RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 RUNDC3AQ59EK9 446 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 MAP1SQ66K74 1059 aaPredicted RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 TMC8Q8IU68 726 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 GPC2Q8N158 579 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 SMG8Q8ND04 991 aaKnown RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 PIGXQ8TBF5 258 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 LRRC20Q8TCA0 184 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 TFAP2BQ92481 460 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 NDRG1Q92597 394 aaKnown RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 SLCO2A1Q92959 643 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 C8orf48Q96LL4 319 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 CEP295NLQ96MC4 621 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 PCDHAC1Q9H158 963 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 NMUR1Q9HB89 426 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 GOLGA2P5Q9HBQ8 144 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 CFL2Q9Y281 166 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 MRPS23Q9Y3D9 190 aaKnown RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 PRKAB1Q9Y478 270 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 MST1RQ04912 1400 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 FAM234BA2RU67 622 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 CCL22O00626 93 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 IRF6O14896 467 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 PRAMEF1O95521 474 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 MT-CYBP00156 380 aaPredicted RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 ANXA8P13928 327 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 CD247P20963 164 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 YAP1P46937 504 aaKnown RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 PNLIPRP1P54315 467 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 EEFSECP57772 596 aaKnown RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 RPL26P61254 145 aaKnown RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 RBBP4Q09028 425 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 DPY19L1Q2PZI1 675 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 ASTE1Q2TB18 679 aaPredicted RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 PLEKHG4Q58EX7 1191 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 MED27Q6P2C8 311 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 JAZF1Q86VZ6 243 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 PARGQ86W56 976 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 GPR152Q8TDT2 470 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 OR8D1Q8WZ84 308 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 PIWIL1Q96J94 861 aaKnown RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 KCNS3Q9BQ31 491 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 IMP3Q9NV31 184 aaKnown RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 GOLGA4Q13439 2230 aaKnown RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 IQCF5A8MTL0 148 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 NOBOXO60393 691 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 GADD45GO95257 159 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 GOT2P00505 430 aaKnown RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 SLURP2P0DP57 97 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 UNGP13051 313 aaPredicted RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 CD36P16671 472 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 TACR2P21452 398 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 SLC6A4P31645 630 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 OR2B6P58173 313 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 MTPNP58546 118 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 SLC9B1Q4ZJI4 515 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 RBM48Q5RL73 367 aaKnown RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 FAM91A1Q658Y4 838 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 SLC9A4Q6AI14 798 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 PYROXD2Q8N2H3 581 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 ZNF563Q8TA94 476 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 SLC35B2Q8TB61 432 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 EXOSC8Q96B26 276 aaKnown RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 RNF31Q96EP0 1072 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 DMRTB1Q96MA1 342 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 ZNF317Q96PQ6 595 aaPredicted RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 MTFR1LQ9H019 292 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 SIX2Q9NPC8 291 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 PAK6Q9NQU5 681 aaPredicted RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 SNTG1Q9NSN8 517 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 HECAQ9UBI9 543 aaPredicted RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 MTRRQ9UBK8 725 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 FZD1Q9UP38 647 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 MYOM1P52179 1685 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 SMIM35A0A1B0GVV1 85 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 RSL1D1O76021 490 aaKnown RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 DNTTP04053 509 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 UGT2B4P06133 528 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 POU2F1P14859 743 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 MAPK12P53778 367 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 LAPTM5Q13571 262 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 HSDL1Q3SXM5 330 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 ADNP2Q6IQ32 1131 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 GPR153Q6NV75 609 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 ZNF613Q6PF04 617 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 PRR23BQ6ZRT6 265 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 CPNE9Q8IYJ1 553 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 C9orf43Q8TAL5 461 aaPredicted RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 NEK7Q8TDX7 302 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 KAT2AQ92830 837 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 DNASE1L2Q92874 299 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 UFD1Q92890 307 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 ZNF347Q96SE7 839 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 HNRNPABQ99729 332 aaKnown RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 POLR2J2Q9GZM3 115 aaKnown RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 MARCH7Q9H992 704 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 TBC1D17Q9HA65 648 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 MAGEE1Q9HCI5 957 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 DTLQ9NZJ0 730 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 CALML5Q9NZT1 146 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms