RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 MALT1Q9UDY8 824 aa3.26□□□□□ -1.89
RFC4-211ENST00000460408 RALYQ9UKM9 306 aaKnown RBP3.26□□□□□ -1.89
RFC4-211ENST00000460408 ADGRL1O94910 1474 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 TEX13DA0A0J9YY54 714 aaPredicted RBP3.25□□□□□ -1.89
RFC4-211ENST00000460408 A0A1W2PPM1 405 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 TRBC2A0A5B9 178 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 H0YIN7 160 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 H7C0S8 307 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 SLC16A5O15375 505 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 BUD23O43709 281 aaKnown RBP3.25□□□□□ -1.89
RFC4-211ENST00000460408 SSX4O60224 188 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 OR10H2O60403 315 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 PRAMEF11O60813 436 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 C22orf31O95567 290 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 CPT2P23786 658 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 GNL1P36915 607 aaPredicted RBP3.25□□□□□ -1.89
RFC4-211ENST00000460408 CAPZA2P47755 286 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 ARCN1P48444 511 aaKnown RBP3.25□□□□□ -1.89
RFC4-211ENST00000460408 RAD23AP54725 363 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 CDH13P55290 713 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 EEF1A1P68104 462 aaKnown RBP3.25□□□□□ -1.89
RFC4-211ENST00000460408 PRPF4BQ13523 1007 aaKnown RBP3.25□□□□□ -1.89
RFC4-211ENST00000460408 SNAPC1Q16533 368 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 STXBP5Q5T5C0 1151 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 EEF1A1P5Q5VTE0 462 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 ZNF324BQ6AW86 544 aaPredicted RBP3.25□□□□□ -1.89
RFC4-211ENST00000460408 OR7E24Q6IFN5 339 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 FIGLAQ6QHK4 219 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 RBPMS2Q6ZRY4 209 aaKnown RBP3.25□□□□□ -1.89
RFC4-211ENST00000460408 TUBA1AQ71U36 451 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 CAMKMTQ7Z624 323 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 SFR1Q86XK3 245 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 AFAP1Q8N556 730 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 GBGT1Q8N5D6 347 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 XXYLT1Q8NBI6 393 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 PAPD5Q8NDF8 572 aaKnown RBP3.25□□□□□ -1.89
RFC4-211ENST00000460408 LMO3Q8TAP4 145 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 PPP4R1Q8TF05 950 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 SMPDL3BQ92485 455 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 RADILQ96JH8 1075 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 PRMT6Q96LA8 375 aaPredicted RBP3.25□□□□□ -1.89
RFC4-211ENST00000460408 LINC00615Q96LM1 132 aaPredicted RBP3.25□□□□□ -1.89
RFC4-211ENST00000460408 ZNF830Q96NB3 372 aaPredicted RBP3.25□□□□□ -1.89
RFC4-211ENST00000460408 IL17FQ96PD4 163 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 OR6C1Q96RD1 312 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 BAG1Q99933 345 aaPredicted RBP3.25□□□□□ -1.89
RFC4-211ENST00000460408 TUBA1CQ9BQE3 449 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 NEURL2Q9BR09 285 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 C1QTNF4Q9BXJ3 329 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 MOV10L1Q9BXT6 1211 aaKnown RBP3.25□□□□□ -1.89
RFC4-211ENST00000460408 ANKRD2Q9GZV1 360 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 GOLPH3LQ9H4A5 285 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 RABEP2Q9H5N1 569 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 ANKZF1Q9H8Y5 726 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 EQTNQ9NQ60 294 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 CCDC177Q9NQR7 707 aaPredicted RBP3.25□□□□□ -1.89
RFC4-211ENST00000460408 HAO2Q9NYQ3 351 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 CFDP1Q9UEE9 299 aaPredicted RBP3.25□□□□□ -1.89
RFC4-211ENST00000460408 YIPF1Q9Y548 306 aa3.25□□□□□ -1.89
RFC4-211ENST00000460408 CEP164Q9UPV0 1460 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 SAA2-SAA4A0A096LPE2 208 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 A0A1B0GUV1 79 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 PRSS51A0A1B0GVH4 220 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 TMEM221A6NGB7 291 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 URADA6NGE7 173 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 MED24O75448 989 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 LDLRP01130 860 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 DANCRP0C864 163 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 MYBL1P10243 752 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 GJA1P17302 382 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 DNASE1P24855 282 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 AHRP35869 848 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 MMP15P51511 669 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 HNRNPKP61978 463 aaKnown RBP eCLIP3.24□□□□□ -1.89
RFC4-211ENST00000460408 CDK3Q00526 305 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 EEF1A2Q05639 463 aaKnown RBP3.24□□□□□ -1.89
RFC4-211ENST00000460408 COASYQ13057 564 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 NR1D2Q14995 579 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 SLC39A14Q15043 492 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 TCP11X2Q5H9J9 407 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 GCNT6Q5T4J0 391 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 GRTP1Q5TC63 336 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 PLXDC2Q6UX71 529 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 GSG1LQ6UXU4 331 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 UNQ6126/PRO20091Q6UXV3 157 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 PLEKHM3Q6ZWE6 761 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 TICAM2Q86XR7 235 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 NAGSQ8N159 534 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 MUC20Q8N307 709 aaPredicted RBP3.24□□□□□ -1.89
RFC4-211ENST00000460408 TSPAN14Q8NG11 270 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 OR2AJ1Q8NGZ0 328 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 SPACA9Q96E40 222 aaPredicted RBP3.24□□□□□ -1.89
RFC4-211ENST00000460408 IGSF21Q96ID5 467 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 CNDP2Q96KP4 475 aaKnown RBP3.24□□□□□ -1.89
RFC4-211ENST00000460408 SLX1AQ9BQ83 275 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 ABHD6Q9BV23 337 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 HHATLQ9HCP6 504 aa3.24□□□□□ -1.89
RFC4-211ENST00000460408 PRMT7Q9NVM4 692 aaPredicted RBP3.24□□□□□ -1.89
RFC4-211ENST00000460408 NPAP1Q9NZP6 1156 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms