RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 PRELID2Q8N945 189 aa22.48■■□□□ 1.19
PTPN4-208ENST00000460289 PPHLN1Q8NEY8 458 aaKnown RBP22.48■■□□□ 1.19
PTPN4-208ENST00000460289 OR13J1Q8NGT2 312 aa22.48■■□□□ 1.19
PTPN4-208ENST00000460289 HDAC10Q969S8 669 aa22.48■■□□□ 1.19
PTPN4-208ENST00000460289 UBL7Q96S82 380 aaPredicted RBP22.48■■□□□ 1.19
PTPN4-208ENST00000460289 NAP1L3Q99457 506 aaPredicted RBP22.48■■□□□ 1.19
PTPN4-208ENST00000460289 ZPBPQ9BS86 351 aa22.48■■□□□ 1.19
PTPN4-208ENST00000460289 SMARCAL1Q9NZC9 954 aa22.48■■□□□ 1.19
PTPN4-208ENST00000460289 TTC7AQ9ULT0 858 aaPredicted RBP22.48■■□□□ 1.19
PTPN4-208ENST00000460289 HEBP2Q9Y5Z4 205 aa22.48■■□□□ 1.19
PTPN4-208ENST00000460289 NDUFS1P28331 727 aa22.47■■□□□ 1.19
PTPN4-208ENST00000460289 ACVR1Q04771 509 aa22.47■■□□□ 1.19
PTPN4-208ENST00000460289 KRT33BQ14525 404 aa22.47■■□□□ 1.19
PTPN4-208ENST00000460289 PLCL1Q15111 1095 aa22.47■■□□□ 1.19
PTPN4-208ENST00000460289 TGIF1Q15583 401 aa22.47■■□□□ 1.19
PTPN4-208ENST00000460289 PCID2Q5JVF3 399 aa22.47■■□□□ 1.19
PTPN4-208ENST00000460289 ARHGAP40Q5TG30 622 aa22.47■■□□□ 1.19
PTPN4-208ENST00000460289 AFTPHQ6ULP2 937 aa22.47■■□□□ 1.19
PTPN4-208ENST00000460289 CEACAM20Q6UY09 585 aa22.47■■□□□ 1.19
PTPN4-208ENST00000460289 CERS6Q6ZMG9 384 aa22.47■■□□□ 1.19
PTPN4-208ENST00000460289 CLDN19Q8N6F1 224 aa22.47■■□□□ 1.19
PTPN4-208ENST00000460289 GPR150Q8NGU9 434 aa22.47■■□□□ 1.19
PTPN4-208ENST00000460289 SNRNP27Q8WVK2 155 aaKnown RBP22.47■■□□□ 1.19
PTPN4-208ENST00000460289 RSC1A1Q92681 617 aa22.47■■□□□ 1.19
PTPN4-208ENST00000460289 TCAF1Q9Y4C2 921 aa22.47■■□□□ 1.19
PTPN4-208ENST00000460289 B3GALT1Q9Y5Z6 326 aa22.47■■□□□ 1.19
PTPN4-208ENST00000460289 CFAP20Q9Y6A4 193 aaKnown RBP22.47■■□□□ 1.19
PTPN4-208ENST00000460289 RASSF9O75901 435 aa22.46■■□□□ 1.19
PTPN4-208ENST00000460289 FOXN2P32314 431 aa22.46■■□□□ 1.19
PTPN4-208ENST00000460289 PPARGP37231 505 aaPredicted RBP22.46■■□□□ 1.19
PTPN4-208ENST00000460289 NPY2RP49146 381 aa22.46■■□□□ 1.19
PTPN4-208ENST00000460289 CDK16Q00536 496 aa22.46■■□□□ 1.19
PTPN4-208ENST00000460289 RPA4Q13156 261 aa22.46■■□□□ 1.19
PTPN4-208ENST00000460289 XKR5Q6UX68 686 aa22.46■■□□□ 1.19
PTPN4-208ENST00000460289 PACS1Q6VY07 963 aa22.46■■□□□ 1.19
PTPN4-208ENST00000460289 SPDYE1Q8NFV5 336 aaPredicted RBP22.46■■□□□ 1.19
PTPN4-208ENST00000460289 OR6P1Q8NGX9 317 aa22.46■■□□□ 1.19
PTPN4-208ENST00000460289 OR4L1Q8NH43 312 aa22.46■■□□□ 1.19
PTPN4-208ENST00000460289 SGSM3Q96HU1 749 aa22.46■■□□□ 1.19
PTPN4-208ENST00000460289 COG4Q9H9E3 785 aa22.46■■□□□ 1.19
PTPN4-208ENST00000460289 BFARQ9NZS9 450 aa22.46■■□□□ 1.19
PTPN4-208ENST00000460289 SLC2A6Q9UGQ3 507 aa22.46■■□□□ 1.19
PTPN4-208ENST00000460289 AHCTF1Q8WYP5 2266 aa22.45■■□□□ 1.18
PTPN4-208ENST00000460289 OR51F1A6NGY5 319 aa22.45■■□□□ 1.18
PTPN4-208ENST00000460289 F8W8V4 182 aa22.45■■□□□ 1.18
PTPN4-208ENST00000460289 K7ENP7 123 aa22.45■■□□□ 1.18
PTPN4-208ENST00000460289 IFRD1O00458 451 aaPredicted RBP22.45■■□□□ 1.18
PTPN4-208ENST00000460289 POLR1CO15160 346 aaPredicted RBP22.45■■□□□ 1.18
PTPN4-208ENST00000460289 KIF5CO60282 957 aa22.45■■□□□ 1.18
PTPN4-208ENST00000460289 GOT2P00505 430 aaKnown RBP22.45■■□□□ 1.18
PTPN4-208ENST00000460289 LEPRP48357 1165 aaKnown RBP22.45■■□□□ 1.18
PTPN4-208ENST00000460289 CD151P48509 253 aa22.45■■□□□ 1.18
PTPN4-208ENST00000460289 SESN2P58004 480 aaPredicted RBP22.45■■□□□ 1.18
PTPN4-208ENST00000460289 PRAMEP78395 509 aa22.45■■□□□ 1.18
PTPN4-208ENST00000460289 MANEAQ5SRI9 462 aa22.45■■□□□ 1.18
PTPN4-208ENST00000460289 ANKS6Q68DC2 871 aa22.45■■□□□ 1.18
PTPN4-208ENST00000460289 IRGCQ6NXR0 463 aa22.45■■□□□ 1.18
PTPN4-208ENST00000460289 INO80CQ6PI98 192 aaPredicted RBP22.45■■□□□ 1.18
PTPN4-208ENST00000460289 PRSS42Q7Z5A4 293 aa22.45■■□□□ 1.18
PTPN4-208ENST00000460289 LILRA3Q8N6C8 439 aaPredicted RBP22.45■■□□□ 1.18
PTPN4-208ENST00000460289 MAGOHBQ96A72 148 aaKnown RBP22.45■■□□□ 1.18
PTPN4-208ENST00000460289 RMDN2Q96LZ7 410 aa22.45■■□□□ 1.18
PTPN4-208ENST00000460289 ZNF778Q96MU6 729 aa22.45■■□□□ 1.18
PTPN4-208ENST00000460289 IL22Q9GZX6 179 aa22.45■■□□□ 1.18
PTPN4-208ENST00000460289 ZNF768Q9H5H4 540 aaKnown RBP22.45■■□□□ 1.18
PTPN4-208ENST00000460289 KIR3DX1Q9H7L2 352 aa22.45■■□□□ 1.18
PTPN4-208ENST00000460289 CHRAC1Q9NRG0 131 aa22.45■■□□□ 1.18
PTPN4-208ENST00000460289 FTH1P02794 183 aa22.44■■□□□ 1.18
PTPN4-208ENST00000460289 OR56A5P0C7T3 313 aa22.44■■□□□ 1.18
PTPN4-208ENST00000460289 TPSB2P20231 275 aa22.44■■□□□ 1.18
PTPN4-208ENST00000460289 ATP1A2P50993 1020 aa22.44■■□□□ 1.18
PTPN4-208ENST00000460289 SARNPP82979 210 aaKnown RBP22.44■■□□□ 1.18
PTPN4-208ENST00000460289 RHDQ02161 417 aa22.44■■□□□ 1.18
PTPN4-208ENST00000460289 TPSAB1Q15661 275 aa22.44■■□□□ 1.18
PTPN4-208ENST00000460289 SOWAHCQ53LP3 525 aaPredicted RBP22.44■■□□□ 1.18
PTPN4-208ENST00000460289 FASTKD1Q53R41 847 aaKnown RBP22.44■■□□□ 1.18
PTPN4-208ENST00000460289 CACHD1Q5VU97 1274 aa22.44■■□□□ 1.18
PTPN4-208ENST00000460289 MICALCLQ6ZW33 695 aa22.44■■□□□ 1.18
PTPN4-208ENST00000460289 PMEPA1Q969W9 287 aa22.44■■□□□ 1.18
PTPN4-208ENST00000460289 MS4A14Q96JA4 679 aa22.44■■□□□ 1.18
PTPN4-208ENST00000460289 SLC24A2Q9UI40 661 aa22.44■■□□□ 1.18
PTPN4-208ENST00000460289 ANAPC5Q9UJX4 755 aa22.44■■□□□ 1.18
PTPN4-208ENST00000460289 LIN7AO14910 233 aaPredicted RBP22.43■■□□□ 1.18
PTPN4-208ENST00000460289 SEPHS1P49903 392 aa22.43■■□□□ 1.18
PTPN4-208ENST00000460289 ZNF658BQ4V348 819 aaPredicted RBP22.43■■□□□ 1.18
PTPN4-208ENST00000460289 AARS2Q5JTZ9 985 aaKnown RBP22.43■■□□□ 1.18
PTPN4-208ENST00000460289 DUS1LQ6P1R4 473 aaKnown RBP22.43■■□□□ 1.18
PTPN4-208ENST00000460289 LRRC8BQ6P9F7 803 aa22.43■■□□□ 1.18
PTPN4-208ENST00000460289 FAM92BQ6ZTR7 304 aa22.43■■□□□ 1.18
PTPN4-208ENST00000460289 OOSP2Q86WS3 158 aa22.43■■□□□ 1.18
PTPN4-208ENST00000460289 SLC35F6Q8N357 371 aa22.43■■□□□ 1.18
PTPN4-208ENST00000460289 LSM14AQ8ND56 463 aaKnown RBP22.43■■□□□ 1.18
PTPN4-208ENST00000460289 JPH3Q8WXH2 748 aaPredicted RBP22.43■■□□□ 1.18
PTPN4-208ENST00000460289 KLHL6Q8WZ60 621 aa22.43■■□□□ 1.18
PTPN4-208ENST00000460289 UBXN4Q92575 508 aa22.43■■□□□ 1.18
PTPN4-208ENST00000460289 CTRCQ99895 268 aa22.43■■□□□ 1.18
PTPN4-208ENST00000460289 AP1M1Q9BXS5 423 aa22.43■■□□□ 1.18
PTPN4-208ENST00000460289 OR52A5Q9H2C5 316 aa22.43■■□□□ 1.18
PTPN4-208ENST00000460289 KCNF1Q9H3M0 494 aa22.43■■□□□ 1.18
PTPN4-208ENST00000460289 HRASLS2Q9NWW9 162 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms