RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 DUSP10Q9Y6W6 482 aa15.41■□□□□ 0.06
CHCHD3-204ENST00000457942 A1L4Q6 167 aa15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 GOLGA6L9A6NEM1 432 aa15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 C5orf60A6NFR6 353 aa15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 K7EM74 188 aa15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 GAPDHSO14556 408 aaPredicted RBP15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 SRP72O76094 671 aaKnown RBP15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 KIAA0754O94854 1291 aa15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 AGFG2O95081 481 aa15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 SLC35G4P0C7Q5 338 aa15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 MTHFD1P11586 935 aaKnown RBP15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 TCN2P20062 427 aa15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 ITGALP20701 1170 aa15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 PTPN7P35236 360 aa15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 DLSTP36957 453 aa15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 STAT5AP42229 794 aa15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 PPP1CAP62136 330 aa15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 PDE1BQ01064 536 aa15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 KRT33BQ14525 404 aa15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 IL11RAQ14626 422 aa15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 GSE1Q14687 1217 aa15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 AADACL2Q6P093 401 aa15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 DUS1LQ6P1R4 473 aaKnown RBP15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 C6orf15Q6UXA7 325 aaPredicted RBP15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 ARHGEF18Q6ZSZ5 1173 aa15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 SIDT2Q8NBJ9 832 aaKnown RBP15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 GALNT6Q8NCL4 622 aa15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 ULK4Q96C45 1275 aa15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 C12orf66Q96MD2 445 aa15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 SPRY4Q9C004 299 aa15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 WWP1Q9H0M0 922 aa15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 PDE7BQ9NP56 450 aa15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 AMFRQ9UKV5 643 aa15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 KCTD3Q9Y597 815 aa15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 MRPS18BQ9Y676 258 aaKnown RBP15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 TEP1Q99973 2627 aaKnown RBP15.4■□□□□ 0.06
CHCHD3-204ENST00000457942 MGAT4DA6NG13 374 aa15.39■□□□□ 0.05
CHCHD3-204ENST00000457942 CFAP99D6REC4 459 aa15.39■□□□□ 0.05
CHCHD3-204ENST00000457942 ZNF189O75820 626 aaPredicted RBP15.39■□□□□ 0.05
CHCHD3-204ENST00000457942 ZNF28P17035 718 aa15.39■□□□□ 0.05
CHCHD3-204ENST00000457942 VAV2P52735 878 aa15.39■□□□□ 0.05
CHCHD3-204ENST00000457942 TUBB3Q13509 450 aa15.39■□□□□ 0.05
CHCHD3-204ENST00000457942 MAP7Q14244 749 aa15.39■□□□□ 0.05
CHCHD3-204ENST00000457942 SPARCL1Q14515 664 aa15.39■□□□□ 0.05
CHCHD3-204ENST00000457942 DNTTIP2Q5QJE6 756 aaKnown RBP15.39■□□□□ 0.05
CHCHD3-204ENST00000457942 ARMC6Q6NXE6 501 aa15.39■□□□□ 0.05
CHCHD3-204ENST00000457942 RAD9BQ6WBX8 426 aa15.39■□□□□ 0.05
CHCHD3-204ENST00000457942 PEX26Q7Z412 305 aa15.39■□□□□ 0.05
CHCHD3-204ENST00000457942 OOSP2Q86WS3 158 aa15.39■□□□□ 0.05
CHCHD3-204ENST00000457942 PPP1R3BQ86XI6 285 aa15.39■□□□□ 0.05
CHCHD3-204ENST00000457942 UBL4BQ8N7F7 174 aa15.39■□□□□ 0.05
CHCHD3-204ENST00000457942 OR13C4Q8NGS5 318 aa15.39■□□□□ 0.05
CHCHD3-204ENST00000457942 FAM96AQ9H5X1 160 aa15.39■□□□□ 0.05
CHCHD3-204ENST00000457942 EPHA6Q9UF33 1036 aa15.39■□□□□ 0.05
CHCHD3-204ENST00000457942 CROTQ9UKG9 612 aa15.39■□□□□ 0.05
CHCHD3-204ENST00000457942 PCDHB3Q9Y5E6 796 aa15.39■□□□□ 0.05
CHCHD3-204ENST00000457942 SPTBN1Q01082 2364 aaKnown RBP15.39■□□□□ 0.05
CHCHD3-204ENST00000457942 UBA6A0AVT1 1052 aaPredicted RBP15.38■□□□□ 0.05
CHCHD3-204ENST00000457942 GRID2IPA4D2P6 1211 aa15.38■□□□□ 0.05
CHCHD3-204ENST00000457942 BTNL10A8MVZ5 291 aa15.38■□□□□ 0.05
CHCHD3-204ENST00000457942 KATNA1O75449 491 aa15.38■□□□□ 0.05
CHCHD3-204ENST00000457942 POLBP06746 335 aa15.38■□□□□ 0.05
CHCHD3-204ENST00000457942 CCNYL3P0C7X3 344 aa15.38■□□□□ 0.05
CHCHD3-204ENST00000457942 PYGMP11217 842 aa15.38■□□□□ 0.05
CHCHD3-204ENST00000457942 NELFEP18615 380 aaKnown RBP15.38■□□□□ 0.05
CHCHD3-204ENST00000457942 ADRA1AP35348 466 aa15.38■□□□□ 0.05
CHCHD3-204ENST00000457942 HADHAP40939 763 aa15.38■□□□□ 0.05
CHCHD3-204ENST00000457942 KLRB1Q12918 225 aa15.38■□□□□ 0.05
CHCHD3-204ENST00000457942 SEPT6Q14141 434 aa15.38■□□□□ 0.05
CHCHD3-204ENST00000457942 METRNLQ641Q3 311 aa15.38■□□□□ 0.05
CHCHD3-204ENST00000457942 RANBP10Q6VN20 620 aa15.38■□□□□ 0.05
CHCHD3-204ENST00000457942 TXLNBQ8N3L3 684 aa15.38■□□□□ 0.05
CHCHD3-204ENST00000457942 OR2L2Q8NH16 312 aa15.38■□□□□ 0.05
CHCHD3-204ENST00000457942 APOBEC4Q8WW27 367 aaKnown RBP15.38■□□□□ 0.05
CHCHD3-204ENST00000457942 KLHL6Q8WZ60 621 aa15.38■□□□□ 0.05
CHCHD3-204ENST00000457942 UBXN4Q92575 508 aa15.38■□□□□ 0.05
CHCHD3-204ENST00000457942 ALG3Q92685 438 aa15.38■□□□□ 0.05
CHCHD3-204ENST00000457942 LACRTQ9GZZ8 138 aa15.38■□□□□ 0.05
CHCHD3-204ENST00000457942 RAB33BQ9H082 229 aa15.38■□□□□ 0.05
CHCHD3-204ENST00000457942 RARRES3Q9UL19 164 aa15.38■□□□□ 0.05
CHCHD3-204ENST00000457942 ACSL5Q9ULC5 683 aa15.38■□□□□ 0.05
CHCHD3-204ENST00000457942 REXO2Q9Y3B8 237 aaKnown RBP15.38■□□□□ 0.05
CHCHD3-204ENST00000457942 IGHV5-51A0A0C4DH38 117 aa15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 KLHL33A6NCF5 533 aa15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 OR5K3A6NET4 321 aa15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 TLCD2A6NGC4 264 aa15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 CCL22O00626 93 aa15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 SPAG6O75602 509 aa15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 RNF224P0DH78 156 aa15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 FGF5P12034 268 aa15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 GNLYP22749 145 aa15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 MC4RP32245 332 aa15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 KCNAB1Q14722 419 aa15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 BCL7AQ4VC05 210 aa15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 ZRANB3Q5FWF4 1079 aa15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 SNX20Q7Z614 316 aa15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 CFAP206Q8IYR0 622 aa15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 SYCE1Q8N0S2 351 aa15.37■□□□□ 0.05
CHCHD3-204ENST00000457942 TTC13Q8NBP0 860 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms