RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 SPEM1Q8N4L4 309 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 SEPT1Q8WYJ6 367 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 ORAI1Q96D31 301 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 KIF1BPQ96EK5 621 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 STAMBPL1Q96FJ0 436 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 PGAP3Q96FM1 320 aaPredicted RBP3.92□□□□□ -1.78
ITGB1-208ENST00000464001 ZNF354BQ96LW1 612 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 CCDC43Q96MW1 224 aaKnown RBP3.92□□□□□ -1.78
ITGB1-208ENST00000464001 DACH2Q96NX9 599 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 FSD1Q9BTV5 496 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 TKTL2Q9H0I9 626 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 HPF1Q9NWY4 346 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 DNAJB9Q9UBS3 223 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 SLC25A10Q9UBX3 287 aaPredicted RBP3.92□□□□□ -1.78
ITGB1-208ENST00000464001 SH3BGRL2Q9UJC5 107 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 MOSPD1Q9UJG1 213 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 CTAGE9A4FU28 777 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 URADA6NGE7 173 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 SMIM1B2RUZ4 78 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 H0YAE9 185 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 TNPO2O14787 897 aaKnown RBP3.91□□□□□ -1.78
ITGB1-208ENST00000464001 SPINT2O43291 252 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 SYNCRIPO60506 623 aaKnown RBP3.91□□□□□ -1.78
ITGB1-208ENST00000464001 CTAGE8P0CG41 777 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 GAP43P17677 238 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 ICAM3P32942 547 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 PSMB10P40306 273 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 AMPHP49418 695 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 GNAQP50148 359 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 RARSP54136 660 aaKnown RBP3.91□□□□□ -1.78
ITGB1-208ENST00000464001 ACTN3Q08043 901 aaPredicted RBP3.91□□□□□ -1.78
ITGB1-208ENST00000464001 PTP4A2Q12974 167 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 CAMK1Q14012 370 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 IRF3Q14653 427 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 MED22Q15528 200 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 WSCD2Q2TBF2 565 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 OR7E24Q6IFN5 339 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 FAM171BQ6P995 826 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 INO80CQ6PI98 192 aaPredicted RBP3.91□□□□□ -1.78
ITGB1-208ENST00000464001 CYP20A1Q6UW02 462 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 PLPPR4Q7Z2D5 763 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 CTAGE4Q8IX94 777 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 FRMD1Q8N878 549 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 TDRD5Q8NAT2 981 aaKnown RBP3.91□□□□□ -1.78
ITGB1-208ENST00000464001 ADAD2Q8NCV1 583 aaKnown RBP3.91□□□□□ -1.78
ITGB1-208ENST00000464001 ZNF540Q8NDQ6 660 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 NFKBIDQ8NI38 313 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 ETNPPLQ8TBG4 499 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 SCFD2Q8WU76 684 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 TM9SF4Q92544 642 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 EXOC4Q96A65 974 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 KLHL15Q96M94 604 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 ABHD1Q96SE0 405 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 PCYT2Q99447 389 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 LBHD1Q9BQE6 289 aaPredicted RBP3.91□□□□□ -1.78
ITGB1-208ENST00000464001 KLHL4Q9C0H6 718 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 RANBP17Q9H2T7 1088 aaKnown RBP3.91□□□□□ -1.78
ITGB1-208ENST00000464001 MMADHCQ9H3L0 296 aaPredicted RBP3.91□□□□□ -1.78
ITGB1-208ENST00000464001 ST6GALNAC4Q9H4F1 302 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 COPS7BQ9H9Q2 264 aaPredicted RBP3.91□□□□□ -1.78
ITGB1-208ENST00000464001 LIN28AQ9H9Z2 209 aaKnown RBP3.91□□□□□ -1.78
ITGB1-208ENST00000464001 ADPRHL2Q9NX46 363 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 PPP1R14DQ9NXH3 145 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.91□□□□□ -1.78
ITGB1-208ENST00000464001 KCNK7Q9Y2U2 307 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 CCL27Q9Y4X3 112 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 CEPT1Q9Y6K0 416 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 KDM3AQ9Y4C1 1321 aa3.91□□□□□ -1.78
ITGB1-208ENST00000464001 A0A0U1RQK1 487 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 ZNF320A2RRD8 509 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 USP17L23D6RBM5 183 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 DDX39AO00148 427 aaKnown RBP3.9□□□□□ -1.79
ITGB1-208ENST00000464001 KINO60870 393 aaKnown RBP3.9□□□□□ -1.79
ITGB1-208ENST00000464001 KERAO60938 352 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 STAM2O75886 525 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 GGPS1O95749 300 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 FTCDO95954 541 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 EGFP01133 1207 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 SPARCP09486 303 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 PATE4P0C8F1 98 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 FAM106CPP0CH98 169 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 HLA-DPA1P20036 260 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 EEF1DP29692 281 aaKnown RBP3.9□□□□□ -1.79
ITGB1-208ENST00000464001 DCTP40126 519 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 KLHL30Q0D2K2 578 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 ANKDD1AQ495B1 522 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 ERMARDQ5T6L9 678 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 ZC2HC1BQ5TFG8 222 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 ADALQ6DHV7 355 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 CAVIN1Q6NZI2 390 aaKnown RBP3.9□□□□□ -1.79
ITGB1-208ENST00000464001 TRAT1Q6PIZ9 186 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 ZNF704Q6ZNC4 412 aaPredicted RBP3.9□□□□□ -1.79
ITGB1-208ENST00000464001 PQLC2Q6ZP29 291 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 HAPLN4Q86UW8 402 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 LINC00346Q8IVM7 164 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 IPMKQ8NFU5 416 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 THAP6Q8TBB0 222 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 LINGO1Q96FE5 620 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 SIPA1Q96FS4 1042 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 RUNDC3BQ96NL0 473 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms