RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 IQCF5A8MTL0 148 aa27.39■■□□□ 1.98
SMARCC1-203ENST00000454240 LIN7AO14910 233 aaPredicted RBP27.39■■□□□ 1.98
SMARCC1-203ENST00000454240 ERVK-10P10266 1014 aa27.39■■□□□ 1.98
SMARCC1-203ENST00000454240 SLC1A2P43004 574 aa27.39■■□□□ 1.98
SMARCC1-203ENST00000454240 OR1D5P58170 312 aa27.39■■□□□ 1.98
SMARCC1-203ENST00000454240 ZNF789Q5FWF6 425 aa27.39■■□□□ 1.98
SMARCC1-203ENST00000454240 PTRHD1Q6GMV3 140 aaKnown RBP27.39■■□□□ 1.98
SMARCC1-203ENST00000454240 ZBED8Q8IZ13 594 aa27.39■■□□□ 1.98
SMARCC1-203ENST00000454240 ELMO1Q92556 727 aa27.39■■□□□ 1.98
SMARCC1-203ENST00000454240 INSM2Q96T92 566 aaPredicted RBP27.39■■□□□ 1.98
SMARCC1-203ENST00000454240 SCNM1Q9BWG6 230 aa27.39■■□□□ 1.98
SMARCC1-203ENST00000454240 TSSK1BQ9BXA7 367 aa27.39■■□□□ 1.98
SMARCC1-203ENST00000454240 FOXP3Q9BZS1 431 aa27.39■■□□□ 1.98
SMARCC1-203ENST00000454240 OR52A5Q9H2C5 316 aa27.39■■□□□ 1.98
SMARCC1-203ENST00000454240 EPB41L5Q9HCM4 733 aa27.39■■□□□ 1.98
SMARCC1-203ENST00000454240 IARS2Q9NSE4 1012 aaKnown RBP27.39■■□□□ 1.98
SMARCC1-203ENST00000454240 ZDHHC18Q9NUE0 388 aa27.39■■□□□ 1.98
SMARCC1-203ENST00000454240 POT1Q9NUX5 634 aa27.39■■□□□ 1.98
SMARCC1-203ENST00000454240 CRYL1Q9Y2S2 319 aa27.39■■□□□ 1.98
SMARCC1-203ENST00000454240 PCDHB1Q9Y5F3 818 aa27.39■■□□□ 1.98
SMARCC1-203ENST00000454240 SLC5A10A0PJK1 596 aa27.38■■□□□ 1.97
SMARCC1-203ENST00000454240 MT-CO3P00414 261 aa27.38■■□□□ 1.97
SMARCC1-203ENST00000454240 VIPP01282 170 aa27.38■■□□□ 1.97
SMARCC1-203ENST00000454240 RPLP0P05388 317 aaKnown RBP27.38■■□□□ 1.97
SMARCC1-203ENST00000454240 PDHA2P29803 388 aa27.38■■□□□ 1.97
SMARCC1-203ENST00000454240 ALDH4A1P30038 563 aa27.38■■□□□ 1.97
SMARCC1-203ENST00000454240 CCR7P32248 378 aa27.38■■□□□ 1.97
SMARCC1-203ENST00000454240 EIF3BP55884 814 aaKnown RBP27.38■■□□□ 1.97
SMARCC1-203ENST00000454240 SHC2P98077 582 aa27.38■■□□□ 1.97
SMARCC1-203ENST00000454240 CTSL3PQ5NE16 218 aa27.38■■□□□ 1.97
SMARCC1-203ENST00000454240 CNTN4Q8IWV2 1026 aa27.38■■□□□ 1.97
SMARCC1-203ENST00000454240 SPDYE1Q8NFV5 336 aaPredicted RBP27.38■■□□□ 1.97
SMARCC1-203ENST00000454240 LKAAEAR1Q8TD35 194 aa27.38■■□□□ 1.97
SMARCC1-203ENST00000454240 CXorf40BQ96DE9 158 aa27.38■■□□□ 1.97
SMARCC1-203ENST00000454240 SLC38A3Q99624 504 aa27.38■■□□□ 1.97
SMARCC1-203ENST00000454240 LDHAL6BQ9BYZ2 381 aaPredicted RBP27.38■■□□□ 1.97
SMARCC1-203ENST00000454240 UCK1Q9HA47 277 aa27.38■■□□□ 1.97
SMARCC1-203ENST00000454240 SLC40A1Q9NP59 571 aa27.38■■□□□ 1.97
SMARCC1-203ENST00000454240 SAYSD1Q9NPB0 183 aa27.38■■□□□ 1.97
SMARCC1-203ENST00000454240 FAM114A2Q9NRY5 505 aa27.38■■□□□ 1.97
SMARCC1-203ENST00000454240 KLK13Q9UKR3 277 aa27.38■■□□□ 1.97
SMARCC1-203ENST00000454240 FBXO5Q9UKT4 447 aa27.38■■□□□ 1.97
SMARCC1-203ENST00000454240 KNTC1P50748 2209 aa27.38■■□□□ 1.97
SMARCC1-203ENST00000454240 ESPNB1AK53 854 aa27.37■■□□□ 1.97
SMARCC1-203ENST00000454240 ZW10O43264 779 aa27.37■■□□□ 1.97
SMARCC1-203ENST00000454240 TCEA3O75764 348 aa27.37■■□□□ 1.97
SMARCC1-203ENST00000454240 ESR1P03372 595 aa27.37■■□□□ 1.97
SMARCC1-203ENST00000454240 SLC35G4P0C7Q5 338 aa27.37■■□□□ 1.97
SMARCC1-203ENST00000454240 ITGB6P18564 788 aa27.37■■□□□ 1.97
SMARCC1-203ENST00000454240 SPINK2P20155 84 aa27.37■■□□□ 1.97
SMARCC1-203ENST00000454240 FMO4P31512 558 aa27.37■■□□□ 1.97
SMARCC1-203ENST00000454240 ZNF761Q86XN6 746 aaPredicted RBP27.37■■□□□ 1.97
SMARCC1-203ENST00000454240 TRIM48Q8IWZ4 208 aa27.37■■□□□ 1.97
SMARCC1-203ENST00000454240 KRT222Q8N1A0 295 aa27.37■■□□□ 1.97
SMARCC1-203ENST00000454240 DCBLD1Q8N8Z6 715 aa27.37■■□□□ 1.97
SMARCC1-203ENST00000454240 C2CD4AQ8NCU7 369 aaPredicted RBP27.37■■□□□ 1.97
SMARCC1-203ENST00000454240 PYROXD1Q8WU10 500 aa27.37■■□□□ 1.97
SMARCC1-203ENST00000454240 RMDN2Q96LZ7 410 aa27.37■■□□□ 1.97
SMARCC1-203ENST00000454240 PANX3Q96QZ0 392 aa27.37■■□□□ 1.97
SMARCC1-203ENST00000454240 FBXO6Q9NRD1 293 aaPredicted RBP27.37■■□□□ 1.97
SMARCC1-203ENST00000454240 CLCA2Q9UQC9 943 aa27.37■■□□□ 1.97
SMARCC1-203ENST00000454240 NEUROG3Q9Y4Z2 214 aa27.37■■□□□ 1.97
SMARCC1-203ENST00000454240 IGHV1OR21-1A0A087WYE8 117 aa27.36■■□□□ 1.97
SMARCC1-203ENST00000454240 PRAMEF33A0A0G2JMD5 474 aa27.36■■□□□ 1.97
SMARCC1-203ENST00000454240 MTHFD1P11586 935 aaKnown RBP27.36■■□□□ 1.97
SMARCC1-203ENST00000454240 JUPP14923 745 aa27.36■■□□□ 1.97
SMARCC1-203ENST00000454240 AOAHP28039 575 aa27.36■■□□□ 1.97
SMARCC1-203ENST00000454240 PREPP48147 710 aa27.36■■□□□ 1.97
SMARCC1-203ENST00000454240 CD151P48509 253 aa27.36■■□□□ 1.97
SMARCC1-203ENST00000454240 FOXK2Q01167 660 aa27.36■■□□□ 1.97
SMARCC1-203ENST00000454240 PLOD1Q02809 727 aaPredicted RBP27.36■■□□□ 1.97
SMARCC1-203ENST00000454240 SQSTM1Q13501 440 aa27.36■■□□□ 1.97
SMARCC1-203ENST00000454240 SPIDRQ14159 915 aa27.36■■□□□ 1.97
SMARCC1-203ENST00000454240 ZNF449Q6P9G9 518 aa27.36■■□□□ 1.97
SMARCC1-203ENST00000454240 TRMT10BQ6PF06 316 aaKnown RBP27.36■■□□□ 1.97
SMARCC1-203ENST00000454240 NAPRTQ6XQN6 538 aa27.36■■□□□ 1.97
SMARCC1-203ENST00000454240 TMEM26Q6ZUK4 368 aa27.36■■□□□ 1.97
SMARCC1-203ENST00000454240 RBM12BQ8IXT5 1001 aaKnown RBP27.36■■□□□ 1.97
SMARCC1-203ENST00000454240 GABPB2Q8TAK5 448 aaPredicted RBP27.36■■□□□ 1.97
SMARCC1-203ENST00000454240 GSDMBQ8TAX9 411 aa27.36■■□□□ 1.97
SMARCC1-203ENST00000454240 C12orf66Q96MD2 445 aa27.36■■□□□ 1.97
SMARCC1-203ENST00000454240 GFM1Q96RP9 751 aaKnown RBP27.36■■□□□ 1.97
SMARCC1-203ENST00000454240 KCNK4Q9NYG8 393 aa27.36■■□□□ 1.97
SMARCC1-203ENST00000454240 MOCS1Q9NZB8 636 aa27.36■■□□□ 1.97
SMARCC1-203ENST00000454240 FAM149AA5PLN7 773 aa27.35■■□□□ 1.97
SMARCC1-203ENST00000454240 LILRA5A6NI73 299 aa27.35■■□□□ 1.97
SMARCC1-203ENST00000454240 H3BMM5 538 aa27.35■■□□□ 1.97
SMARCC1-203ENST00000454240 F7P08709 466 aaPredicted RBP27.35■■□□□ 1.97
SMARCC1-203ENST00000454240 CD1CP29017 333 aa27.35■■□□□ 1.97
SMARCC1-203ENST00000454240 LEPRP48357 1165 aaKnown RBP27.35■■□□□ 1.97
SMARCC1-203ENST00000454240 BOP1Q14137 746 aaKnown RBP27.35■■□□□ 1.97
SMARCC1-203ENST00000454240 BRD3Q15059 726 aa27.35■■□□□ 1.97
SMARCC1-203ENST00000454240 TEDDM1Q5T9Z0 273 aa27.35■■□□□ 1.97
SMARCC1-203ENST00000454240 RBM44Q6ZP01 1051 aaKnown RBP27.35■■□□□ 1.97
SMARCC1-203ENST00000454240 FAM129AQ9BZQ8 928 aa27.35■■□□□ 1.97
SMARCC1-203ENST00000454240 IMP3Q9NV31 184 aaKnown RBP27.35■■□□□ 1.97
SMARCC1-203ENST00000454240 ANGPTL2Q9UKU9 493 aa27.35■■□□□ 1.97
SMARCC1-203ENST00000454240 CDYLQ9Y232 598 aa27.35■■□□□ 1.97
SMARCC1-203ENST00000454240 CFAP20Q9Y6A4 193 aaKnown RBP27.35■■□□□ 1.97
SMARCC1-203ENST00000454240 GPC4O75487 556 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms