RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 RPL5P46777 297 aaKnown RBP14.82□□□□□ -0.04
LDLR-202ENST00000455727 GSK3BP49841 420 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 NRF1Q16656 503 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 MYLK3Q32MK0 819 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 TTLL9Q3SXZ7 439 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 AASDHQ4L235 1098 aaPredicted RBP14.82□□□□□ -0.04
LDLR-202ENST00000455727 TBCELQ5QJ74 424 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 INTS11Q5TA45 600 aaKnown RBP14.82□□□□□ -0.04
LDLR-202ENST00000455727 LILRA6Q6PI73 481 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 AMIGO2Q86SJ2 522 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 GALNT13Q8IUC8 556 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 KIAA2013Q8IYS2 634 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 HS6ST3Q8IZP7 471 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 DCBLD1Q8N8Z6 715 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 DNAJB14Q8TBM8 379 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 NCSTNQ92542 709 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 PPP3R2Q96LZ3 170 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 MRPS26Q9BYN8 205 aaKnown RBP14.82□□□□□ -0.04
LDLR-202ENST00000455727 CPEB1Q9BZB8 566 aaKnown RBP14.82□□□□□ -0.04
LDLR-202ENST00000455727 PAPOLBQ9NRJ5 636 aaKnown RBP14.82□□□□□ -0.04
LDLR-202ENST00000455727 ELOVL2Q9NXB9 296 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 EGFL7Q9UHF1 273 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 PLXNB3Q9ULL4 1909 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 CCL27Q9Y4X3 112 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 ZFC3H1O60293 1989 aaKnown RBP14.82□□□□□ -0.04
LDLR-202ENST00000455727 LEFTY2O00292 366 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 AKAP10O43572 662 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 UMPSP11172 480 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 ITGB6P18564 788 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 HTR1EP28566 365 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 HMOX2P30519 316 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 HSPA7P48741 367 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 HTR6P50406 440 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 PRKCQQ04759 706 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 LIPEQ05469 1076 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 CDKL4Q5MAI5 379 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 NANOGP8Q6NSW7 305 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 CRTC1Q6UUV9 634 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 ZBTB49Q6ZSB9 765 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 CCDC149Q6ZUS6 474 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 HID1Q8IV36 788 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 ADGRG5Q8IZF4 528 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 GALNT15Q8N3T1 639 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 RHBDF1Q96CC6 855 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 SLC29A1Q99808 456 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 CIB1Q99828 191 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 NTMT1Q9BV86 223 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 CRISPLD2Q9H0B8 497 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 NANOGQ9H9S0 305 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 C8orf4Q9NR00 106 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 AGPAT4Q9NRZ5 378 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 PCDHGB4Q9UN71 923 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 PCDHGB5Q9Y5G0 923 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 NPIPB15A6NHN6 443 aaPredicted RBP14.81□□□□□ -0.04
LDLR-202ENST00000455727 EIF3FO00303 357 aaPredicted RBP14.81□□□□□ -0.04
LDLR-202ENST00000455727 ANKRD28O15084 1053 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 WDR47O94967 919 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 CLPTM1O96005 669 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 JAK1P23458 1154 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 ARL1P40616 181 aaPredicted RBP14.81□□□□□ -0.04
LDLR-202ENST00000455727 WDR5P61964 334 aaKnown RBP14.81□□□□□ -0.04
LDLR-202ENST00000455727 ABRAXAS2Q15018 415 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 AP5B1Q2VPB7 878 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 CNPY1Q3B7I2 92 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 TIGD2Q4W5G0 525 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 RABL3Q5HYI8 236 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 TTC23LQ6PF05 361 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 SLC30A9Q6PML9 568 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 CYP20A1Q6UW02 462 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 PAPD5Q8NDF8 572 aaKnown RBP14.81□□□□□ -0.04
LDLR-202ENST00000455727 GPR26Q8NDV2 337 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 TTC16Q8NEE8 873 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 TRPV3Q8NET8 790 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 ZFAND2BQ8WV99 257 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 MCCC1Q96RQ3 725 aaPredicted RBP14.81□□□□□ -0.04
LDLR-202ENST00000455727 KCTD14Q9BQ13 255 aaPredicted RBP14.81□□□□□ -0.04
LDLR-202ENST00000455727 ZDHHC3Q9NYG2 299 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 OPTCQ9UBM4 332 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 TFAP2AP05549 437 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 FCGR1AP12314 374 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 FASP25445 335 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 GK3PQ14409 553 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 NR6A1Q15406 480 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 ZDHHC20Q5W0Z9 365 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 USP45Q70EL2 814 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 TSPAN33Q86UF1 283 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 CARM1Q86X55 608 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 PROSER1Q86XN7 944 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 MFSD2AQ8NA29 543 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 TMEM79Q9BSE2 394 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 ACTL8Q9H568 366 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 SUV39H2Q9H5I1 410 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 KCTD5Q9NXV2 234 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 AURKCQ9UQB9 309 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 ATP11BQ9Y2G3 1177 aa14.81□□□□□ -0.04
LDLR-202ENST00000455727 TCRBV5S2A0A599 114 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 ENO4A6NNW6 628 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 K7EPI3 171 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 SLC28A1O00337 649 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 RGS14O43566 566 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms