RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 ETV5P41161 510 aa16.97■□□□□ 0.31
USP39-208ENST00000455732 CRADDP78560 199 aa16.97■□□□□ 0.31
USP39-208ENST00000455732 RPE65Q16518 533 aa16.97■□□□□ 0.31
USP39-208ENST00000455732 AARS2Q5JTZ9 985 aaKnown RBP16.97■□□□□ 0.31
USP39-208ENST00000455732 CAND1Q86VP6 1230 aaKnown RBP16.97■□□□□ 0.31
USP39-208ENST00000455732 CLDN19Q8N6F1 224 aa16.97■□□□□ 0.31
USP39-208ENST00000455732 RCBTB1Q8NDN9 531 aa16.97■□□□□ 0.31
USP39-208ENST00000455732 CCDC74BQ96LY2 380 aa16.97■□□□□ 0.31
USP39-208ENST00000455732 TTC1Q99614 292 aa16.97■□□□□ 0.31
USP39-208ENST00000455732 CCM2Q9BSQ5 444 aa16.97■□□□□ 0.31
USP39-208ENST00000455732 TBC1D10AQ9BXI6 508 aa16.97■□□□□ 0.31
USP39-208ENST00000455732 DDX47Q9H0S4 455 aaKnown RBP16.97■□□□□ 0.31
USP39-208ENST00000455732 XAB2Q9HCS7 855 aaKnown RBP16.97■□□□□ 0.31
USP39-208ENST00000455732 SYBUQ9NX95 663 aa16.97■□□□□ 0.31
USP39-208ENST00000455732 RNF14Q9UBS8 474 aa16.97■□□□□ 0.31
USP39-208ENST00000455732 PISDQ9UG56 409 aa16.97■□□□□ 0.31
USP39-208ENST00000455732 SOX13Q9UN79 622 aa16.97■□□□□ 0.31
USP39-208ENST00000455732 MN1Q10571 1320 aaPredicted RBP16.96■□□□□ 0.31
USP39-208ENST00000455732 NVLO15381 856 aaKnown RBP16.96■□□□□ 0.31
USP39-208ENST00000455732 SLC35G4P0C7Q5 338 aa16.96■□□□□ 0.31
USP39-208ENST00000455732 MTHFD1P11586 935 aaKnown RBP16.96■□□□□ 0.31
USP39-208ENST00000455732 PPARGP37231 505 aaPredicted RBP16.96■□□□□ 0.31
USP39-208ENST00000455732 MAGEA3P43357 314 aa16.96■□□□□ 0.31
USP39-208ENST00000455732 RPA4Q13156 261 aa16.96■□□□□ 0.31
USP39-208ENST00000455732 GPR18Q14330 331 aa16.96■□□□□ 0.31
USP39-208ENST00000455732 FASTKD1Q53R41 847 aaKnown RBP16.96■□□□□ 0.31
USP39-208ENST00000455732 NAT8LQ8N9F0 302 aa16.96■□□□□ 0.31
USP39-208ENST00000455732 OR6P1Q8NGX9 317 aa16.96■□□□□ 0.31
USP39-208ENST00000455732 RUNDC3BQ96NL0 473 aa16.96■□□□□ 0.31
USP39-208ENST00000455732 COG4Q9H9E3 785 aa16.96■□□□□ 0.31
USP39-208ENST00000455732 AKAP7Q9P0M2 348 aaPredicted RBP16.96■□□□□ 0.31
USP39-208ENST00000455732 TMEM9Q9P0T7 183 aa16.96■□□□□ 0.31
USP39-208ENST00000455732 PSMD13Q9UNM6 376 aa16.96■□□□□ 0.31
USP39-208ENST00000455732 ATMQ13315 3056 aa16.96■□□□□ 0.31
USP39-208ENST00000455732 AGRPO00253 132 aa16.95■□□□□ 0.3
USP39-208ENST00000455732 KLK10O43240 276 aa16.95■□□□□ 0.3
USP39-208ENST00000455732 UBXN7O94888 489 aa16.95■□□□□ 0.3
USP39-208ENST00000455732 NMBRP28336 390 aa16.95■□□□□ 0.3
USP39-208ENST00000455732 CAPZBP47756 277 aa16.95■□□□□ 0.3
USP39-208ENST00000455732 PTK6Q13882 451 aa16.95■□□□□ 0.3
USP39-208ENST00000455732 PPP1R7Q15435 360 aa16.95■□□□□ 0.3
USP39-208ENST00000455732 CAPRIN2Q6IMN6 1127 aaKnown RBP16.95■□□□□ 0.3
USP39-208ENST00000455732 CFAP206Q8IYR0 622 aa16.95■□□□□ 0.3
USP39-208ENST00000455732 MPP5Q8N3R9 675 aa16.95■□□□□ 0.3
USP39-208ENST00000455732 LILRA3Q8N6C8 439 aaPredicted RBP16.95■□□□□ 0.3
USP39-208ENST00000455732 GPR150Q8NGU9 434 aa16.95■□□□□ 0.3
USP39-208ENST00000455732 ZFPM2Q8WW38 1151 aa16.95■□□□□ 0.3
USP39-208ENST00000455732 CAPZA3Q96KX2 299 aa16.95■□□□□ 0.3
USP39-208ENST00000455732 RMDN2Q96LZ7 410 aa16.95■□□□□ 0.3
USP39-208ENST00000455732 SERPINB12Q96P63 405 aa16.95■□□□□ 0.3
USP39-208ENST00000455732 INSM2Q96T92 566 aaPredicted RBP16.95■□□□□ 0.3
USP39-208ENST00000455732 ZMYND15Q9H091 742 aa16.95■□□□□ 0.3
USP39-208ENST00000455732 WWP1Q9H0M0 922 aa16.95■□□□□ 0.3
USP39-208ENST00000455732 OR52A5Q9H2C5 316 aa16.95■□□□□ 0.3
USP39-208ENST00000455732 CATSPERZQ9NTU4 200 aa16.95■□□□□ 0.3
USP39-208ENST00000455732 OGFRQ9NZT2 677 aa16.95■□□□□ 0.3
USP39-208ENST00000455732 PRSS21Q9Y6M0 314 aa16.95■□□□□ 0.3
USP39-208ENST00000455732 PRAMEF33A0A0G2JMD5 474 aa16.94■□□□□ 0.3
USP39-208ENST00000455732 F8W8V4 182 aa16.94■□□□□ 0.3
USP39-208ENST00000455732 AVILO75366 819 aa16.94■□□□□ 0.3
USP39-208ENST00000455732 C9P02748 559 aa16.94■□□□□ 0.3
USP39-208ENST00000455732 FTH1P02794 183 aa16.94■□□□□ 0.3
USP39-208ENST00000455732 OR56A5P0C7T3 313 aa16.94■□□□□ 0.3
USP39-208ENST00000455732 CCL4P13236 92 aa16.94■□□□□ 0.3
USP39-208ENST00000455732 MPSTP25325 297 aa16.94■□□□□ 0.3
USP39-208ENST00000455732 ARNTP27540 789 aa16.94■□□□□ 0.3
USP39-208ENST00000455732 TTPAP49638 278 aa16.94■□□□□ 0.3
USP39-208ENST00000455732 TERF1P54274 439 aa16.94■□□□□ 0.3
USP39-208ENST00000455732 CLN3Q13286 438 aa16.94■□□□□ 0.3
USP39-208ENST00000455732 SEMA3AQ14563 771 aa16.94■□□□□ 0.3
USP39-208ENST00000455732 RNASEH2BQ5TBB1 312 aaKnown RBP16.94■□□□□ 0.3
USP39-208ENST00000455732 KIAA0930Q6ICG6 404 aaPredicted RBP16.94■□□□□ 0.3
USP39-208ENST00000455732 SYDE1Q6ZW31 735 aaPredicted RBP16.94■□□□□ 0.3
USP39-208ENST00000455732 ARHGAP22Q7Z5H3 698 aa16.94■□□□□ 0.3
USP39-208ENST00000455732 JAMLQ86YT9 394 aa16.94■□□□□ 0.3
USP39-208ENST00000455732 PLXDC1Q8IUK5 500 aa16.94■□□□□ 0.3
USP39-208ENST00000455732 PPIL6Q8IXY8 311 aa16.94■□□□□ 0.3
USP39-208ENST00000455732 AGBL5Q8NDL9 886 aa16.94■□□□□ 0.3
USP39-208ENST00000455732 NCSTNQ92542 709 aa16.94■□□□□ 0.3
USP39-208ENST00000455732 MFSD3Q96ES6 412 aa16.94■□□□□ 0.3
USP39-208ENST00000455732 C12orf66Q96MD2 445 aa16.94■□□□□ 0.3
USP39-208ENST00000455732 FCRL3Q96P31 734 aaPredicted RBP16.94■□□□□ 0.3
USP39-208ENST00000455732 B3GNT4Q9C0J1 378 aa16.94■□□□□ 0.3
USP39-208ENST00000455732 IMP3Q9NV31 184 aaKnown RBP16.94■□□□□ 0.3
USP39-208ENST00000455732 MARCH4Q9P2E8 410 aaPredicted RBP16.94■□□□□ 0.3
USP39-208ENST00000455732 FAM8A1Q9UBU6 413 aa16.94■□□□□ 0.3
USP39-208ENST00000455732 ANAPC5Q9UJX4 755 aa16.94■□□□□ 0.3
USP39-208ENST00000455732 HEBP2Q9Y5Z4 205 aa16.94■□□□□ 0.3
USP39-208ENST00000455732 MAGEB16A2A368 324 aa16.93■□□□□ 0.3
USP39-208ENST00000455732 SDR42E2A6NKP2 422 aa16.93■□□□□ 0.3
USP39-208ENST00000455732 C9orf172C9J069 976 aa16.93■□□□□ 0.3
USP39-208ENST00000455732 CCDC188H7C350 402 aa16.93■□□□□ 0.3
USP39-208ENST00000455732 LIN7AO14910 233 aaPredicted RBP16.93■□□□□ 0.3
USP39-208ENST00000455732 CD3EAPO15446 510 aaKnown RBP16.93■□□□□ 0.3
USP39-208ENST00000455732 OR1I1O60431 355 aa16.93■□□□□ 0.3
USP39-208ENST00000455732 PRAMEF10O60809 474 aa16.93■□□□□ 0.3
USP39-208ENST00000455732 ANKRD34CP0C6C1 535 aa16.93■□□□□ 0.3
USP39-208ENST00000455732 FGF3P11487 239 aaPredicted RBP16.93■□□□□ 0.3
USP39-208ENST00000455732 NDUFS1P28331 727 aa16.93■□□□□ 0.3
USP39-208ENST00000455732 PAFAH1B1P43034 410 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms