RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 SLC35G4P0C7Q5 338 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 OR56A5P0C7T3 313 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 PGAM1P18669 254 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 MLLT3P42568 568 aaPredicted RBP13.85□□□□□ -0.19
HDAC4-205ENST00000454542 CAPZBP47756 277 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 CD151P48509 253 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 LIMK2P53671 638 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 GABREP78334 506 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 DHX9Q08211 1270 aaKnown RBP13.85□□□□□ -0.19
HDAC4-205ENST00000454542 TRA2AQ13595 282 aaKnown RBP eCLIP13.85□□□□□ -0.19
HDAC4-205ENST00000454542 GPR18Q14330 331 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 AMZ1Q400G9 498 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 MSS51Q4VC12 460 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 RNF187Q5TA31 235 aaPredicted RBP13.85□□□□□ -0.19
HDAC4-205ENST00000454542 NKAIN2Q5VXU1 208 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 DUS1LQ6P1R4 473 aaKnown RBP13.85□□□□□ -0.19
HDAC4-205ENST00000454542 CASC4Q6P4E1 433 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 TMEM71Q6P5X7 295 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 WDR74Q6RFH5 385 aaPredicted RBP13.85□□□□□ -0.19
HDAC4-205ENST00000454542 PDZD3Q86UT5 571 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 PIM3Q86V86 326 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 LRRC6Q86X45 466 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 PROSER1Q86XN7 944 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 CILP2Q8IUL8 1156 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 TRIM48Q8IWZ4 208 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 CFAP206Q8IYR0 622 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 SPDYE1Q8NFV5 336 aaPredicted RBP13.85□□□□□ -0.19
HDAC4-205ENST00000454542 WDR36Q8NI36 951 aaKnown RBP13.85□□□□□ -0.19
HDAC4-205ENST00000454542 CXorf40BQ96DE9 158 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 STAMBPL1Q96FJ0 436 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 CARD6Q9BX69 1037 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 SEMA6CQ9H3T2 930 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 CCDC86Q9H6F5 360 aaKnown RBP13.85□□□□□ -0.19
HDAC4-205ENST00000454542 PLAC1Q9HBJ0 212 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 EPB41L5Q9HCM4 733 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 ASCL3Q9NQ33 180 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 TMEM9Q9P0T7 183 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 ANAPC5Q9UJX4 755 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 PSMD13Q9UNM6 376 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 SATB2Q9UPW6 733 aa13.85□□□□□ -0.19
HDAC4-205ENST00000454542 ZFHX4Q86UP3 3567 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 PMS2P1A4D2B8 440 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 EFCAB8A8MWE9 144 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 E7ESA3 106 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 F8W8V4 182 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 NDC80O14777 642 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 HGSO14964 777 aaPredicted RBP13.84□□□□□ -0.19
HDAC4-205ENST00000454542 BRINP1O60477 761 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 TUBB4AP04350 444 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 HOXB3P14651 431 aaPredicted RBP13.84□□□□□ -0.19
HDAC4-205ENST00000454542 RPL21P46778 160 aaKnown RBP13.84□□□□□ -0.19
HDAC4-205ENST00000454542 PREPP48147 710 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 ITGA8P53708 1063 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 PLOD1Q02809 727 aaPredicted RBP13.84□□□□□ -0.19
HDAC4-205ENST00000454542 CRYMQ14894 314 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 C16orf72Q14CZ0 275 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 DNAJC21Q5F1R6 531 aaKnown RBP13.84□□□□□ -0.19
HDAC4-205ENST00000454542 C3orf38Q5JPI3 329 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 CTSL3PQ5NE16 218 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 MRNIPQ6NTE8 343 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 CENPUQ71F23 418 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 LMNTD2Q8IXW0 634 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 SNIP1Q8TAD8 396 aaKnown RBP13.84□□□□□ -0.19
HDAC4-205ENST00000454542 ZFPM2Q8WW38 1151 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 RSC1A1Q92681 617 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 TMEM159Q96B96 161 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 CCDC74BQ96LY2 380 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 C12orf66Q96MD2 445 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 BIRC8Q96P09 236 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 TCF12Q99081 682 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 EBNA1BP2Q99848 306 aaKnown RBP13.84□□□□□ -0.19
HDAC4-205ENST00000454542 NAT9Q9BTE0 207 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 STRADBQ9C0K7 418 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 RAB33BQ9H082 229 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 KIR3DX1Q9H7L2 352 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 IMP3Q9NV31 184 aaKnown RBP13.84□□□□□ -0.19
HDAC4-205ENST00000454542 FAM8A1Q9UBU6 413 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 GNPTGQ9UJJ9 305 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 CDYLQ9Y232 598 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 FAM169AQ9Y6X4 670 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 APC2O95996 2303 aa13.84□□□□□ -0.19
HDAC4-205ENST00000454542 CDRT15L2A8MXV6 281 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 GOLGA8KD6RF30 607 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 GOLGA8TH3BQL2 631 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 KIF2AO00139 706 aaPredicted RBP13.83□□□□□ -0.2
HDAC4-205ENST00000454542 TAF4O00268 1085 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 PLD2O14939 933 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 GPC4O75487 556 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 BANF1O75531 89 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 UBXN7O94888 489 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 TTC4O95801 387 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 MPOP05164 745 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 ANKRD34CP0C6C1 535 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 ACADLP28330 430 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 NDUFS1P28331 727 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 PDHA2P29803 388 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 CCR7P32248 378 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 CKAP4Q07065 602 aaKnown RBP13.83□□□□□ -0.2
HDAC4-205ENST00000454542 CYP4F3Q08477 520 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 GBX1Q14549 363 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms