RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 TMEM220Q6QAJ8 160 aa16.84■□□□□ 0.29
HMGN1-210ENST00000464078 NPNTQ6UXI9 565 aa16.84■□□□□ 0.29
HMGN1-210ENST00000464078 FAM151BQ6UXP7 276 aa16.84■□□□□ 0.29
HMGN1-210ENST00000464078 FDCSPQ8NFU4 85 aa16.84■□□□□ 0.29
HMGN1-210ENST00000464078 INSM2Q96T92 566 aaPredicted RBP16.84■□□□□ 0.29
HMGN1-210ENST00000464078 SMAD5Q99717 465 aaKnown RBP16.84■□□□□ 0.29
HMGN1-210ENST00000464078 NUDT9Q9BW91 350 aa16.84■□□□□ 0.29
HMGN1-210ENST00000464078 PACSIN1Q9BY11 444 aa16.84■□□□□ 0.29
HMGN1-210ENST00000464078 FANCEQ9HB96 536 aa16.84■□□□□ 0.29
HMGN1-210ENST00000464078 SLAMF7Q9NQ25 335 aa16.84■□□□□ 0.29
HMGN1-210ENST00000464078 SOHLH2Q9NX45 425 aa16.84■□□□□ 0.29
HMGN1-210ENST00000464078 UBP1Q9NZI7 540 aa16.84■□□□□ 0.29
HMGN1-210ENST00000464078 POMT2Q9UKY4 750 aa16.84■□□□□ 0.29
HMGN1-210ENST00000464078 OR6C74A6NCV1 312 aa16.83■□□□□ 0.28
HMGN1-210ENST00000464078 MGAT4DA6NG13 374 aa16.83■□□□□ 0.28
HMGN1-210ENST00000464078 ENO4A6NNW6 628 aa16.83■□□□□ 0.28
HMGN1-210ENST00000464078 MATN2O00339 956 aa16.83■□□□□ 0.28
HMGN1-210ENST00000464078 UGT1A9O60656 530 aa16.83■□□□□ 0.28
HMGN1-210ENST00000464078 PYGMP11217 842 aa16.83■□□□□ 0.28
HMGN1-210ENST00000464078 UGT1A6P19224 532 aa16.83■□□□□ 0.28
HMGN1-210ENST00000464078 UGT1A1P22309 533 aa16.83■□□□□ 0.28
HMGN1-210ENST00000464078 UGT1A4P22310 534 aa16.83■□□□□ 0.28
HMGN1-210ENST00000464078 CD68P34810 354 aaPredicted RBP16.83■□□□□ 0.28
HMGN1-210ENST00000464078 CA5AP35218 305 aa16.83■□□□□ 0.28
HMGN1-210ENST00000464078 NR2C2P49116 596 aa16.83■□□□□ 0.28
HMGN1-210ENST00000464078 ITGA1P56199 1179 aa16.83■□□□□ 0.28
HMGN1-210ENST00000464078 ABRQ12979 859 aa16.83■□□□□ 0.28
HMGN1-210ENST00000464078 MRPL49Q13405 166 aaKnown RBP16.83■□□□□ 0.28
HMGN1-210ENST00000464078 NOMO1Q15155 1222 aa16.83■□□□□ 0.28
HMGN1-210ENST00000464078 SLC18A3Q16572 532 aa16.83■□□□□ 0.28
HMGN1-210ENST00000464078 ZNF789Q5FWF6 425 aa16.83■□□□□ 0.28
HMGN1-210ENST00000464078 ARMC6Q6NXE6 501 aa16.83■□□□□ 0.28
HMGN1-210ENST00000464078 MAMDC2Q7Z304 686 aaPredicted RBP16.83■□□□□ 0.28
HMGN1-210ENST00000464078 RBMXL3Q8N7X1 1067 aaKnown RBP16.83■□□□□ 0.28
HMGN1-210ENST00000464078 OR2L2Q8NH16 312 aa16.83■□□□□ 0.28
HMGN1-210ENST00000464078 PCSK5Q92824 1860 aa16.83■□□□□ 0.28
HMGN1-210ENST00000464078 C12orf66Q96MD2 445 aa16.83■□□□□ 0.28
HMGN1-210ENST00000464078 DPH2Q9BQC3 489 aaPredicted RBP16.83■□□□□ 0.28
HMGN1-210ENST00000464078 TLR10Q9BXR5 811 aa16.83■□□□□ 0.28
HMGN1-210ENST00000464078 MAK16Q9BXY0 300 aaKnown RBP16.83■□□□□ 0.28
HMGN1-210ENST00000464078 WWP1Q9H0M0 922 aa16.83■□□□□ 0.28
HMGN1-210ENST00000464078 UGT1A7Q9HAW7 530 aa16.83■□□□□ 0.28
HMGN1-210ENST00000464078 UGT1A10Q9HAW8 530 aa16.83■□□□□ 0.28
HMGN1-210ENST00000464078 UGT1A8Q9HAW9 530 aa16.83■□□□□ 0.28
HMGN1-210ENST00000464078 CASS4Q9NQ75 786 aa16.83■□□□□ 0.28
HMGN1-210ENST00000464078 GPR83Q9NYM4 423 aa16.83■□□□□ 0.28
HMGN1-210ENST00000464078 CFAP20Q9Y6A4 193 aaKnown RBP16.83■□□□□ 0.28
HMGN1-210ENST00000464078 A1L4Q6 167 aa16.82■□□□□ 0.28
HMGN1-210ENST00000464078 SLC35G4P0C7Q5 338 aa16.82■□□□□ 0.28
HMGN1-210ENST00000464078 TMEM253P0C7T8 217 aa16.82■□□□□ 0.28
HMGN1-210ENST00000464078 HLA-DPA1P20036 260 aa16.82■□□□□ 0.28
HMGN1-210ENST00000464078 CHRNA4P43681 627 aa16.82■□□□□ 0.28
HMGN1-210ENST00000464078 FANCCQ00597 558 aa16.82■□□□□ 0.28
HMGN1-210ENST00000464078 WASHC5Q12768 1159 aa16.82■□□□□ 0.28
HMGN1-210ENST00000464078 MESDQ14696 234 aa16.82■□□□□ 0.28
HMGN1-210ENST00000464078 SLC1A5Q15758 541 aa16.82■□□□□ 0.28
HMGN1-210ENST00000464078 EIF2S3LQ2VIR3 472 aaKnown RBP16.82■□□□□ 0.28
HMGN1-210ENST00000464078 BCL7AQ4VC05 210 aa16.82■□□□□ 0.28
HMGN1-210ENST00000464078 FNBP1LQ5T0N5 605 aa16.82■□□□□ 0.28
HMGN1-210ENST00000464078 LCN10Q6JVE6 187 aa16.82■□□□□ 0.28
HMGN1-210ENST00000464078 DUS1LQ6P1R4 473 aaKnown RBP16.82■□□□□ 0.28
HMGN1-210ENST00000464078 GLT6D1Q7Z4J2 308 aa16.82■□□□□ 0.28
HMGN1-210ENST00000464078 SYTL1Q8IYJ3 562 aa16.82■□□□□ 0.28
HMGN1-210ENST00000464078 SPDYE1Q8NFV5 336 aaPredicted RBP16.82■□□□□ 0.28
HMGN1-210ENST00000464078 CPLX3Q8WVH0 158 aa16.82■□□□□ 0.28
HMGN1-210ENST00000464078 MRGPRX2Q96LB1 330 aa16.82■□□□□ 0.28
HMGN1-210ENST00000464078 LINC00615Q96LM1 132 aaPredicted RBP16.82■□□□□ 0.28
HMGN1-210ENST00000464078 RMDN2Q96LZ7 410 aa16.82■□□□□ 0.28
HMGN1-210ENST00000464078 PPM1MQ96MI6 270 aa16.82■□□□□ 0.28
HMGN1-210ENST00000464078 PITPNM3Q9BZ71 974 aa16.82■□□□□ 0.28
HMGN1-210ENST00000464078 C1GALT1Q9NS00 363 aa16.82■□□□□ 0.28
HMGN1-210ENST00000464078 PCMTD2Q9NV79 361 aa16.82■□□□□ 0.28
HMGN1-210ENST00000464078 LUZP4Q9P127 313 aa16.82■□□□□ 0.28
HMGN1-210ENST00000464078 C5AR2Q9P296 337 aa16.82■□□□□ 0.28
HMGN1-210ENST00000464078 PKP3Q9Y446 797 aa16.82■□□□□ 0.28
HMGN1-210ENST00000464078 ANKRD17O75179 2603 aaKnown RBP16.82■□□□□ 0.28
HMGN1-210ENST00000464078 FER1L5A0AVI2 2057 aa16.81■□□□□ 0.28
HMGN1-210ENST00000464078 LDLRP01130 860 aa16.81■□□□□ 0.28
HMGN1-210ENST00000464078 KRT1P04264 644 aa16.81■□□□□ 0.28
HMGN1-210ENST00000464078 NFKB1P19838 968 aa16.81■□□□□ 0.28
HMGN1-210ENST00000464078 NDUFS1P28331 727 aa16.81■□□□□ 0.28
HMGN1-210ENST00000464078 PBLDP30039 288 aaPredicted RBP16.81■□□□□ 0.28
HMGN1-210ENST00000464078 AKT1P31749 480 aa16.81■□□□□ 0.28
HMGN1-210ENST00000464078 ARHGAP25P42331 645 aa16.81■□□□□ 0.28
HMGN1-210ENST00000464078 TNNT3P45378 269 aaPredicted RBP16.81■□□□□ 0.28
HMGN1-210ENST00000464078 NCF4Q15080 339 aa16.81■□□□□ 0.28
HMGN1-210ENST00000464078 VWA5B1Q5TIE3 1220 aa16.81■□□□□ 0.28
HMGN1-210ENST00000464078 BZW1Q7L1Q6 419 aaKnown RBP16.81■□□□□ 0.28
HMGN1-210ENST00000464078 RFX6Q8HWS3 928 aa16.81■□□□□ 0.28
HMGN1-210ENST00000464078 ZBTB2Q8N680 514 aa16.81■□□□□ 0.28
HMGN1-210ENST00000464078 OR1L3Q8NH93 324 aa16.81■□□□□ 0.28
HMGN1-210ENST00000464078 BLOC1S5Q8TDH9 187 aa16.81■□□□□ 0.28
HMGN1-210ENST00000464078 OXNAD1Q96HP4 312 aaPredicted RBP16.81■□□□□ 0.28
HMGN1-210ENST00000464078 ACTR5Q9H9F9 607 aaPredicted RBP16.81■□□□□ 0.28
HMGN1-210ENST00000464078 ERRFI1Q9UJM3 462 aaPredicted RBP16.81■□□□□ 0.28
HMGN1-210ENST00000464078 SLC9B1P1A6NJY1 282 aa16.8■□□□□ 0.28
HMGN1-210ENST00000464078 PRAMEF1O95521 474 aa16.8■□□□□ 0.28
HMGN1-210ENST00000464078 MSH3P20585 1137 aa16.8■□□□□ 0.28
HMGN1-210ENST00000464078 CDH3P22223 829 aa16.8■□□□□ 0.28
HMGN1-210ENST00000464078 UBASH3AP57075 661 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms