RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 ZDHHC13Q8IUH4 622 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 EPHX4Q8IUS5 362 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 FAM217AQ8IXS0 508 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 CMTR2Q8IYT2 770 aaKnown RBP8.71□□□□□ -1.02
HDAC3-202ENST00000459727 ELMOD1Q8N336 334 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 SFRP1Q8N474 314 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 ZBTB2Q8N680 514 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 PAF1Q8N7H5 531 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 CDYL2Q8N8U2 506 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 ZNF555Q8NEP9 628 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 ZNF461Q8TAF7 563 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 DNAJB14Q8TBM8 379 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 PROKR1Q8TCW9 393 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 BPIFB1Q8TDL5 484 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 ISG20Q96AZ6 181 aaKnown RBP8.71□□□□□ -1.02
HDAC3-202ENST00000459727 AURKBQ96GD4 344 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-202ENST00000459727 SLC29A1Q99808 456 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 NTMT1Q9BV86 223 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 CFHR5Q9BXR6 569 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 HIPK3Q9H422 1215 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 ATP13A3Q9H7F0 1226 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 ZFYVE1Q9HBF4 777 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 HPS4Q9NQG7 708 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 SMOXQ9NWM0 555 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 KCTD5Q9NXV2 234 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 WWOXQ9NZC7 414 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 EGFL7Q9UHF1 273 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 TIMM22Q9Y584 194 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 ORC6Q9Y5N6 252 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 ST14Q9Y5Y6 855 aa8.71□□□□□ -1.02
HDAC3-202ENST00000459727 SERTM1A2A2V5 107 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 ASPDHA6ND91 283 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 LRRC14BA6NHZ5 514 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 NCF1BA6NI72 391 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-202ENST00000459727 TBKBP1A7MCY6 615 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 NCF1CA8MVU1 366 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-202ENST00000459727 FAM220BPB1ANY3 271 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 NPIPB8E9PQR5 432 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 QSOX1O00391 747 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 EI24O14681 340 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 SLC16A5O15375 505 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 PRMT3O60678 531 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 ULK1O75385 1050 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 PRAMEF1O95521 474 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 C8GP07360 202 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 ANXA5P08758 320 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 NCF1P14598 390 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-202ENST00000459727 EPB42P16452 691 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 JUNBP17275 347 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-202ENST00000459727 ACRV1P26436 265 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 DCKP27707 260 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 NSG1P42857 185 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 AGTR2P50052 363 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 HNMTP50135 292 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 EPHB3P54753 998 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 HPCAP84074 193 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 TRIM32Q13049 653 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 TRAF3Q13114 568 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 NOGQ13253 232 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 NFATC2Q13469 925 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 DAG1Q14118 895 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 MAPKAPK3Q16644 382 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 PLA2G4EQ3MJ16 856 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 RABL3Q5HYI8 236 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 LETMD1Q6P1Q0 360 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 SBSNQ6UWP8 590 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 USP51Q70EK9 711 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 USP45Q70EL2 814 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 SERPINA9Q86WD7 417 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 ADHFE1Q8IWW8 467 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 PIANPQ8IYJ0 282 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 KIAA2013Q8IYS2 634 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 RNF168Q8IYW5 571 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-202ENST00000459727 EID3Q8N140 333 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 CPXM2Q8N436 756 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 SLAIN1Q8ND83 568 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 OR2T12Q8NG77 320 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 OR4F6Q8NGB9 312 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 FAM81AQ8TBF8 368 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 RAET1EQ8TD07 263 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 MIPOL1Q8TD10 442 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 CYGBQ8WWM9 190 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 BIRC7Q96CA5 298 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 METTL2AQ96IZ6 378 aaKnown RBP8.7□□□□□ -1.02
HDAC3-202ENST00000459727 LYSMD1Q96S90 227 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 DOK1Q99704 481 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 EGFL8Q99944 293 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 RBM4BQ9BQ04 359 aaKnown RBP8.7□□□□□ -1.02
HDAC3-202ENST00000459727 BCL7BQ9BQE9 202 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 C17orf80Q9BSJ5 609 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 FEM1AQ9BSK4 669 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 RBM4Q9BWF3 364 aaKnown RBP8.7□□□□□ -1.02
HDAC3-202ENST00000459727 CHID1Q9BWS9 393 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 EMILIN2Q9BXX0 1053 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 CD244Q9BZW8 370 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 DPY30Q9C005 99 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 ING2Q9H160 280 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 IPPKQ9H8X2 491 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 PLGRKTQ9HBL7 147 aa8.7□□□□□ -1.02
HDAC3-202ENST00000459727 HMX1Q9NP08 348 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms