RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 F3P13726 295 aa13.77□□□□□ -0.21
TIMP1-205ENST00000456754 IDSP22304 550 aa13.77□□□□□ -0.21
TIMP1-205ENST00000456754 GMPRP36959 345 aa13.77□□□□□ -0.21
TIMP1-205ENST00000456754 PPARGP37231 505 aaPredicted RBP13.77□□□□□ -0.21
TIMP1-205ENST00000456754 NOVA1P51513 510 aaKnown RBP13.77□□□□□ -0.21
TIMP1-205ENST00000456754 PMS2P54278 862 aa13.77□□□□□ -0.21
TIMP1-205ENST00000456754 TRIP6Q15654 476 aaKnown RBP13.77□□□□□ -0.21
TIMP1-205ENST00000456754 C14orf28Q4W4Y0 310 aa13.77□□□□□ -0.21
TIMP1-205ENST00000456754 RNF187Q5TA31 235 aaPredicted RBP13.77□□□□□ -0.21
TIMP1-205ENST00000456754 IYDQ6PHW0 289 aa13.77□□□□□ -0.21
TIMP1-205ENST00000456754 LVRNQ6Q4G3 990 aa13.77□□□□□ -0.21
TIMP1-205ENST00000456754 EFL1Q7Z2Z2 1120 aaKnown RBP13.77□□□□□ -0.21
TIMP1-205ENST00000456754 SLCO6A1Q86UG4 719 aa13.77□□□□□ -0.21
TIMP1-205ENST00000456754 ZC3HC1Q86WB0 502 aaKnown RBP13.77□□□□□ -0.21
TIMP1-205ENST00000456754 C17orf82Q86X59 251 aaPredicted RBP13.77□□□□□ -0.21
TIMP1-205ENST00000456754 CTAGE3PQ8IX95 158 aa13.77□□□□□ -0.21
TIMP1-205ENST00000456754 ARL10Q8N8L6 244 aa13.77□□□□□ -0.21
TIMP1-205ENST00000456754 GPATCH11Q8N954 259 aa13.77□□□□□ -0.21
TIMP1-205ENST00000456754 FAM181AQ8N9Y4 354 aa13.77□□□□□ -0.21
TIMP1-205ENST00000456754 AARSD1Q9BTE6 412 aaKnown RBP13.77□□□□□ -0.21
TIMP1-205ENST00000456754 DUSP23Q9BVJ7 150 aa13.77□□□□□ -0.21
TIMP1-205ENST00000456754 OR52A5Q9H2C5 316 aa13.77□□□□□ -0.21
TIMP1-205ENST00000456754 PADI4Q9UM07 663 aa13.77□□□□□ -0.21
TIMP1-205ENST00000456754 DCHS1Q96JQ0 3298 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 KRT87PA6NCN2 255 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 KCNK5O95279 499 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 ESR1P03372 595 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 GSTA2P09210 222 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 CKMT1AP12532 417 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 CHRM3P20309 590 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 SAT1P21673 171 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 AOAHP28039 575 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 SLC19A1P41440 591 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 CD151P48509 253 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 ACADVLP49748 655 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 CLCN7P51798 805 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 ADARP55265 1226 aaKnown RBP13.76□□□□□ -0.21
TIMP1-205ENST00000456754 DAB2P98082 770 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 HSPA14Q0VDF9 509 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 ZNF460Q14592 562 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 NR0B2Q15466 257 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 UAP1Q16222 522 aaPredicted RBP13.76□□□□□ -0.21
TIMP1-205ENST00000456754 RPE65Q16518 533 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 ACSBG2Q5FVE4 666 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 ABRAXAS1Q6UWZ7 409 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 LRRC6Q86X45 466 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 LMNTD2Q8IXW0 634 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 SFRP1Q8N474 314 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 Q8N9G6 341 aaPredicted RBP13.76□□□□□ -0.21
TIMP1-205ENST00000456754 PHC3Q8NDX5 983 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 SCG3Q8WXD2 468 aaKnown RBP13.76□□□□□ -0.21
TIMP1-205ENST00000456754 CCDC74AQ96AQ1 378 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 GPR21Q99679 349 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 CAB39LQ9H9S4 337 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 IMP3Q9NV31 184 aaKnown RBP13.76□□□□□ -0.21
TIMP1-205ENST00000456754 DLL3Q9NYJ7 618 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 CIDEBQ9UHD4 219 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 MTO1Q9Y2Z2 717 aaKnown RBP13.76□□□□□ -0.21
TIMP1-205ENST00000456754 PCDHB1Q9Y5F3 818 aa13.76□□□□□ -0.21
TIMP1-205ENST00000456754 COL27A1Q8IZC6 1860 aaPredicted RBP13.76□□□□□ -0.21
TIMP1-205ENST00000456754 C17orf113A0A1B0GUU1 675 aa13.75□□□□□ -0.21
TIMP1-205ENST00000456754 RIPK2O43353 540 aa13.75□□□□□ -0.21
TIMP1-205ENST00000456754 GPC4O75487 556 aa13.75□□□□□ -0.21
TIMP1-205ENST00000456754 CKMT2P17540 419 aa13.75□□□□□ -0.21
TIMP1-205ENST00000456754 VCLP18206 1134 aa13.75□□□□□ -0.21
TIMP1-205ENST00000456754 CSRP1P21291 193 aaKnown RBP13.75□□□□□ -0.21
TIMP1-205ENST00000456754 STX2P32856 288 aa13.75□□□□□ -0.21
TIMP1-205ENST00000456754 UBE2IP63279 158 aaKnown RBP13.75□□□□□ -0.21
TIMP1-205ENST00000456754 SIM1P81133 766 aaPredicted RBP13.75□□□□□ -0.21
TIMP1-205ENST00000456754 INAVAQ3KP66 663 aa13.75□□□□□ -0.21
TIMP1-205ENST00000456754 SYTL3Q4VX76 610 aa13.75□□□□□ -0.21
TIMP1-205ENST00000456754 HECTD2Q5U5R9 776 aa13.75□□□□□ -0.21
TIMP1-205ENST00000456754 AGAP9Q5VTM2 703 aa13.75□□□□□ -0.21
TIMP1-205ENST00000456754 CAPRIN2Q6IMN6 1127 aaKnown RBP13.75□□□□□ -0.21
TIMP1-205ENST00000456754 KIAA0408Q6ZU52 694 aa13.75□□□□□ -0.21
TIMP1-205ENST00000456754 MARCH9Q86YJ5 346 aa13.75□□□□□ -0.21
TIMP1-205ENST00000456754 SDR16C5Q8N3Y7 309 aa13.75□□□□□ -0.21
TIMP1-205ENST00000456754 LMNTD1Q8N9Z9 388 aa13.75□□□□□ -0.21
TIMP1-205ENST00000456754 IFI44Q8TCB0 444 aa13.75□□□□□ -0.21
TIMP1-205ENST00000456754 MAPK15Q8TD08 544 aa13.75□□□□□ -0.21
TIMP1-205ENST00000456754 CD200R1Q8TD46 325 aa13.75□□□□□ -0.21
TIMP1-205ENST00000456754 AENQ8WTP8 325 aaKnown RBP13.75□□□□□ -0.21
TIMP1-205ENST00000456754 VPS39Q96JC1 886 aa13.75□□□□□ -0.21
TIMP1-205ENST00000456754 ELMO2Q96JJ3 720 aa13.75□□□□□ -0.21
TIMP1-205ENST00000456754 C12orf66Q96MD2 445 aa13.75□□□□□ -0.21
TIMP1-205ENST00000456754 ACSS3Q9H6R3 686 aa13.75□□□□□ -0.21
TIMP1-205ENST00000456754 CPNE7Q9UBL6 633 aa13.75□□□□□ -0.21
TIMP1-205ENST00000456754 NFS1Q9Y697 457 aa13.75□□□□□ -0.21
TIMP1-205ENST00000456754 UNC13CQ8NB66 2214 aa13.74□□□□□ -0.21
TIMP1-205ENST00000456754 FAM95CA0A1B0GW59 222 aa13.74□□□□□ -0.21
TIMP1-205ENST00000456754 HMX2A2RU54 273 aa13.74□□□□□ -0.21
TIMP1-205ENST00000456754 E5RI56 91 aa13.74□□□□□ -0.21
TIMP1-205ENST00000456754 TNFSF14O43557 240 aa13.74□□□□□ -0.21
TIMP1-205ENST00000456754 SHBGP04278 402 aa13.74□□□□□ -0.21
TIMP1-205ENST00000456754 SLC35G4P0C7Q5 338 aa13.74□□□□□ -0.21
TIMP1-205ENST00000456754 MTHFD1P11586 935 aaKnown RBP13.74□□□□□ -0.21
TIMP1-205ENST00000456754 MCM3P25205 808 aa13.74□□□□□ -0.21
TIMP1-205ENST00000456754 ACADLP28330 430 aa13.74□□□□□ -0.21
TIMP1-205ENST00000456754 GCAP28676 217 aa13.74□□□□□ -0.21
TIMP1-205ENST00000456754 OR1D5P58170 312 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms