RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 HBQ1P09105 142 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 FAM87AP0C7U9 286 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 MTHFD1P11586 935 aaKnown RBP7.61□□□□□ -1.19
CD44-211ENST00000442151 RPL10P27635 214 aaKnown RBP7.61□□□□□ -1.19
CD44-211ENST00000442151 CD68P34810 354 aaPredicted RBP7.61□□□□□ -1.19
CD44-211ENST00000442151 CTNNA1P35221 906 aaKnown RBP7.61□□□□□ -1.19
CD44-211ENST00000442151 DLSTP36957 453 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 SEPHS1P49903 392 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 POLE2P56282 527 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 HSD11B2P80365 405 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 RPA4Q13156 261 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 GPR18Q14330 331 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 SEPT7Q16181 437 aaKnown RBP7.61□□□□□ -1.19
CD44-211ENST00000442151 RPE65Q16518 533 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 PARP6Q2NL67 630 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 P3H1Q32P28 736 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 BCL7AQ4VC05 210 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 DNTTIP2Q5QJE6 756 aaKnown RBP7.61□□□□□ -1.19
CD44-211ENST00000442151 ZNF648Q5T619 568 aaPredicted RBP7.61□□□□□ -1.19
CD44-211ENST00000442151 LYPLAL1Q5VWZ2 237 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 C16orf46Q6P387 395 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 FAM151BQ6UXP7 276 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 KIAA1328Q86T90 577 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 LINC00523Q86TU6 105 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 HPS6Q86YV9 775 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 RASGEF1AQ8N9B8 481 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 RNF214Q8ND24 703 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.61□□□□□ -1.19
CD44-211ENST00000442151 COPS8Q99627 209 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 C17orf62Q9BQA9 187 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 TSSK1BQ9BXA7 367 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 FRMD8P1Q9BZ68 369 aaPredicted RBP7.61□□□□□ -1.19
CD44-211ENST00000442151 NPDC1Q9NQX5 325 aaPredicted RBP7.61□□□□□ -1.19
CD44-211ENST00000442151 SEMA5BQ9P283 1151 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 SAE1Q9UBE0 346 aaPredicted RBP7.61□□□□□ -1.19
CD44-211ENST00000442151 HYOU1Q9Y4L1 999 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 PCDHGA6Q9Y5G7 932 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 SPO11Q9Y5K1 396 aa7.61□□□□□ -1.19
CD44-211ENST00000442151 IGSF10Q6WRI0 2623 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 SETXQ7Z333 2677 aaKnown RBP7.6□□□□□ -1.19
CD44-211ENST00000442151 LOC101059948A0A1B0GTJ6 334 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 TLCD2A6NGC4 264 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 PRR19A6NJB7 356 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 AP3B1O00203 1094 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 KCNN4O15554 427 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 UGT1A9O60656 530 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 KATNA1O75449 491 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 KIAA0754O94854 1291 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 AP2A2O94973 939 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 PRAMEF1O95521 474 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 ZBTB11O95625 1053 aaPredicted RBP7.6□□□□□ -1.19
CD44-211ENST00000442151 IGHEP01854 428 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 RBP3P10745 1247 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 PECAM1P16284 738 aaPredicted RBP7.6□□□□□ -1.19
CD44-211ENST00000442151 UGT1A6P19224 532 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 UGT1A1P22309 533 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 UGT1A4P22310 534 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 VARSP26640 1264 aaKnown RBP7.6□□□□□ -1.19
CD44-211ENST00000442151 RBL1P28749 1068 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 CD151P48509 253 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 GSDMDP57764 484 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 KIF5AQ12840 1032 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 CLCA4Q14CN2 919 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 DEFB109BQ30KR1 87 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 LACTB2Q53H82 288 aaPredicted RBP7.6□□□□□ -1.19
CD44-211ENST00000442151 ANKRD20A2Q5SQ80 823 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 FNBP1LQ5T0N5 605 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 ANKRD20A1Q5TYW2 823 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 ANKRD20A3Q5VUR7 823 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 RANBP10Q6VN20 620 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 ARHGEF18Q6ZSZ5 1173 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 SNX20Q7Z614 316 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 CFAP206Q8IYR0 622 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 TC2NQ8N9U0 490 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 OR4K2Q8NGD2 314 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 HM13Q8TCT9 377 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 STARD8Q92502 1023 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 MRFAP1L1Q96HT8 127 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 C12orf66Q96MD2 445 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 SPATA13Q96N96 652 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 FICDQ9BVA6 458 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 HEMGNQ9BXL5 484 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 SEMA4CQ9C0C4 833 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 SLC7A5P2Q9GIP4 190 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 MVB12BQ9H7P6 319 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 UGT1A7Q9HAW7 530 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 UGT1A10Q9HAW8 530 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 UGT1A8Q9HAW9 530 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 ARNT2Q9HBZ2 717 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 LATS2Q9NRM7 1088 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 KCND1Q9NSA2 647 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 HRASLS2Q9NWW9 162 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 SIDT1Q9NXL6 827 aaKnown RBP7.6□□□□□ -1.19
CD44-211ENST00000442151 TRIM10Q9UDY6 481 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 LNPEPQ9UIQ6 1025 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 SERTAD3Q9UJW9 196 aa7.6□□□□□ -1.19
CD44-211ENST00000442151 MACROD2A1Z1Q3 448 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 PIPSLA2A3N6 862 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 OR5K3A6NET4 321 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 ERI2A8K979 691 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms