RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 FGF5P12034 268 aa12.18□□□□□ -0.46
CPSF4-208ENST00000452047 ATP1B2P14415 290 aaPredicted RBP12.18□□□□□ -0.46
CPSF4-208ENST00000452047 TPH1P17752 444 aa12.18□□□□□ -0.46
CPSF4-208ENST00000452047 ITGB6P18564 788 aa12.18□□□□□ -0.46
CPSF4-208ENST00000452047 PSMA3P25788 255 aa12.18□□□□□ -0.46
CPSF4-208ENST00000452047 ACRV1P26436 265 aa12.18□□□□□ -0.46
CPSF4-208ENST00000452047 CDKN1CP49918 316 aaPredicted RBP12.18□□□□□ -0.46
CPSF4-208ENST00000452047 POU6F1Q14863 301 aa12.18□□□□□ -0.46
CPSF4-208ENST00000452047 PLCL1Q15111 1095 aa12.18□□□□□ -0.46
CPSF4-208ENST00000452047 CAPRIN2Q6IMN6 1127 aaKnown RBP12.18□□□□□ -0.46
CPSF4-208ENST00000452047 KLHL35Q6PF15 583 aa12.18□□□□□ -0.46
CPSF4-208ENST00000452047 UNC5BQ8IZJ1 945 aa12.18□□□□□ -0.46
CPSF4-208ENST00000452047 HEXDCQ8WVB3 486 aa12.18□□□□□ -0.46
CPSF4-208ENST00000452047 ZFPM2Q8WW38 1151 aa12.18□□□□□ -0.46
CPSF4-208ENST00000452047 UBXN4Q92575 508 aa12.18□□□□□ -0.46
CPSF4-208ENST00000452047 DCUN1D1Q96GG9 259 aa12.18□□□□□ -0.46
CPSF4-208ENST00000452047 SLC41A2Q96JW4 573 aa12.18□□□□□ -0.46
CPSF4-208ENST00000452047 ARHGAP9Q9BRR9 750 aa12.18□□□□□ -0.46
CPSF4-208ENST00000452047 ULBP3Q9BZM4 244 aa12.18□□□□□ -0.46
CPSF4-208ENST00000452047 TRIT1Q9H3H1 467 aaKnown RBP12.18□□□□□ -0.46
CPSF4-208ENST00000452047 KIR3DX1Q9H7L2 352 aa12.18□□□□□ -0.46
CPSF4-208ENST00000452047 GPN2Q9H9Y4 310 aaPredicted RBP12.18□□□□□ -0.46
CPSF4-208ENST00000452047 STARD5Q9NSY2 213 aa12.18□□□□□ -0.46
CPSF4-208ENST00000452047 PIH1D1Q9NWS0 290 aaKnown RBP12.18□□□□□ -0.46
CPSF4-208ENST00000452047 ZDHHC3Q9NYG2 299 aa12.18□□□□□ -0.46
CPSF4-208ENST00000452047 FAM8A1Q9UBU6 413 aa12.18□□□□□ -0.46
CPSF4-208ENST00000452047 IL17BQ9UHF5 180 aa12.18□□□□□ -0.46
CPSF4-208ENST00000452047 SLC24A2Q9UI40 661 aa12.18□□□□□ -0.46
CPSF4-208ENST00000452047 SETXQ7Z333 2677 aaKnown RBP12.17□□□□□ -0.46
CPSF4-208ENST00000452047 C17orf113A0A1B0GUU1 675 aa12.17□□□□□ -0.46
CPSF4-208ENST00000452047 MROH6A6NGR9 719 aa12.17□□□□□ -0.46
CPSF4-208ENST00000452047 ZNF891A8MT65 544 aaPredicted RBP12.17□□□□□ -0.46
CPSF4-208ENST00000452047 CFAP99D6REC4 459 aa12.17□□□□□ -0.46
CPSF4-208ENST00000452047 LIASO43766 372 aa12.17□□□□□ -0.46
CPSF4-208ENST00000452047 SERPINA9Q86WD7 417 aa12.17□□□□□ -0.46
CPSF4-208ENST00000452047 PIANPQ8IYJ0 282 aa12.17□□□□□ -0.46
CPSF4-208ENST00000452047 CFAP206Q8IYR0 622 aa12.17□□□□□ -0.46
CPSF4-208ENST00000452047 TAB3Q8N5C8 712 aaPredicted RBP12.17□□□□□ -0.46
CPSF4-208ENST00000452047 ESX1Q8N693 406 aa12.17□□□□□ -0.46
CPSF4-208ENST00000452047 STYXQ8WUJ0 223 aa12.17□□□□□ -0.46
CPSF4-208ENST00000452047 KIAA1143Q96AT1 154 aaPredicted RBP12.17□□□□□ -0.46
CPSF4-208ENST00000452047 CDKN2AIPNLQ96HQ2 116 aa12.17□□□□□ -0.46
CPSF4-208ENST00000452047 CD180Q99467 661 aa12.17□□□□□ -0.46
CPSF4-208ENST00000452047 MAP3K3Q99759 626 aa12.17□□□□□ -0.46
CPSF4-208ENST00000452047 CCM2Q9BSQ5 444 aa12.17□□□□□ -0.46
CPSF4-208ENST00000452047 TSGA10Q9BZW7 698 aa12.17□□□□□ -0.46
CPSF4-208ENST00000452047 OR52A5Q9H2C5 316 aa12.17□□□□□ -0.46
CPSF4-208ENST00000452047 COG4Q9H9E3 785 aa12.17□□□□□ -0.46
CPSF4-208ENST00000452047 UBR5O95071 2799 aaPredicted RBP12.17□□□□□ -0.46
CPSF4-208ENST00000452047 TLCD2A6NGC4 264 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 ERI2A8K979 691 aaKnown RBP12.16□□□□□ -0.46
CPSF4-208ENST00000452047 TERTO14746 1132 aaKnown RBP12.16□□□□□ -0.46
CPSF4-208ENST00000452047 NKX2-8O15522 239 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 PSMD3O43242 534 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 KRT86O43790 486 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 SPAG6O75602 509 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 KIAA0754O94854 1291 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 TIAF1O95411 115 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 POLBP06746 335 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 FOLR1P15328 257 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 F8A1P23610 371 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 STIP1P31948 543 aaKnown RBP12.16□□□□□ -0.46
CPSF4-208ENST00000452047 CACNG1Q06432 222 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 CDC20Q12834 499 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 NFATC3Q12968 1075 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 SEPT6Q14141 434 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 KCNAB1Q14722 419 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 DBN1Q16643 649 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.16□□□□□ -0.46
CPSF4-208ENST00000452047 CRTC2Q53ET0 693 aaPredicted RBP12.16□□□□□ -0.46
CPSF4-208ENST00000452047 ZRANB3Q5FWF4 1079 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 DNTTIP2Q5QJE6 756 aaKnown RBP12.16□□□□□ -0.46
CPSF4-208ENST00000452047 SEL1L2Q5TEA6 688 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 BORAQ6PGQ7 559 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 LINC00523Q86TU6 105 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 OOSP2Q86WS3 158 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 SLC13A5Q86YT5 568 aaPredicted RBP12.16□□□□□ -0.46
CPSF4-208ENST00000452047 CLDN19Q8N6F1 224 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 UBE2Q2Q8WVN8 375 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 STARD8Q92502 1023 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 RNF31Q96EP0 1072 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 ELMO2Q96JJ3 720 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 CATSPER2Q96P56 530 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 EFHD1Q9BUP0 239 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 FRMD8P1Q9BZ68 369 aaPredicted RBP12.16□□□□□ -0.46
CPSF4-208ENST00000452047 HRASLS2Q9NWW9 162 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 GEMIN8Q9NWZ8 242 aaKnown RBP12.16□□□□□ -0.46
CPSF4-208ENST00000452047 GUCA1BQ9UMX6 200 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 RPS6KL1Q9Y6S9 549 aa12.16□□□□□ -0.46
CPSF4-208ENST00000452047 MYO18BQ8IUG5 2567 aa12.15□□□□□ -0.46
CPSF4-208ENST00000452047 OR6C74A6NCV1 312 aa12.15□□□□□ -0.46
CPSF4-208ENST00000452047 J3QKU1 62 aa12.15□□□□□ -0.46
CPSF4-208ENST00000452047 SUN1O94901 812 aa12.15□□□□□ -0.46
CPSF4-208ENST00000452047 EBLN1P0CF75 366 aa12.15□□□□□ -0.46
CPSF4-208ENST00000452047 SFTPCP11686 197 aa12.15□□□□□ -0.46
CPSF4-208ENST00000452047 MSNP26038 577 aaKnown RBP12.15□□□□□ -0.46
CPSF4-208ENST00000452047 NDUFS1P28331 727 aa12.15□□□□□ -0.46
CPSF4-208ENST00000452047 OAS2P29728 719 aaKnown RBP12.15□□□□□ -0.46
CPSF4-208ENST00000452047 FOXN2P32314 431 aa12.15□□□□□ -0.46
CPSF4-208ENST00000452047 KPNA2P52292 529 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms