RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 DBN1Q16643 649 aa9.94□□□□□ -0.82
SF3A3-204ENST00000462258 KLHL35Q6PF15 583 aa9.94□□□□□ -0.82
SF3A3-204ENST00000462258 TAS2R42Q7RTR8 314 aa9.94□□□□□ -0.82
SF3A3-204ENST00000462258 PRUNE1Q86TP1 453 aa9.94□□□□□ -0.82
SF3A3-204ENST00000462258 PIANPQ8IYJ0 282 aa9.94□□□□□ -0.82
SF3A3-204ENST00000462258 CACNA2D3Q8IZS8 1091 aa9.94□□□□□ -0.82
SF3A3-204ENST00000462258 LILRA3Q8N6C8 439 aaPredicted RBP9.94□□□□□ -0.82
SF3A3-204ENST00000462258 ZSCAN1Q8NBB4 408 aa9.94□□□□□ -0.82
SF3A3-204ENST00000462258 GLIS1Q8NBF1 620 aa9.94□□□□□ -0.82
SF3A3-204ENST00000462258 SPDYE1Q8NFV5 336 aaPredicted RBP9.94□□□□□ -0.82
SF3A3-204ENST00000462258 NKD1Q969G9 470 aa9.94□□□□□ -0.82
SF3A3-204ENST00000462258 ZDHHC12Q96GR4 267 aa9.94□□□□□ -0.82
SF3A3-204ENST00000462258 CDKN2AIPNLQ96HQ2 116 aa9.94□□□□□ -0.82
SF3A3-204ENST00000462258 INSM2Q96T92 566 aaPredicted RBP9.94□□□□□ -0.82
SF3A3-204ENST00000462258 RAB33BQ9H082 229 aa9.94□□□□□ -0.82
SF3A3-204ENST00000462258 COG4Q9H9E3 785 aa9.94□□□□□ -0.82
SF3A3-204ENST00000462258 FBXO8Q9NRD0 319 aa9.94□□□□□ -0.82
SF3A3-204ENST00000462258 RAB6BQ9NRW1 208 aa9.94□□□□□ -0.82
SF3A3-204ENST00000462258 EPHA6Q9UF33 1036 aa9.94□□□□□ -0.82
SF3A3-204ENST00000462258 PPP2R2CQ9Y2T4 447 aa9.94□□□□□ -0.82
SF3A3-204ENST00000462258 CFAP46Q8IYW2 2715 aa9.94□□□□□ -0.82
SF3A3-204ENST00000462258 OR5K3A6NET4 321 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 MROH6A6NGR9 719 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 OR51F1A6NGY5 319 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 KIF1CO43896 1103 aaKnown RBP9.93□□□□□ -0.82
SF3A3-204ENST00000462258 STK17BO94768 372 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 FGGP02679 453 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 POLBP06746 335 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 APRTP07741 180 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 LIFP15018 202 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 NDUFS1P28331 727 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 FOXN2P32314 431 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 GRIA1P42261 906 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 SH3BP2P78314 561 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 ITIH4Q14624 930 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 GSE1Q14687 1217 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 CCNG2Q16589 344 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 SKIDA1Q1XH10 827 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 DNTTIP2Q5QJE6 756 aaKnown RBP9.93□□□□□ -0.82
SF3A3-204ENST00000462258 CACHD1Q5VU97 1274 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 AFTPHQ6ULP2 937 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 OOSP2Q86WS3 158 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 CFAP206Q8IYR0 622 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 NLGN4XQ8N0W4 816 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 NLGN4YQ8NFZ3 816 aaPredicted RBP9.93□□□□□ -0.82
SF3A3-204ENST00000462258 OR13J1Q8NGT2 312 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 MAIP1Q8WWC4 291 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.93□□□□□ -0.82
SF3A3-204ENST00000462258 WBP1Q96G27 269 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 OR6C1Q96RD1 312 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 RANBP9Q96S59 729 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 CCM2Q9BSQ5 444 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 TLR10Q9BXR5 811 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 KIR3DX1Q9H7L2 352 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 CASS4Q9NQ75 786 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 SLC24A2Q9UI40 661 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 PILRAQ9UKJ1 303 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 ZKSCAN5Q9Y2L8 839 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 HEBP2Q9Y5Z4 205 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 BAHCC1Q9P281 2608 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 BSNQ9UPA5 3926 aa9.93□□□□□ -0.82
SF3A3-204ENST00000462258 FASNP49327 2511 aaKnown RBP9.92□□□□□ -0.82
SF3A3-204ENST00000462258 C17orf113A0A1B0GUU1 675 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 CCDC162PA2VCL2 907 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 TLCD2A6NGC4 264 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 QSOX1O00391 747 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 IFRD1O00458 451 aaPredicted RBP9.92□□□□□ -0.82
SF3A3-204ENST00000462258 CEP104O60308 925 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 AP2A2O94973 939 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 DLGAP3O95886 979 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 GSTM1P09488 218 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 ZSCAN5DPP0CG00 497 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 PSMA3P25788 255 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 CXCR5P32302 372 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 NSG1P42857 185 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 PREPP48147 710 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 BASP1P80723 227 aaKnown RBP9.92□□□□□ -0.82
SF3A3-204ENST00000462258 GSTM4Q03013 218 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 LAMB3Q13751 1172 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 LY6DQ14210 128 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 KRT33BQ14525 404 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 ZNF658BQ4V348 819 aaPredicted RBP9.92□□□□□ -0.82
SF3A3-204ENST00000462258 TSTD2Q5T7W7 516 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 CAPRIN2Q6IMN6 1127 aaKnown RBP9.92□□□□□ -0.82
SF3A3-204ENST00000462258 CYB5D1Q6P9G0 228 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 DRICH1Q6PGQ1 229 aaPredicted RBP9.92□□□□□ -0.82
SF3A3-204ENST00000462258 PACS1Q6VY07 963 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 GSTA5Q7RTV2 222 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 CLDN19Q8N6F1 224 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 PPHLN1Q8NEY8 458 aaKnown RBP9.92□□□□□ -0.82
SF3A3-204ENST00000462258 ZFPM2Q8WW38 1151 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 KLHL6Q8WZ60 621 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 UBXN4Q92575 508 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 KIAA1143Q96AT1 154 aaPredicted RBP9.92□□□□□ -0.82
SF3A3-204ENST00000462258 CD180Q99467 661 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 ULBP3Q9BZM4 244 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 OR52A5Q9H2C5 316 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 EIF2B3Q9NR50 452 aaKnown RBP9.92□□□□□ -0.82
SF3A3-204ENST00000462258 SMARCAL1Q9NZC9 954 aa9.92□□□□□ -0.82
SF3A3-204ENST00000462258 SLC2A6Q9UGQ3 507 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms