RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 C9P02748 559 aa20.58■□□□□ 0.89
CDKN3-204ENST00000442975 ANKRD34CP0C6C1 535 aa20.58■□□□□ 0.89
CDKN3-204ENST00000442975 ADRA1DP25100 572 aa20.58■□□□□ 0.89
CDKN3-204ENST00000442975 VPS41P49754 854 aa20.58■□□□□ 0.89
CDKN3-204ENST00000442975 TRIP13Q15645 432 aaPredicted RBP20.58■□□□□ 0.89
CDKN3-204ENST00000442975 XKR5Q6UX68 686 aa20.58■□□□□ 0.89
CDKN3-204ENST00000442975 OR6P1Q8NGX9 317 aa20.58■□□□□ 0.89
CDKN3-204ENST00000442975 HDAC10Q969S8 669 aa20.58■□□□□ 0.89
CDKN3-204ENST00000442975 BBC3Q96PG8 261 aaPredicted RBP20.58■□□□□ 0.89
CDKN3-204ENST00000442975 CCM2Q9BSQ5 444 aa20.58■□□□□ 0.89
CDKN3-204ENST00000442975 B3GNT4Q9C0J1 378 aa20.58■□□□□ 0.89
CDKN3-204ENST00000442975 COG4Q9H9E3 785 aa20.58■□□□□ 0.89
CDKN3-204ENST00000442975 DRG1Q9Y295 367 aaKnown RBP20.58■□□□□ 0.89
CDKN3-204ENST00000442975 EIF4E1BA6NMX2 242 aaKnown RBP20.57■□□□□ 0.88
CDKN3-204ENST00000442975 ZSCAN12O43309 604 aa20.57■□□□□ 0.88
CDKN3-204ENST00000442975 KIF1CO43896 1103 aaKnown RBP20.57■□□□□ 0.88
CDKN3-204ENST00000442975 GOT2P00505 430 aaKnown RBP20.57■□□□□ 0.88
CDKN3-204ENST00000442975 FOXN2P32314 431 aa20.57■□□□□ 0.88
CDKN3-204ENST00000442975 PREPP48147 710 aa20.57■□□□□ 0.88
CDKN3-204ENST00000442975 ATP1A2P50993 1020 aa20.57■□□□□ 0.88
CDKN3-204ENST00000442975 PPP1CAP62136 330 aa20.57■□□□□ 0.88
CDKN3-204ENST00000442975 PRAMEP78395 509 aa20.57■□□□□ 0.88
CDKN3-204ENST00000442975 FOXM1Q08050 763 aa20.57■□□□□ 0.88
CDKN3-204ENST00000442975 SOWAHCQ53LP3 525 aaPredicted RBP20.57■□□□□ 0.88
CDKN3-204ENST00000442975 CACHD1Q5VU97 1274 aa20.57■□□□□ 0.88
CDKN3-204ENST00000442975 KLHL35Q6PF15 583 aa20.57■□□□□ 0.88
CDKN3-204ENST00000442975 C4orf22Q6V702 233 aa20.57■□□□□ 0.88
CDKN3-204ENST00000442975 MS4A14Q96JA4 679 aa20.57■□□□□ 0.88
CDKN3-204ENST00000442975 ZNF778Q96MU6 729 aa20.57■□□□□ 0.88
CDKN3-204ENST00000442975 RANBP9Q96S59 729 aa20.57■□□□□ 0.88
CDKN3-204ENST00000442975 AP1M1Q9BXS5 423 aa20.57■□□□□ 0.88
CDKN3-204ENST00000442975 APMAPQ9HDC9 416 aa20.57■□□□□ 0.88
CDKN3-204ENST00000442975 TTC7AQ9ULT0 858 aaPredicted RBP20.57■□□□□ 0.88
CDKN3-204ENST00000442975 AHCTF1Q8WYP5 2266 aa20.57■□□□□ 0.88
CDKN3-204ENST00000442975 K7ENP7 123 aa20.56■□□□□ 0.88
CDKN3-204ENST00000442975 IFRD1O00458 451 aaPredicted RBP20.56■□□□□ 0.88
CDKN3-204ENST00000442975 AP2A2O94973 939 aa20.56■□□□□ 0.88
CDKN3-204ENST00000442975 NSG1P42857 185 aa20.56■□□□□ 0.88
CDKN3-204ENST00000442975 CRADDP78560 199 aa20.56■□□□□ 0.88
CDKN3-204ENST00000442975 MC2RQ01718 297 aa20.56■□□□□ 0.88
CDKN3-204ENST00000442975 ITIH4Q14624 930 aa20.56■□□□□ 0.88
CDKN3-204ENST00000442975 SYTL3Q4VX76 610 aa20.56■□□□□ 0.88
CDKN3-204ENST00000442975 ZNF449Q6P9G9 518 aa20.56■□□□□ 0.88
CDKN3-204ENST00000442975 INO80CQ6PI98 192 aaPredicted RBP20.56■□□□□ 0.88
CDKN3-204ENST00000442975 NLRP9Q7RTR0 991 aa20.56■□□□□ 0.88
CDKN3-204ENST00000442975 PRSS42Q7Z5A4 293 aa20.56■□□□□ 0.88
CDKN3-204ENST00000442975 DTX1Q86Y01 620 aa20.56■□□□□ 0.88
CDKN3-204ENST00000442975 SLC35F6Q8N357 371 aa20.56■□□□□ 0.88
CDKN3-204ENST00000442975 ANP32BQ92688 251 aaKnown RBP20.56■□□□□ 0.88
CDKN3-204ENST00000442975 RNF31Q96EP0 1072 aa20.56■□□□□ 0.88
CDKN3-204ENST00000442975 TEFMQ96QE5 360 aaKnown RBP20.56■□□□□ 0.88
CDKN3-204ENST00000442975 KCNF1Q9H3M0 494 aa20.56■□□□□ 0.88
CDKN3-204ENST00000442975 ZNF768Q9H5H4 540 aaKnown RBP20.56■□□□□ 0.88
CDKN3-204ENST00000442975 TRMT1Q9NXH9 659 aaKnown RBP20.56■□□□□ 0.88
CDKN3-204ENST00000442975 SLC24A2Q9UI40 661 aa20.56■□□□□ 0.88
CDKN3-204ENST00000442975 SSUH2Q9Y2M2 353 aa20.56■□□□□ 0.88
CDKN3-204ENST00000442975 PRSS21Q9Y6M0 314 aa20.56■□□□□ 0.88
CDKN3-204ENST00000442975 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.55■□□□□ 0.88
CDKN3-204ENST00000442975 POLR1CO15160 346 aaPredicted RBP20.55■□□□□ 0.88
CDKN3-204ENST00000442975 KIF5CO60282 957 aa20.55■□□□□ 0.88
CDKN3-204ENST00000442975 PSMA3P25788 255 aa20.55■□□□□ 0.88
CDKN3-204ENST00000442975 DNTTIP2Q5QJE6 756 aaKnown RBP20.55■□□□□ 0.88
CDKN3-204ENST00000442975 KIAA1614Q5VZ46 1190 aa20.55■□□□□ 0.88
CDKN3-204ENST00000442975 CEACAM20Q6UY09 585 aa20.55■□□□□ 0.88
CDKN3-204ENST00000442975 OOSP2Q86WS3 158 aa20.55■□□□□ 0.88
CDKN3-204ENST00000442975 IL22RA1Q8N6P7 574 aa20.55■□□□□ 0.88
CDKN3-204ENST00000442975 PBKQ96KB5 322 aa20.55■□□□□ 0.88
CDKN3-204ENST00000442975 TTC1Q99614 292 aa20.55■□□□□ 0.88
CDKN3-204ENST00000442975 KIR3DX1Q9H7L2 352 aa20.55■□□□□ 0.88
CDKN3-204ENST00000442975 SIDT1Q9NXL6 827 aaKnown RBP20.55■□□□□ 0.88
CDKN3-204ENST00000442975 HEBP2Q9Y5Z4 205 aa20.55■□□□□ 0.88
CDKN3-204ENST00000442975 COLEC10Q9Y6Z7 277 aa20.55■□□□□ 0.88
CDKN3-204ENST00000442975 C17orf113A0A1B0GUU1 675 aa20.54■□□□□ 0.88
CDKN3-204ENST00000442975 OR5K3A6NET4 321 aa20.54■□□□□ 0.88
CDKN3-204ENST00000442975 PGRMC1O00264 195 aaKnown RBP20.54■□□□□ 0.88
CDKN3-204ENST00000442975 TOX3O15405 576 aaPredicted RBP20.54■□□□□ 0.88
CDKN3-204ENST00000442975 OR1I1O60431 355 aa20.54■□□□□ 0.88
CDKN3-204ENST00000442975 FTH1P02794 183 aa20.54■□□□□ 0.88
CDKN3-204ENST00000442975 ARCN1P48444 511 aaKnown RBP20.54■□□□□ 0.88
CDKN3-204ENST00000442975 SH3BP2P78314 561 aa20.54■□□□□ 0.88
CDKN3-204ENST00000442975 BOP1Q14137 746 aaKnown RBP20.54■□□□□ 0.88
CDKN3-204ENST00000442975 FASTKD1Q53R41 847 aaKnown RBP20.54■□□□□ 0.88
CDKN3-204ENST00000442975 TAF1BQ53T94 588 aaPredicted RBP20.54■□□□□ 0.88
CDKN3-204ENST00000442975 LYPLAL1Q5VWZ2 237 aa20.54■□□□□ 0.88
CDKN3-204ENST00000442975 CAPRIN2Q6IMN6 1127 aaKnown RBP20.54■□□□□ 0.88
CDKN3-204ENST00000442975 ARMC6Q6NXE6 501 aa20.54■□□□□ 0.88
CDKN3-204ENST00000442975 TTC27Q6P3X3 843 aa20.54■□□□□ 0.88
CDKN3-204ENST00000442975 PACS1Q6VY07 963 aa20.54■□□□□ 0.88
CDKN3-204ENST00000442975 REXO1L1PQ8IX06 675 aa20.54■□□□□ 0.88
CDKN3-204ENST00000442975 OR4L1Q8NH43 312 aa20.54■□□□□ 0.88
CDKN3-204ENST00000442975 ELMO1Q92556 727 aa20.54■□□□□ 0.88
CDKN3-204ENST00000442975 MAGOHBQ96A72 148 aaKnown RBP20.54■□□□□ 0.88
CDKN3-204ENST00000442975 ELMO2Q96JJ3 720 aa20.54■□□□□ 0.88
CDKN3-204ENST00000442975 FBXO8Q9NRD0 319 aa20.54■□□□□ 0.88
CDKN3-204ENST00000442975 CHRAC1Q9NRG0 131 aa20.54■□□□□ 0.88
CDKN3-204ENST00000442975 HRASLS2Q9NWW9 162 aa20.54■□□□□ 0.88
CDKN3-204ENST00000442975 BFARQ9NZS9 450 aa20.54■□□□□ 0.88
CDKN3-204ENST00000442975 EPHA6Q9UF33 1036 aa20.54■□□□□ 0.88
CDKN3-204ENST00000442975 RIMKLBQ9ULI2 386 aa20.54■□□□□ 0.88
CDKN3-204ENST00000442975 OR6C74A6NCV1 312 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms