RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 OR2A25A4D2G3 310 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 RGS10O43665 173 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 MAP3K6O95382 1288 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 MAGP20916 626 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 FMO4P31512 558 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 PIGAP37287 484 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 GLUD2P49448 558 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 MAP3K7CLP57077 242 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 RAB10P61026 200 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 GRIK2Q13002 908 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 SURF1Q15526 300 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 AAK1Q2M2I8 961 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 UGT3A2Q3SY77 523 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 VPS26BQ4G0F5 336 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 SH3PXD2AQ5TCZ1 1133 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 SULT1C3Q6IMI6 304 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 GPR142Q7Z601 462 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 HID1Q8IV36 788 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 MICU2Q8IYU8 434 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 IPCEF1Q8WWN9 437 aaPredicted RBP18.93■□□□□ 0.62
HMGA1-205ENST00000447654 CDADC1Q9BWV3 514 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 BCO2Q9BYV7 579 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 PRMT7Q9NVM4 692 aaPredicted RBP18.93■□□□□ 0.62
HMGA1-205ENST00000447654 H3BRB1 525 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 PRMT5O14744 637 aaPredicted RBP18.92■□□□□ 0.62
HMGA1-205ENST00000447654 FTH1P02794 183 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 CYP11A1P05108 521 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 ALDOCP09972 364 aaKnown RBP18.92■□□□□ 0.62
HMGA1-205ENST00000447654 HNRNPLP14866 589 aaKnown RBP eCLIP18.92■□□□□ 0.62
HMGA1-205ENST00000447654 HRH2P25021 359 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 TIE1P35590 1138 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 NKX3-2P78367 333 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 CAPRIN1Q14444 709 aaKnown RBP18.92■□□□□ 0.62
HMGA1-205ENST00000447654 FAM187BQ17R55 369 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 BLOC1S3Q6QNY0 202 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 ST13P5Q8NFI4 369 aaPredicted RBP18.92■□□□□ 0.62
HMGA1-205ENST00000447654 OR2A14Q96R47 310 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 ITPAQ9BY32 194 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 PRDM8Q9NQV8 689 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 SDR39U1Q9NRG7 319 aaPredicted RBP18.92■□□□□ 0.62
HMGA1-205ENST00000447654 ZSWIM8A7E2V4 1837 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 TRIP11Q15643 1979 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 A0A1W2PP18 115 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 GRXCR2A6NFK2 248 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 H3BQ06 376 aaPredicted RBP18.92■□□□□ 0.62
HMGA1-205ENST00000447654 EEF2KO00418 725 aaKnown RBP18.92■□□□□ 0.62
HMGA1-205ENST00000447654 AIREO43918 545 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 CPNE3O75131 537 aaKnown RBP18.92■□□□□ 0.62
HMGA1-205ENST00000447654 DBTP11182 482 aaKnown RBP18.92■□□□□ 0.62
HMGA1-205ENST00000447654 PSKH1P11801 424 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 ZNF30P17039 623 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 UQCRC1P31930 480 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 MTHFRP42898 656 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 MAP2K4P45985 399 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 MASP1P48740 699 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 NPY2RP49146 381 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 TKTL1P51854 596 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 FSCN1Q16658 493 aaKnown RBP18.92■□□□□ 0.62
HMGA1-205ENST00000447654 BSPRYQ5W0U4 402 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 SDE2Q6IQ49 451 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 NRARPQ7Z6K4 114 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 SLC22A9Q8IVM8 553 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 ACVR1CQ8NER5 493 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 EMID1Q96A84 441 aaPredicted RBP18.92■□□□□ 0.62
HMGA1-205ENST00000447654 C19orf60Q96EN9 201 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 TOE1Q96GM8 510 aaKnown RBP18.92■□□□□ 0.62
HMGA1-205ENST00000447654 PDLIM5Q96HC4 596 aaKnown RBP18.92■□□□□ 0.62
HMGA1-205ENST00000447654 ZSCAN5AQ9BUG6 496 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 ELOVL4Q9GZR5 314 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.92■□□□□ 0.624e-6■■■■□ 20.4
HMGA1-205ENST00000447654 MIR1-1HGQ9H1L0 117 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 SLC52A3Q9NQ40 469 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 TMEM45AQ9NWC5 275 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 TBC1D24Q9ULP9 559 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 ORC6Q9Y5N6 252 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 KCNE2Q9Y6J6 123 aa18.92■□□□□ 0.62
HMGA1-205ENST00000447654 ERI2A8K979 691 aaKnown RBP18.91■□□□□ 0.62
HMGA1-205ENST00000447654 GZMKP49863 264 aa18.91■□□□□ 0.62
HMGA1-205ENST00000447654 FPGSQ05932 587 aa18.91■□□□□ 0.62
HMGA1-205ENST00000447654 NAT16Q8N8M0 369 aa18.91■□□□□ 0.62
HMGA1-205ENST00000447654 NPLOC4Q8TAT6 608 aa18.91■□□□□ 0.62
HMGA1-205ENST00000447654 DEDD2Q8WXF8 326 aa18.91■□□□□ 0.62
HMGA1-205ENST00000447654 ZNF578Q96N58 590 aaPredicted RBP18.91■□□□□ 0.62
HMGA1-205ENST00000447654 CASS4Q9NQ75 786 aa18.91■□□□□ 0.62
HMGA1-205ENST00000447654 COMMD8Q9NX08 183 aa18.91■□□□□ 0.62
HMGA1-205ENST00000447654 TEKT2Q9UIF3 430 aa18.91■□□□□ 0.62
HMGA1-205ENST00000447654 IPO13O94829 963 aaKnown RBP18.91■□□□□ 0.62
HMGA1-205ENST00000447654 NCK1P16333 377 aa18.91■□□□□ 0.62
HMGA1-205ENST00000447654 DNAJB2P25686 324 aa18.91■□□□□ 0.62
HMGA1-205ENST00000447654 YWHAQP27348 245 aa18.91■□□□□ 0.62
HMGA1-205ENST00000447654 HLA-DMAP28067 261 aa18.91■□□□□ 0.62
HMGA1-205ENST00000447654 SDC4P31431 198 aa18.91■□□□□ 0.62
HMGA1-205ENST00000447654 MAPK12P53778 367 aa18.91■□□□□ 0.62
HMGA1-205ENST00000447654 CDH13P55290 713 aa18.91■□□□□ 0.62
HMGA1-205ENST00000447654 NFYCQ13952 458 aa18.91■□□□□ 0.62
HMGA1-205ENST00000447654 TRNP1Q6NT89 227 aa18.91■□□□□ 0.62
HMGA1-205ENST00000447654 SCYL2Q6P3W7 929 aa18.91■□□□□ 0.62
HMGA1-205ENST00000447654 RANGRFQ9HD47 186 aaPredicted RBP18.91■□□□□ 0.62
HMGA1-205ENST00000447654 CHST12Q9NRB3 414 aa18.91■□□□□ 0.62
HMGA1-205ENST00000447654 GPATCH2LQ9NWQ4 482 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms