RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 NELFEP18615 380 aaKnown RBP16.29■□□□□ 0.2
TMEM50B-205ENST00000459909 XRCC1P18887 633 aaPredicted RBP16.29■□□□□ 0.2
TMEM50B-205ENST00000459909 RBL1P28749 1068 aa16.29■□□□□ 0.2
TMEM50B-205ENST00000459909 PTGIRP43119 386 aa16.29■□□□□ 0.2
TMEM50B-205ENST00000459909 ELOAQ14241 798 aaKnown RBP16.29■□□□□ 0.2
TMEM50B-205ENST00000459909 ARMC12Q5T9G4 340 aa16.29■□□□□ 0.2
TMEM50B-205ENST00000459909 CACHD1Q5VU97 1274 aa16.29■□□□□ 0.2
TMEM50B-205ENST00000459909 FAM199XQ6PEV8 388 aaPredicted RBP16.29■□□□□ 0.2
TMEM50B-205ENST00000459909 PHYKPLQ8IUZ5 450 aa16.29■□□□□ 0.2
TMEM50B-205ENST00000459909 NDUFAF2Q8N183 169 aa16.29■□□□□ 0.2
TMEM50B-205ENST00000459909 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.29■□□□□ 0.2
TMEM50B-205ENST00000459909 ACTRT1Q8TDG2 376 aa16.29■□□□□ 0.2
TMEM50B-205ENST00000459909 PLEKHG4BQ96PX9 1271 aa16.29■□□□□ 0.2
TMEM50B-205ENST00000459909 NUDT9Q9BW91 350 aa16.29■□□□□ 0.2
TMEM50B-205ENST00000459909 AP1M1Q9BXS5 423 aa16.29■□□□□ 0.2
TMEM50B-205ENST00000459909 CEP41Q9BYV8 373 aa16.29■□□□□ 0.2
TMEM50B-205ENST00000459909 FRMD8P1Q9BZ68 369 aaPredicted RBP16.29■□□□□ 0.2
TMEM50B-205ENST00000459909 AKIRIN1Q9H9L7 192 aaPredicted RBP16.29■□□□□ 0.2
TMEM50B-205ENST00000459909 RARRES3Q9UL19 164 aa16.29■□□□□ 0.2
TMEM50B-205ENST00000459909 DNPEPQ9ULA0 475 aa16.29■□□□□ 0.2
TMEM50B-205ENST00000459909 TTC7AQ9ULT0 858 aaPredicted RBP16.29■□□□□ 0.2
TMEM50B-205ENST00000459909 FARSAQ9Y285 508 aaKnown RBP16.29■□□□□ 0.2
TMEM50B-205ENST00000459909 POLQO75417 2590 aa16.29■□□□□ 0.2
TMEM50B-205ENST00000459909 PRRC2CQ9Y520 2896 aaKnown RBP16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 A0A0U1RQS6 177 aa16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 KCNN4O15554 427 aa16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 LIASO43766 372 aa16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 KIF1CO43896 1103 aaKnown RBP16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 STK10O94804 968 aaKnown RBP16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 VIPP01282 170 aa16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 TUBB4AP04350 444 aa16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 ZNF30P17039 623 aa16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 PAFAH1B1P43034 410 aa16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 CLCNKAP51800 687 aa16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 ITGA1P56199 1179 aa16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 MAXP61244 160 aa16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 IFI35P80217 286 aaPredicted RBP16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 PDE1BQ01064 536 aa16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 PTSQ03393 145 aa16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 ZBTB17Q13105 803 aa16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 SIX1Q15475 284 aaPredicted RBP16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 RALGPS1Q5JS13 557 aa16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 PWWP2BQ6NUJ5 590 aa16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 BPHLQ86WA6 291 aaPredicted RBP16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 TEX26Q8N6G2 289 aa16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 SLC35B2Q8TB61 432 aa16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 PIH1D2Q8WWB5 315 aa16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 ZDHHC12Q96GR4 267 aa16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 AGAP3Q96P47 875 aa16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 MGME1Q9BQP7 344 aa16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 RIOK2Q9BVS4 552 aaKnown RBP16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 HOMER3Q9NSC5 361 aa16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 ZNF148Q9UQR1 794 aa16.28■□□□□ 0.2
TMEM50B-205ENST00000459909 GOLGA6L10A0A0M3HER8 536 aa16.27■□□□□ 0.2
TMEM50B-205ENST00000459909 TMEM63AO94886 807 aa16.27■□□□□ 0.2
TMEM50B-205ENST00000459909 CAPZBP47756 277 aa16.27■□□□□ 0.2
TMEM50B-205ENST00000459909 TUBB3Q13509 450 aa16.27■□□□□ 0.2
TMEM50B-205ENST00000459909 CCNG2Q16589 344 aa16.27■□□□□ 0.2
TMEM50B-205ENST00000459909 FAM182AQ5T1J6 154 aa16.27■□□□□ 0.2
TMEM50B-205ENST00000459909 TRIM48Q8IWZ4 208 aa16.27■□□□□ 0.2
TMEM50B-205ENST00000459909 RAVER1Q8IY67 606 aaKnown RBP16.27■□□□□ 0.2
TMEM50B-205ENST00000459909 PGBD5Q8N414 524 aa16.27■□□□□ 0.2
TMEM50B-205ENST00000459909 ADAMTS17Q8TE56 1095 aa16.27■□□□□ 0.2
TMEM50B-205ENST00000459909 SMAD5Q99717 465 aaKnown RBP16.27■□□□□ 0.2
TMEM50B-205ENST00000459909 TMEM121Q9BTD3 319 aa16.27■□□□□ 0.2
TMEM50B-205ENST00000459909 UNKQ9C0B0 810 aaKnown RBP16.27■□□□□ 0.2
TMEM50B-205ENST00000459909 POLR1EQ9GZS1 481 aaKnown RBP16.27■□□□□ 0.2
TMEM50B-205ENST00000459909 GPR83Q9NYM4 423 aa16.27■□□□□ 0.2
TMEM50B-205ENST00000459909 KLHL8Q9P2G9 620 aaPredicted RBP16.27■□□□□ 0.2
TMEM50B-205ENST00000459909 EPHA6Q9UF33 1036 aa16.27■□□□□ 0.2
TMEM50B-205ENST00000459909 CNOT6Q9ULM6 557 aaKnown RBP16.27■□□□□ 0.2
TMEM50B-205ENST00000459909 GRID2O43424 1007 aa16.26■□□□□ 0.19
TMEM50B-205ENST00000459909 ZNF189O75820 626 aaPredicted RBP16.26■□□□□ 0.19
TMEM50B-205ENST00000459909 URI1O94763 535 aaPredicted RBP16.26■□□□□ 0.19
TMEM50B-205ENST00000459909 HLA-DQB2P05538 268 aa16.26■□□□□ 0.19
TMEM50B-205ENST00000459909 PTPN3P26045 913 aa16.26■□□□□ 0.19
TMEM50B-205ENST00000459909 WASHC5Q12768 1159 aa16.26■□□□□ 0.19
TMEM50B-205ENST00000459909 KRTAP21-3Q3LHN1 58 aa16.26■□□□□ 0.19
TMEM50B-205ENST00000459909 PLEKHN1Q494U1 663 aaPredicted RBP16.26■□□□□ 0.19
TMEM50B-205ENST00000459909 TEX44Q53QW1 395 aa16.26■□□□□ 0.19
TMEM50B-205ENST00000459909 FAM92BQ6ZTR7 304 aa16.26■□□□□ 0.19
TMEM50B-205ENST00000459909 PID1Q7Z2X4 250 aa16.26■□□□□ 0.19
TMEM50B-205ENST00000459909 CISD2Q8N5K1 135 aaKnown RBP16.26■□□□□ 0.19
TMEM50B-205ENST00000459909 PRELID2Q8N945 189 aa16.26■□□□□ 0.19
TMEM50B-205ENST00000459909 GLIS1Q8NBF1 620 aa16.26■□□□□ 0.19
TMEM50B-205ENST00000459909 SIDT2Q8NBJ9 832 aaKnown RBP16.26■□□□□ 0.19
TMEM50B-205ENST00000459909 RSC1A1Q92681 617 aa16.26■□□□□ 0.19
TMEM50B-205ENST00000459909 RANBP9Q96S59 729 aa16.26■□□□□ 0.19
TMEM50B-205ENST00000459909 RUBCNLQ9H714 662 aa16.26■□□□□ 0.19
TMEM50B-205ENST00000459909 SCHIP1Q9P0W5 487 aaPredicted RBP16.26■□□□□ 0.19
TMEM50B-205ENST00000459909 AMACRQ9UHK6 382 aa16.26■□□□□ 0.19
TMEM50B-205ENST00000459909 NUAK1O60285 661 aa16.25■□□□□ 0.19
TMEM50B-205ENST00000459909 SLC19A1P41440 591 aa16.25■□□□□ 0.19
TMEM50B-205ENST00000459909 STC1P52823 247 aa16.25■□□□□ 0.19
TMEM50B-205ENST00000459909 DSC2Q02487 901 aa16.25■□□□□ 0.19
TMEM50B-205ENST00000459909 ACY1Q03154 408 aa16.25■□□□□ 0.19
TMEM50B-205ENST00000459909 CDK18Q07002 472 aa16.25■□□□□ 0.19
TMEM50B-205ENST00000459909 IZUMO3Q5VZ72 239 aa16.25■□□□□ 0.19
TMEM50B-205ENST00000459909 IRGCQ6NXR0 463 aa16.25■□□□□ 0.19
TMEM50B-205ENST00000459909 CREG2Q8IUH2 290 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms