H0X6 261 aa18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 RPF2Q9H7B2 306 aaKnown RBP18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 HEBP1Q9NRV9 189 aa18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 CCL27Q9Y4X3 112 aa18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 OARD1Q9Y530 152 aa18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 TNPO3Q9Y5L0 923 aaKnown RBP18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 LTBP2Q14767 1821 aa18.38■□□□□ 0.53
TSPAN4-210ENST00000464987 SMIM31A0A1B0GVY4 71 aa18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 GLUD1P00367 558 aa18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 S100BP04271 92 aaPredicted RBP18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 GNAO1P09471 354 aa18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 IL10P22301 178 aa18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 HMOX2P30519 316 aa18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 MTPNP58546 118 aa18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 ZBTB2Q8N680 514 aa18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 SH3GL3Q99963 347 aa18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 OLAHQ9NV23 265 aa18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 MBD1Q9UIS9 605 aaPredicted RBP18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 OGDHLQ9ULD0 1010 aa18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 SH3BP1Q9Y3L3 701 aa18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 NEUROG3Q9Y4Z2 214 aa18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 A0A1W2PRU2 124 aa18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 TGM5O43548 720 aa18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 HMGCS1Q01581 520 aa18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 EMX2Q04743 252 aa18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 PTGR1Q14914 329 aa18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 PYCR3Q53H96 274 aa18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 CRTC1Q6UUV9 634 aa18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 DDX53Q86TM3 631 aaKnown RBP18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 CMTM8Q8IZV2 173 aa18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 RHBDF1Q96CC6 855 aa18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 EPB41L1Q9H4G0 881 aa18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 ABCB8Q9NUT2 735 aa18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 SPG21Q9NZD8 308 aa18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 LSM7Q9UK45 103 aaKnown RBP18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 OAZ3Q9UMX2 235 aa18.37■□□□□ 0.53
TSPAN4-210ENST00000464987 OTCP00480 354 aa18.36■□□□□ 0.53
TSPAN4-210ENST00000464987 SRCP12931 536 aa18.36■□□□□ 0.53
TSPAN4-210ENST00000464987 DGKAP23743 735 aa18.36■□□□□ 0.53
TSPAN4-210ENST00000464987 FASP25445 335 aa18.36■□□□□ 0.53
TSPAN4-210ENST00000464987 SPAM1P38567 509 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms