RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 NFATC2Q13469 925 aa13.89□□□□□ -0.19
SMARCA4-204ENST00000444061 FLOT2Q14254 428 aa13.89□□□□□ -0.19
SMARCA4-204ENST00000444061 MLF2Q15773 248 aaPredicted RBP13.89□□□□□ -0.19
SMARCA4-204ENST00000444061 R3HCC1LQ7Z5L2 792 aaKnown RBP13.89□□□□□ -0.19
SMARCA4-204ENST00000444061 MRM3Q9HC36 420 aaKnown RBP13.89□□□□□ -0.19
SMARCA4-204ENST00000444061 MRPS30Q9NP92 439 aaKnown RBP13.89□□□□□ -0.19
SMARCA4-204ENST00000444061 NDUFA13Q9P0J0 144 aa13.89□□□□□ -0.19
SMARCA4-204ENST00000444061 MRASO14807 208 aa13.89□□□□□ -0.19
SMARCA4-204ENST00000444061 HLA-FP30511 346 aa13.89□□□□□ -0.19
SMARCA4-204ENST00000444061 ATP6V1E1P36543 226 aa13.89□□□□□ -0.19
SMARCA4-204ENST00000444061 MED21Q13503 144 aa13.89□□□□□ -0.19
SMARCA4-204ENST00000444061 TRIM40Q6P9F5 258 aa13.89□□□□□ -0.19
SMARCA4-204ENST00000444061 TMEM154Q6P9G4 183 aa13.89□□□□□ -0.19
SMARCA4-204ENST00000444061 UNC5BQ8IZJ1 945 aa13.89□□□□□ -0.19
SMARCA4-204ENST00000444061 ANLNQ9NQW6 1124 aa13.89□□□□□ -0.19
SMARCA4-204ENST00000444061 PAIP2BQ9ULR5 123 aaKnown RBP13.89□□□□□ -0.19
SMARCA4-204ENST00000444061 YBX2Q9Y2T7 364 aaKnown RBP13.89□□□□□ -0.19
SMARCA4-204ENST00000444061 IRAK3Q9Y616 596 aa13.89□□□□□ -0.19
SMARCA4-204ENST00000444061 HHLA1C9JL84 531 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 UBXN8O00124 270 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 SMAD6O43541 496 aaKnown RBP13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 LINC00032P0C843 101 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 HOXD9P28356 352 aaPredicted RBP13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 HOXC13P31276 330 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 FAM129CQ86XR2 697 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 PEX13Q92968 403 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 MSANTD3Q96H12 275 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 ASB16Q96NS5 453 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 MAP10Q9P2G4 905 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 ZNF490Q9ULM2 529 aaPredicted RBP13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 PLK4O00444 970 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 DUSP3P51452 185 aaPredicted RBP13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 PSMD7P51665 324 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 PRRT3Q5FWE3 981 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 CD248Q9HCU0 757 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 SIT1Q9Y3P8 196 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 MTF2Q9Y483 593 aaPredicted RBP13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 ZNF780BQ9Y6R6 833 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 TRAFD1O14545 582 aaPredicted RBP13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 PNLIPRP1P54315 467 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 AP1S2P56377 157 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 BHLHB9Q6PI77 547 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 PARM1Q6UWI2 310 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 TDRPQ86YL5 185 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 FSTL5Q8N475 847 aaPredicted RBP13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 KYQ8NBH2 561 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 METTL21AQ8WXB1 218 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 ISG20Q96AZ6 181 aaKnown RBP13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 SCRN2Q96FV2 425 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 TFB2MQ9H5Q4 396 aaKnown RBP13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 CROTQ9UKG9 612 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 EPN2O95208 641 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 HNRNPCP07910 306 aaKnown RBP eCLIP13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 CLCQ05315 142 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 GTF2H2Q13888 395 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 GNA13Q14344 377 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 GTF2H2CQ6P1K8 395 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 SIGLEC10Q96LC7 697 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 MGME1Q9BQP7 344 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 OR10H1Q9Y4A9 318 aa13.88□□□□□ -0.19
SMARCA4-204ENST00000444061 JUNDP17535 347 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 CALB2P22676 271 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 HK2P52789 917 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 LPAL2Q16609 132 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 PHF19Q5T6S3 580 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 EGFLAMQ63HQ2 1017 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 ZCCHC8Q6NZY4 707 aaKnown RBP13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 C16orf87Q6PH81 154 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 CAMKK1Q8N5S9 505 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 NDEL1Q9GZM8 345 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 ZDHHC18Q9NUE0 388 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 SLC17A6Q9P2U8 582 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 ACTL7AQ9Y615 435 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 TK2O00142 265 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 CHRM1P11229 460 aaPredicted RBP13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 SERPINB3P29508 390 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 VHLP40337 213 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 LCP2Q13094 533 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 KPNB1Q14974 876 aaKnown RBP13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 MINDY4Q4G0A6 757 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 FAM109BQ6ICB4 259 aaPredicted RBP13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 ZYG11AQ6WRX3 759 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 C11orf74Q86VG3 221 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 KIF2BQ8N4N8 673 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 DCBLD1Q8N8Z6 715 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 APOLD1Q96LR9 279 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 FZD3Q9NPG1 666 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 CHCHD3Q9NX63 227 aaKnown RBP13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 EIF2B4Q9UI10 523 aaKnown RBP13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 ACSL5Q9ULC5 683 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 TEX264Q9Y6I9 313 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 NDUFB5O43674 189 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 B4GALT3O60512 393 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 ZNF682O95780 498 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 NTRK1P04629 796 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 SYPP08247 313 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 CBSLP0DN79 551 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 CBSP35520 551 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 SCTRP47872 440 aa13.87□□□□□ -0.19
SMARCA4-204ENST00000444061 CSTF1Q05048 431 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms