RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 LCN1P1Q5VSP4 162 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 KLHL35Q6PF15 583 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 TTC29Q8NA56 475 aaPredicted RBP19.42■□□□□ 0.7
SNX27-204ENST00000458013 TRPV5Q9NQA5 729 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 CABYRO75952 493 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 VLDLRP98155 873 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 CHIT1Q13231 466 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 UBXN11Q5T124 520 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 CCNB2O95067 398 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 CCNE2O96020 404 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 ALDH3A2P51648 485 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 ILF2Q12905 390 aaKnown RBP19.41■□□□□ 0.7
SNX27-204ENST00000458013 AMZ1Q400G9 498 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 AAGABQ6PD74 315 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 RAB43Q86YS6 212 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 GTF2IRD1Q9UHL9 959 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 CDKL1Q00532 357 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 PDE12Q6L8Q7 609 aaKnown RBP19.41■□□□□ 0.7
SNX27-204ENST00000458013 FSTL4Q6MZW2 842 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 POTEHQ6S545 545 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 DEFB119Q8N690 84 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 SLC25A36Q96CQ1 311 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 PCED1BQ96HM7 432 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 PRDM16Q9HAZ2 1276 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 CORO1CQ9ULV4 474 aaPredicted RBP19.41■□□□□ 0.7
SNX27-204ENST00000458013 CFAP20Q9Y6A4 193 aaKnown RBP19.41■□□□□ 0.7
SNX27-204ENST00000458013 LAMP2P13473 410 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 GLUD2P49448 558 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 ODF4Q2M2E3 257 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 PPTC7Q8NI37 304 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 ZFP3Q96NJ6 502 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 MARK1Q9P0L2 795 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 SALL4Q9UJQ4 1053 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 PTCH2Q9Y6C5 1203 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 PGLSO95336 258 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 FTHL17Q9BXU8 183 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 COQ10BQ9H8M1 238 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 COMMD3Q9UBI1 195 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 TCAF1Q9Y4C2 921 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 LOC100509620A0A075B734 347 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 SMIM30A4D0T7 59 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 SLC15A5A6NIM6 579 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 PSKH1P11801 424 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 FAUP35544 74 aaKnown RBP19.41■□□□□ 0.7
SNX27-204ENST00000458013 CDKN2BP42772 138 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 CSTF1Q05048 431 aaKnown RBP19.41■□□□□ 0.7
SNX27-204ENST00000458013 CYP27C1Q4G0S4 372 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 TOR1AIP1Q5JTV8 583 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 USP30Q70CQ3 517 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 TAC4Q86UU9 113 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 FKBP7Q9Y680 259 aa19.41■□□□□ 0.7
SNX27-204ENST00000458013 ARL5CA6NH57 179 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 TSHRP16473 764 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 RPS9P46781 194 aaKnown RBP19.4■□□□□ 0.7
SNX27-204ENST00000458013 E2F2Q14209 437 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 PUM1Q14671 1186 aaKnown RBP eCLIP19.4■□□□□ 0.7
SNX27-204ENST00000458013 TCAIMQ8N3R3 496 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 CCDC59Q9P031 241 aaKnown RBP19.4■□□□□ 0.7
SNX27-204ENST00000458013 CILPO75339 1184 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 ZNF8P17098 575 aaPredicted RBP19.4■□□□□ 0.7
SNX27-204ENST00000458013 NAA20P61599 178 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 BNC1Q01954 994 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 MKL1Q969V6 931 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 MTERF1Q99551 399 aaKnown RBP19.4■□□□□ 0.7
SNX27-204ENST00000458013 MNTQ99583 582 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 PCDHAC1Q9H158 963 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 NME6O75414 186 aaPredicted RBP19.4■□□□□ 0.7
SNX27-204ENST00000458013 ADRA1BP35368 520 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 MAZP56270 477 aaKnown RBP19.4■□□□□ 0.7
SNX27-204ENST00000458013 BRMS1LQ5PSV4 323 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 FBXL16Q8N461 479 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 TSPAN1O60635 241 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 SCGB1D2O95969 90 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 FLT3LGP49771 235 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 LAPTM5Q13571 262 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 DNASE1L3Q13609 305 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 RIC1Q4ADV7 1423 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 GPR153Q6NV75 609 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 PTF1AQ7RTS3 328 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 ZZZ3Q8IYH5 903 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 OR10Q1Q8NGQ4 319 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 IFT27Q9BW83 186 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 EIF3KQ9UBQ5 218 aaKnown RBP19.4■□□□□ 0.7
SNX27-204ENST00000458013 LRRC10BA6NIK2 292 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 ZNF208O43345 1280 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 AIREO43918 545 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 DHFRP00374 187 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 PBX3P40426 434 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 RAB2AP61019 212 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 METTL21AQ8WXB1 218 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 COQ8BQ96D53 544 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 CCNB1IP1Q9NPC3 277 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 RIMKLBQ9ULI2 386 aa19.4■□□□□ 0.7
SNX27-204ENST00000458013 WRBO00258 174 aa19.39■□□□□ 0.7
SNX27-204ENST00000458013 CREB1P16220 341 aa19.39■□□□□ 0.7
SNX27-204ENST00000458013 TNFAIP8L1Q8WVP5 186 aa19.39■□□□□ 0.7
SNX27-204ENST00000458013 EVA1BQ9NVM1 165 aa19.39■□□□□ 0.7
SNX27-204ENST00000458013 CXCR6O00574 342 aa19.39■□□□□ 0.69
SNX27-204ENST00000458013 CHST10O43529 356 aa19.39■□□□□ 0.69
SNX27-204ENST00000458013 LRCH4O75427 683 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms