RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 NFE2L1Q14494 772 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 ACAP2Q15057 778 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 TCEA2Q15560 299 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 TSNAXIP1Q2TAA8 658 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 MAP7D1Q3KQU3 841 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 BCL7AQ4VC05 210 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 VWA5B1Q5TIE3 1220 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 PRAMEF9Q5VWM5 478 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 ZDHHC20Q5W0Z9 365 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 TBC1D3GQ6DHY5 549 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 TBC1D3CQ6IPX1 549 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 TSSK4Q6SA08 328 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 USP30Q70CQ3 517 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 TRMT11Q7Z4G4 463 aaKnown RBP8.57□□□□□ -1.04
RIF1-208ENST00000457745 SFTPA2Q8IWL1 248 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 RAVER1Q8IY67 606 aaKnown RBP8.57□□□□□ -1.04
RIF1-208ENST00000457745 TBC1D3Q8IZP1 549 aaPredicted RBP8.57□□□□□ -1.04
RIF1-208ENST00000457745 ZNF781Q8N8C0 355 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 PJA1Q8NG27 643 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 AGR3Q8TD06 166 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 ELMO1Q92556 727 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 CLDN23Q96B33 292 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 TOE1Q96GM8 510 aaKnown RBP8.57□□□□□ -1.04
RIF1-208ENST00000457745 HIC2Q96JB3 615 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 EBF4Q9BQW3 602 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 TSSK1BQ9BXA7 367 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 CCDC68Q9H2F9 335 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 CHRDQ9H2X0 955 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 TFB2MQ9H5Q4 396 aaKnown RBP8.57□□□□□ -1.04
RIF1-208ENST00000457745 ZBTB26Q9HCK0 441 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 FGF22Q9HCT0 170 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 NPHS2Q9NP85 383 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 ZNF225Q9UK10 706 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 FZD4Q9ULV1 537 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 DNAJC16Q9Y2G8 782 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 PTGDR2Q9Y5Y4 395 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 CACNA1IQ9P0X4 2223 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 TP53BP1Q12888 1972 aaPredicted RBP8.57□□□□□ -1.04
RIF1-208ENST00000457745 TRIOO75962 3097 aa8.57□□□□□ -1.04
RIF1-208ENST00000457745 CEP192Q8TEP8 1941 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 ERICH4A6NGS2 130 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 PRR19A6NJB7 356 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 ARHGEF33A8MVX0 844 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 CHUKO15111 745 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 GRID2O43424 1007 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 NUAK1O60285 661 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 TRIM13O60858 407 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 POP7O75817 140 aaKnown RBP8.56□□□□□ -1.04
RIF1-208ENST00000457745 CDK14O94921 469 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 SEMA4FO95754 770 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 EML2O95834 649 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 PYGLP06737 847 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 RPS17P08708 135 aaKnown RBP8.56□□□□□ -1.04
RIF1-208ENST00000457745 TPBGLP0DKB5 382 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 KITP10721 976 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 EPORP19235 508 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 ATP5F1P24539 256 aaPredicted RBP8.56□□□□□ -1.04
RIF1-208ENST00000457745 SLC26A3P40879 764 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 GDF5P43026 501 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 GCGRP47871 477 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 SLC1A6P48664 564 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 FOXA1P55317 472 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 IL2P60568 153 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 ABCE1P61221 599 aaKnown RBP8.56□□□□□ -1.04
RIF1-208ENST00000457745 RPS21P63220 83 aaKnown RBP8.56□□□□□ -1.04
RIF1-208ENST00000457745 ZXDAP98168 799 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 STX3Q13277 289 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 TUBB3Q13509 450 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 SEPT7Q16181 437 aaKnown RBP8.56□□□□□ -1.04
RIF1-208ENST00000457745 PFKFB4Q16877 469 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 FAM83EQ2M2I3 478 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 TTC31Q49AM3 519 aaPredicted RBP8.56□□□□□ -1.04
RIF1-208ENST00000457745 ARL13AQ5H913 290 aaPredicted RBP8.56□□□□□ -1.04
RIF1-208ENST00000457745 LDLRAP1Q5SW96 308 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 ZNF678Q5SXM1 525 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 AGAP9Q5VTM2 703 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 LIPMQ5VYY2 423 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 KIAA1161Q6NSJ0 714 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 DUS1LQ6P1R4 473 aaKnown RBP8.56□□□□□ -1.04
RIF1-208ENST00000457745 BLOC1S3Q6QNY0 202 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 TRIM69Q86WT6 500 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 PHYKPLQ8IUZ5 450 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 SLC22A18ASQ8N1D0 253 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 PGBD3Q8N328 593 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 CCNYL1Q8N7R7 359 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 TSTD1Q8NFU3 115 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 RDH11Q8TC12 318 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 OR1E3Q8WZA6 343 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 PDXPQ96GD0 296 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 PDLIM5Q96HC4 596 aaKnown RBP8.56□□□□□ -1.04
RIF1-208ENST00000457745 SEC16BQ96JE7 1060 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 ASB2Q96Q27 587 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 CDH19Q9H159 772 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 TCEAL2Q9H3H9 227 aaPredicted RBP8.56□□□□□ -1.04
RIF1-208ENST00000457745 COG4Q9H9E3 785 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 FBRSQ9HAH7 460 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 TRIM39Q9HCM9 518 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 PREBQ9HCU5 417 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 RAD18Q9NS91 495 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 SPATS2LQ9NUQ6 558 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms