RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 TSEN34Q9BSV6 310 aaKnown RBP11.79□□□□□ -0.52
SMPD4-213ENST00000454468 ACAT2Q9BWD1 397 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 ANAPC2Q9UJX6 822 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 PCTPQ9UKL6 214 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 OTCP00480 354 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 CHRNB3Q05901 458 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 GPNMBQ14956 572 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 HERC3Q15034 1050 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 NCEH1Q6PIU2 408 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 CYP20A1Q6UW02 462 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 DPY19L3Q6ZPD9 716 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 LIX1Q8N485 282 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 KREMEN2Q8NCW0 462 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 MTERF1Q99551 399 aaKnown RBP11.78□□□□□ -0.52
SMPD4-213ENST00000454468 CMTM6Q9NX76 183 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 IL17CQ9P0M4 197 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 PRKAG2Q9UGJ0 569 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 CCL26Q9Y258 94 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 EI24O14681 340 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 SCAMP1O15126 338 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 LDLRP01130 860 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 ANXA5P08758 320 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 BPIP17213 487 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 AQP1P29972 269 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 NFATC2Q13469 925 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 LAPTM4AQ15012 233 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 ACOX1Q15067 660 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 SF1Q15637 639 aaKnown RBP11.78□□□□□ -0.52
SMPD4-213ENST00000454468 NADK2Q4G0N4 442 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 USP45Q70EL2 814 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 CHSY3Q70JA7 882 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 CHST14Q8NCH0 376 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 OR2T11Q8NH01 316 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 MIPOL1Q8TD10 442 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 PLEKHG4BQ96PX9 1271 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 OR52E6Q96RD3 313 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 TCF25Q9BQ70 676 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 VN1R3Q9BXE9 311 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 ELAC1Q9H777 363 aaKnown RBP11.78□□□□□ -0.52
SMPD4-213ENST00000454468 PDFQ9HBH1 243 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 PCDH12Q9NPG4 1184 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 KIAA1522Q9P206 1035 aaPredicted RBP11.78□□□□□ -0.52
SMPD4-213ENST00000454468 MAP10Q9P2G4 905 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 INVSQ9Y283 1065 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 CROCCQ5TZA2 2017 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 NPIPB15A6NHN6 443 aaPredicted RBP11.78□□□□□ -0.52
SMPD4-213ENST00000454468 TGM5O43548 720 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 STK16O75716 305 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 CAPN15O75808 1086 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 PGLSO95336 258 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 SPAM1P38567 509 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 IST1P53990 364 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 VAC14Q08AM6 782 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 MTA1Q13330 715 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 PLEKHG6Q3KR16 790 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 ATP13A5Q4VNC0 1218 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 DOK6Q6PKX4 331 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 ZNF621Q6ZSS3 439 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 Q6ZVL8 140 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 EFL1Q7Z2Z2 1120 aaKnown RBP11.78□□□□□ -0.52
SMPD4-213ENST00000454468 C2orf15Q8WU43 125 aaKnown RBP11.78□□□□□ -0.52
SMPD4-213ENST00000454468 FOXJ1Q92949 421 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 TCEAL4Q96EI5 215 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 L3HYPDHQ96EM0 354 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 MCMBPQ9BTE3 642 aa11.78□□□□□ -0.52
SMPD4-213ENST00000454468 KLF16Q9BXK1 252 aaPredicted RBP11.78□□□□□ -0.52
SMPD4-213ENST00000454468 MYOFQ9NZM1 2061 aa11.77□□□□□ -0.52
SMPD4-213ENST00000454468 SOCS2O14508 198 aa11.77□□□□□ -0.52
SMPD4-213ENST00000454468 GLUD1P00367 558 aa11.77□□□□□ -0.52
SMPD4-213ENST00000454468 ALBP02768 609 aa11.77□□□□□ -0.52
SMPD4-213ENST00000454468 OGFRL1Q5TC84 451 aaPredicted RBP11.77□□□□□ -0.52
SMPD4-213ENST00000454468 TXNDC11Q6PKC3 985 aa11.77□□□□□ -0.52
SMPD4-213ENST00000454468 GAREM2Q75VX8 874 aa11.77□□□□□ -0.52
SMPD4-213ENST00000454468 TTC30BQ8N4P2 665 aa11.77□□□□□ -0.52
SMPD4-213ENST00000454468 FAM120BQ96EK7 910 aaKnown RBP11.77□□□□□ -0.52
SMPD4-213ENST00000454468 FBXL20Q96IG2 436 aa11.77□□□□□ -0.52
SMPD4-213ENST00000454468 HIC2Q96JB3 615 aa11.77□□□□□ -0.52
SMPD4-213ENST00000454468 TMEM175Q9BSA9 504 aa11.77□□□□□ -0.52
SMPD4-213ENST00000454468 SLC8A2Q9UPR5 921 aa11.77□□□□□ -0.52
SMPD4-213ENST00000454468 PDCD11Q14690 1871 aaKnown RBP11.77□□□□□ -0.52
SMPD4-213ENST00000454468 DOCK6Q96HP0 2047 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 PTGES3LE9PB15 166 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 RGS14O43566 566 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 FGF18O76093 207 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 NR4A1P22736 598 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 SLC6A2P23975 617 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 OR4D2P58180 307 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 PRKCQQ04759 706 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 GTDC1Q4AE62 458 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 DGKKQ5KSL6 1271 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 SPANXN4Q5MJ08 99 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 C1QTNF12Q5T7M4 302 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 FOXB2Q5VYV0 432 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 NANOGP8Q6NSW7 305 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 SPESP1Q6UW49 350 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 GALNT10Q86SR1 603 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 CLVS1Q8IUQ0 354 aaPredicted RBP11.77□□□□□ -0.53
SMPD4-213ENST00000454468 OR2AP1Q8NGE2 309 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 KCNJ9Q92806 393 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 HOPXQ9BPY8 73 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms