RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 CSF2RAP15509 400 aa16.02■□□□□ 0.16
OTUB1-204ENST00000447683 ITGB6P18564 788 aa16.02■□□□□ 0.16
OTUB1-204ENST00000447683 CLCN2P51788 898 aa16.02■□□□□ 0.16
OTUB1-204ENST00000447683 SNRPD1P62314 119 aaKnown RBP16.02■□□□□ 0.16
OTUB1-204ENST00000447683 TRAF3Q13114 568 aa16.02■□□□□ 0.16
OTUB1-204ENST00000447683 CAPRIN1Q14444 709 aaKnown RBP16.02■□□□□ 0.16
OTUB1-204ENST00000447683 LCN8Q6JVE9 175 aa16.02■□□□□ 0.16
OTUB1-204ENST00000447683 CCDC149Q6ZUS6 474 aa16.02■□□□□ 0.16
OTUB1-204ENST00000447683 ARPINQ7Z6K5 226 aa16.02■□□□□ 0.16
OTUB1-204ENST00000447683 TSPAN33Q86UF1 283 aa16.02■□□□□ 0.16
OTUB1-204ENST00000447683 AQP12AQ8IXF9 295 aa16.02■□□□□ 0.16
OTUB1-204ENST00000447683 NXPE1Q8N323 547 aa16.02■□□□□ 0.16
OTUB1-204ENST00000447683 SFRP1Q8N474 314 aa16.02■□□□□ 0.16
OTUB1-204ENST00000447683 ZBTB2Q8N680 514 aa16.02■□□□□ 0.16
OTUB1-204ENST00000447683 PAF1Q8N7H5 531 aa16.02■□□□□ 0.16
OTUB1-204ENST00000447683 DCBLD1Q8N8Z6 715 aa16.02■□□□□ 0.16
OTUB1-204ENST00000447683 GOLM1Q8NBJ4 401 aa16.02■□□□□ 0.16
OTUB1-204ENST00000447683 OR4F6Q8NGB9 312 aa16.02■□□□□ 0.16
OTUB1-204ENST00000447683 METTL6Q8TCB7 284 aa16.02■□□□□ 0.16
OTUB1-204ENST00000447683 NAT14Q8WUY8 206 aa16.02■□□□□ 0.16
OTUB1-204ENST00000447683 TMEM125Q96AQ2 219 aa16.02■□□□□ 0.16
OTUB1-204ENST00000447683 YME1L1Q96TA2 773 aa16.02■□□□□ 0.16
OTUB1-204ENST00000447683 SLC46A2Q9BY10 475 aa16.02■□□□□ 0.16
OTUB1-204ENST00000447683 HEBP1Q9NRV9 189 aa16.02■□□□□ 0.16
OTUB1-204ENST00000447683 HS3ST2Q9Y278 367 aa16.02■□□□□ 0.16
OTUB1-204ENST00000447683 FAM234BA2RU67 622 aa16.02■□□□□ 0.15
OTUB1-204ENST00000447683 SYNCRIPO60506 623 aaKnown RBP16.02■□□□□ 0.15
OTUB1-204ENST00000447683 TRIM16O95361 564 aa16.02■□□□□ 0.15
OTUB1-204ENST00000447683 C8AP07357 584 aa16.02■□□□□ 0.15
OTUB1-204ENST00000447683 GJA1P17302 382 aa16.02■□□□□ 0.15
OTUB1-204ENST00000447683 CTSOP43234 321 aaPredicted RBP16.02■□□□□ 0.15
OTUB1-204ENST00000447683 HTR6P50406 440 aa16.02■□□□□ 0.15
OTUB1-204ENST00000447683 POLR2JP52435 117 aaKnown RBP16.02■□□□□ 0.15
OTUB1-204ENST00000447683 YBX1P67809 324 aaKnown RBP16.02■□□□□ 0.15
OTUB1-204ENST00000447683 CBX3Q13185 183 aa16.02■□□□□ 0.15
OTUB1-204ENST00000447683 MYLK3Q32MK0 819 aa16.02■□□□□ 0.15
OTUB1-204ENST00000447683 ATP6AP1LQ52LC2 224 aa16.02■□□□□ 0.15
OTUB1-204ENST00000447683 CRTC1Q6UUV9 634 aa16.02■□□□□ 0.15
OTUB1-204ENST00000447683 TPRG1Q6ZUI0 275 aa16.02■□□□□ 0.15
OTUB1-204ENST00000447683 TMEM199Q8N511 208 aa16.02■□□□□ 0.15
OTUB1-204ENST00000447683 SCRN2Q96FV2 425 aa16.02■□□□□ 0.15
OTUB1-204ENST00000447683 RPL10LQ96L21 214 aaKnown RBP16.02■□□□□ 0.15
OTUB1-204ENST00000447683 GBP5Q96PP8 586 aa16.02■□□□□ 0.15
OTUB1-204ENST00000447683 CORO1BQ9BR76 489 aa16.02■□□□□ 0.15
OTUB1-204ENST00000447683 C1orf50Q9BV19 199 aa16.02■□□□□ 0.15
OTUB1-204ENST00000447683 NSUN3Q9H649 340 aaKnown RBP16.02■□□□□ 0.15
OTUB1-204ENST00000447683 ELOVL2Q9NXB9 296 aa16.02■□□□□ 0.15
OTUB1-204ENST00000447683 UBAP1Q9NZ09 502 aa16.02■□□□□ 0.15
OTUB1-204ENST00000447683 LEF1Q9UJU2 399 aaPredicted RBP16.02■□□□□ 0.15
OTUB1-204ENST00000447683 CNOT6Q9ULM6 557 aaKnown RBP16.02■□□□□ 0.15
OTUB1-204ENST00000447683 SH3GLB1Q9Y371 365 aa16.02■□□□□ 0.15
OTUB1-204ENST00000447683 OTCP00480 354 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 IL12AP29459 219 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 GSTT1P30711 240 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 GRIA3P42263 894 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 STK19P49842 368 aaPredicted RBP16.01■□□□□ 0.15
OTUB1-204ENST00000447683 CDKL1Q00532 357 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 NFYCQ13952 458 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 CRY1Q16526 586 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 PAGE3Q5JUK9 113 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 HMBOX1Q6NT76 420 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 CMTM8Q8IZV2 173 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 GALNT4Q8N4A0 578 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 FNDC5Q8NAU1 212 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 GPR26Q8NDV2 337 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 PROKR1Q8TCW9 393 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 CANT1Q8WVQ1 401 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 VPS33AQ96AX1 596 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 EME1Q96AY2 570 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 TRIM15Q9C019 465 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 CCM2LQ9NUG4 571 aaPredicted RBP16.01■□□□□ 0.15
OTUB1-204ENST00000447683 ACTR3BQ9P1U1 418 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 TSR3Q9UJK0 312 aaKnown RBP16.01■□□□□ 0.15
OTUB1-204ENST00000447683 ZFC3H1O60293 1989 aaKnown RBP16.01■□□□□ 0.15
OTUB1-204ENST00000447683 CCDC154A6NI56 674 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 ZNF839A8K0R7 811 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 TIMP1P01033 207 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 LINC00271P0C7V0 271 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 HLA-FP30511 346 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 CA8P35219 290 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 HSPA7P48741 367 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 EMX2Q04743 252 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 C22orf39Q6P5X5 142 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 UBTD2Q8WUN7 234 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 MUC13Q9H3R2 512 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 IPPKQ9H8X2 491 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 RDH14Q9HBH5 336 aa16.01■□□□□ 0.15
OTUB1-204ENST00000447683 DYTNA2CJ06 578 aa16■□□□□ 0.15
OTUB1-204ENST00000447683 GRXCR2A6NFK2 248 aa16■□□□□ 0.15
OTUB1-204ENST00000447683 LSM1O15116 133 aaKnown RBP16■□□□□ 0.15
OTUB1-204ENST00000447683 PHKG1Q16816 387 aa16■□□□□ 0.15
OTUB1-204ENST00000447683 SULT1C3Q6IMI6 304 aa16■□□□□ 0.15
OTUB1-204ENST00000447683 METTL2BQ6P1Q9 378 aaKnown RBP16■□□□□ 0.15
OTUB1-204ENST00000447683 IL27RAQ6UWB1 636 aa16■□□□□ 0.15
OTUB1-204ENST00000447683 RNF165Q6ZSG1 346 aa16■□□□□ 0.15
OTUB1-204ENST00000447683 ZFAND4Q86XD8 727 aa16■□□□□ 0.15
OTUB1-204ENST00000447683 ELMOD1Q8N336 334 aa16■□□□□ 0.15
OTUB1-204ENST00000447683 KREMEN2Q8NCW0 462 aa16■□□□□ 0.15
OTUB1-204ENST00000447683 ZNF597Q96LX8 424 aa16■□□□□ 0.15
OTUB1-204ENST00000447683 MCCC1Q96RQ3 725 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms