RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 NMD3Q96D46 503 aaKnown RBP15.64■□□□□ 0.09
SNX17-204ENST00000453453 ATXN7L3BQ96GX2 97 aa15.64■□□□□ 0.09
SNX17-204ENST00000453453 VPS39Q96JC1 886 aa15.64■□□□□ 0.09
SNX17-204ENST00000453453 FAM83DQ9H4H8 585 aa15.64■□□□□ 0.09
SNX17-204ENST00000453453 OCEL1Q9H607 264 aa15.64■□□□□ 0.09
SNX17-204ENST00000453453 PREBQ9HCU5 417 aa15.64■□□□□ 0.09
SNX17-204ENST00000453453 IL26Q9NPH9 171 aa15.64■□□□□ 0.09
SNX17-204ENST00000453453 MRGBPQ9NV56 204 aa15.64■□□□□ 0.09
SNX17-204ENST00000453453 DNAAF2Q9NVR5 837 aaKnown RBP15.64■□□□□ 0.09
SNX17-204ENST00000453453 KCTD5Q9NXV2 234 aa15.64■□□□□ 0.09
SNX17-204ENST00000453453 NFKBIL1Q9UBC1 381 aaPredicted RBP15.64■□□□□ 0.09
SNX17-204ENST00000453453 COPG2Q9UBF2 871 aa15.64■□□□□ 0.09
SNX17-204ENST00000453453 CRLS1Q9UJA2 301 aa15.64■□□□□ 0.09
SNX17-204ENST00000453453 RIMS3Q9UJD0 308 aa15.64■□□□□ 0.09
SNX17-204ENST00000453453 FADS3Q9Y5Q0 445 aa15.64■□□□□ 0.09
SNX17-204ENST00000453453 WNT9AO14904 365 aa15.63■□□□□ 0.09
SNX17-204ENST00000453453 SPINT1O43278 529 aa15.63■□□□□ 0.09
SNX17-204ENST00000453453 LZTS3O60299 673 aaPredicted RBP15.63■□□□□ 0.09
SNX17-204ENST00000453453 S1PR4O95977 384 aa15.63■□□□□ 0.09
SNX17-204ENST00000453453 RALBP11234 206 aa15.63■□□□□ 0.09
SNX17-204ENST00000453453 CLCN5P51795 746 aa15.63■□□□□ 0.09
SNX17-204ENST00000453453 NADK2Q4G0N4 442 aa15.63■□□□□ 0.09
SNX17-204ENST00000453453 AGBL4Q5VU57 503 aa15.63■□□□□ 0.09
SNX17-204ENST00000453453 Q6ZS52 159 aa15.63■□□□□ 0.09
SNX17-204ENST00000453453 ZCCHC23Q6ZST2 131 aa15.63■□□□□ 0.09
SNX17-204ENST00000453453 USP30Q70CQ3 517 aa15.63■□□□□ 0.09
SNX17-204ENST00000453453 SYT13Q7L8C5 426 aa15.63■□□□□ 0.09
SNX17-204ENST00000453453 CPSF7Q8N684 471 aaKnown RBP15.63■□□□□ 0.09
SNX17-204ENST00000453453 POU5F2Q8N7G0 328 aa15.63■□□□□ 0.09
SNX17-204ENST00000453453 ULK4Q96C45 1275 aa15.63■□□□□ 0.09
SNX17-204ENST00000453453 CCDC68Q9H2F9 335 aa15.63■□□□□ 0.09
SNX17-204ENST00000453453 TBC1D17Q9HA65 648 aa15.63■□□□□ 0.09
SNX17-204ENST00000453453 MRPL40Q9NQ50 206 aaKnown RBP15.63■□□□□ 0.09
SNX17-204ENST00000453453 FZD4Q9ULV1 537 aa15.63■□□□□ 0.09
SNX17-204ENST00000453453 AP4B1Q9Y6B7 739 aa15.63■□□□□ 0.09
SNX17-204ENST00000453453 LRRK1Q38SD2 2015 aa15.63■□□□□ 0.09
SNX17-204ENST00000453453 GOLGA8QA0A0J9YX86 632 aa15.62■□□□□ 0.09
SNX17-204ENST00000453453 GOLGA8OA6NCC3 632 aa15.62■□□□□ 0.09
SNX17-204ENST00000453453 GOLGA8NF8WBI6 632 aa15.62■□□□□ 0.09
SNX17-204ENST00000453453 PCDH8O95206 1070 aa15.62■□□□□ 0.09
SNX17-204ENST00000453453 APOA4P06727 396 aa15.62■□□□□ 0.09
SNX17-204ENST00000453453 ETV3P41162 512 aa15.62■□□□□ 0.09
SNX17-204ENST00000453453 SLC12A2P55011 1212 aa15.62■□□□□ 0.09
SNX17-204ENST00000453453 NFATC2Q13469 925 aa15.62■□□□□ 0.09
SNX17-204ENST00000453453 PDE1CQ14123 709 aaPredicted RBP15.62■□□□□ 0.09
SNX17-204ENST00000453453 CHRNA6Q15825 494 aa15.62■□□□□ 0.09
SNX17-204ENST00000453453 IRAK1BP1Q5VVH5 260 aa15.62■□□□□ 0.09
SNX17-204ENST00000453453 PSAPL1Q6NUJ1 521 aa15.62■□□□□ 0.09
SNX17-204ENST00000453453 TMEM92Q6UXU6 159 aa15.62■□□□□ 0.09
SNX17-204ENST00000453453 BNC2Q6ZN30 1099 aaPredicted RBP15.62■□□□□ 0.09
SNX17-204ENST00000453453 FRMD7Q6ZUT3 714 aa15.62■□□□□ 0.09
SNX17-204ENST00000453453 Q6ZVL8 140 aa15.62■□□□□ 0.09
SNX17-204ENST00000453453 CYP2U1Q7Z449 544 aa15.62■□□□□ 0.09
SNX17-204ENST00000453453 LDB1Q86U70 411 aaPredicted RBP15.62■□□□□ 0.09
SNX17-204ENST00000453453 HPS6Q86YV9 775 aa15.62■□□□□ 0.09
SNX17-204ENST00000453453 ZNF687Q8N1G0 1237 aa15.62■□□□□ 0.09
SNX17-204ENST00000453453 RP9Q8TA86 221 aaKnown RBP15.62■□□□□ 0.09
SNX17-204ENST00000453453 BIRC8Q96P09 236 aa15.62■□□□□ 0.09
SNX17-204ENST00000453453 GPR22Q99680 433 aa15.62■□□□□ 0.09
SNX17-204ENST00000453453 ZSCAN5AQ9BUG6 496 aa15.62■□□□□ 0.09
SNX17-204ENST00000453453 FOXQ1Q9C009 403 aa15.62■□□□□ 0.09
SNX17-204ENST00000453453 MUTYHQ9UIF7 546 aa15.62■□□□□ 0.09
SNX17-204ENST00000453453 PRSS51A0A1B0GVH4 220 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 FAM95CA0A1B0GW59 222 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 UBA6A0AVT1 1052 aaPredicted RBP15.61■□□□□ 0.09
SNX17-204ENST00000453453 GOLGA8CPA6NN73 597 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 SLCO1B7G3V0H7 640 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 TPP1O14773 563 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 MMP20O60882 483 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 LYPLA1O75608 230 aaPredicted RBP15.61■□□□□ 0.09
SNX17-204ENST00000453453 ALDOAP04075 364 aaKnown RBP15.61■□□□□ 0.09
SNX17-204ENST00000453453 C6P13671 934 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 SEMA3AQ14563 771 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 DHRS4L2Q6PKH6 230 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 ZNF765Q7L2R6 523 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 TECPR1Q7Z6L1 1165 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 PGBD3Q8N328 593 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 DCLK2Q8N568 766 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 FLCNQ8NFG4 579 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 RDH11Q8TC12 318 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 NUS1Q96E22 293 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 TSPAN17Q96FV3 270 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 ELMO2Q96JJ3 720 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 MRGPRX1Q96LB2 322 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 COQ10AQ96MF6 247 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 MCMBPQ9BTE3 642 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 OSBPL6Q9BZF3 934 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 SLC6A17Q9H1V8 727 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 CD84Q9UIB8 345 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 SLC39A10Q9ULF5 831 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 GAPDHSO14556 408 aaPredicted RBP15.61■□□□□ 0.09
SNX17-204ENST00000453453 ZSCAN9O15535 394 aaPredicted RBP15.61■□□□□ 0.09
SNX17-204ENST00000453453 MPOP05164 745 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 F7P08709 466 aaPredicted RBP15.61■□□□□ 0.09
SNX17-204ENST00000453453 PRSS56P0CW18 603 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 C7P10643 843 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 NDUFV2P19404 249 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 GABRB3P28472 473 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 TYK2P29597 1187 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 PTGER3P43115 390 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms