RNA–Protein interactions for RNA: ENST00000440539.1

AC253536.4-201, humanhuman

BASIC

Gene AC253536.4, Length 267 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC253536.4-201ENST00000440539 TRAM1L1Q8N609 369 aa13.41□□□□□ -0.26
AC253536.4-201ENST00000440539 PCDHB18PQ96TA0 734 aa13.41□□□□□ -0.26
AC253536.4-201ENST00000440539 TREX2Q9BQ50 279 aaPredicted RBP13.41□□□□□ -0.26
AC253536.4-201ENST00000440539 NUP85Q9BW27 656 aa13.41□□□□□ -0.26
AC253536.4-201ENST00000440539 NDST4Q9H3R1 872 aa13.41□□□□□ -0.26
AC253536.4-201ENST00000440539 NT5MQ9NPB1 228 aa13.41□□□□□ -0.26
AC253536.4-201ENST00000440539 CWC15Q9P013 229 aaKnown RBP13.41□□□□□ -0.26
AC253536.4-201ENST00000440539 NFKBIL1Q9UBC1 381 aaPredicted RBP13.41□□□□□ -0.26
AC253536.4-201ENST00000440539 GPN3Q9UHW5 284 aaPredicted RBP13.41□□□□□ -0.26
AC253536.4-201ENST00000440539 PRRC2AP48634 2157 aaKnown RBP13.4□□□□□ -0.26
AC253536.4-201ENST00000440539 CCDC66A2RUB6 948 aa13.4□□□□□ -0.26
AC253536.4-201ENST00000440539 UMODP07911 640 aa13.4□□□□□ -0.26
AC253536.4-201ENST00000440539 CA4P22748 312 aa13.4□□□□□ -0.26
AC253536.4-201ENST00000440539 PREPP48147 710 aa13.4□□□□□ -0.26
AC253536.4-201ENST00000440539 OGDHQ02218 1023 aa13.4□□□□□ -0.26
AC253536.4-201ENST00000440539 PPP6R3Q5H9R7 873 aaPredicted RBP13.4□□□□□ -0.26
AC253536.4-201ENST00000440539 MRPL14Q6P1L8 145 aaKnown RBP13.4□□□□□ -0.26
AC253536.4-201ENST00000440539 FBXO38Q6PIJ6 1188 aa13.4□□□□□ -0.26
AC253536.4-201ENST00000440539 MON1BQ7L1V2 547 aa13.4□□□□□ -0.26
AC253536.4-201ENST00000440539 ATPAF2Q8N5M1 289 aa13.4□□□□□ -0.26
AC253536.4-201ENST00000440539 PPM1MQ96MI6 270 aa13.4□□□□□ -0.26
AC253536.4-201ENST00000440539 TAAR6Q96RI8 345 aa13.4□□□□□ -0.26
AC253536.4-201ENST00000440539 LMF1Q96S06 567 aa13.4□□□□□ -0.26
AC253536.4-201ENST00000440539 CXXC4Q9H2H0 198 aa13.4□□□□□ -0.26
AC253536.4-201ENST00000440539 PCDH9Q9HC56 1237 aa13.4□□□□□ -0.26
AC253536.4-201ENST00000440539 SLC6A20Q9NP91 592 aa13.4□□□□□ -0.26
AC253536.4-201ENST00000440539 RAD18Q9NS91 495 aa13.4□□□□□ -0.26
AC253536.4-201ENST00000440539 POMT2Q9UKY4 750 aa13.4□□□□□ -0.26
AC253536.4-201ENST00000440539 OR6C74A6NCV1 312 aa13.39□□□□□ -0.27
AC253536.4-201ENST00000440539 BIN1O00499 593 aa13.39□□□□□ -0.27
AC253536.4-201ENST00000440539 PRPSAP2O60256 369 aa13.39□□□□□ -0.27
AC253536.4-201ENST00000440539 GFPT2O94808 682 aa13.39□□□□□ -0.27
AC253536.4-201ENST00000440539 UNC5CO95185 931 aa13.39□□□□□ -0.27
AC253536.4-201ENST00000440539 CBSLP0DN79 551 aa13.39□□□□□ -0.27
AC253536.4-201ENST00000440539 CDH3P22223 829 aa13.39□□□□□ -0.27
AC253536.4-201ENST00000440539 CBSP35520 551 aa13.39□□□□□ -0.27
AC253536.4-201ENST00000440539 ITKQ08881 620 aa13.39□□□□□ -0.27
AC253536.4-201ENST00000440539 CLEC16AQ2KHT3 1053 aa13.39□□□□□ -0.27
AC253536.4-201ENST00000440539 VWA3BQ502W6 1294 aa13.39□□□□□ -0.27
AC253536.4-201ENST00000440539 PLEKHA7Q6IQ23 1121 aa13.39□□□□□ -0.27
AC253536.4-201ENST00000440539 RHBDD2Q6NTF9 364 aa13.39□□□□□ -0.27
AC253536.4-201ENST00000440539 DCUN1D2Q6PH85 259 aa13.39□□□□□ -0.27
AC253536.4-201ENST00000440539 GPR26Q8NDV2 337 aa13.39□□□□□ -0.27
AC253536.4-201ENST00000440539 CHDHQ8NE62 594 aaPredicted RBP13.39□□□□□ -0.27
AC253536.4-201ENST00000440539 CATSPER1Q8NEC5 780 aa13.39□□□□□ -0.27
AC253536.4-201ENST00000440539 LPCAT1Q8NF37 534 aa13.39□□□□□ -0.27
AC253536.4-201ENST00000440539 ANKRD20A12PQ8NF67 263 aa13.39□□□□□ -0.27
AC253536.4-201ENST00000440539 OR1N1Q8NGS0 311 aa13.39□□□□□ -0.27
AC253536.4-201ENST00000440539 PROKR1Q8TCW9 393 aa13.39□□□□□ -0.27
AC253536.4-201ENST00000440539 EID2BQ96D98 161 aa13.39□□□□□ -0.27
AC253536.4-201ENST00000440539 PEBP4Q96S96 227 aa13.39□□□□□ -0.27
AC253536.4-201ENST00000440539 LHPPQ9H008 270 aa13.39□□□□□ -0.27
AC253536.4-201ENST00000440539 ZWILCHQ9H900 591 aa13.39□□□□□ -0.27
AC253536.4-201ENST00000440539 NDOR1Q9UHB4 597 aa13.39□□□□□ -0.27
AC253536.4-201ENST00000440539 AP1M2Q9Y6Q5 423 aa13.39□□□□□ -0.27
AC253536.4-201ENST00000440539 GOLGA6L4A6NEF3 574 aa13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 ANKRD66B4E2M5 251 aa13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 MATN2O00339 956 aa13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 DDX3YO15523 660 aaKnown RBP13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 ATMINO43313 823 aaPredicted RBP13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 MAP3K7O43318 606 aa13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 CNOT3O75175 753 aaKnown RBP13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 MTX2O75431 263 aa13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 MTHFD1P11586 935 aaKnown RBP13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 MMP11P24347 488 aa13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 CASP6P55212 293 aa13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 DCDP81605 110 aaKnown RBP13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 RBPJQ06330 500 aa13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 MFAP5Q13361 173 aa13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 CDSNQ15517 529 aa13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 QPCTQ16769 361 aa13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 KHDC1Q4VXA5 237 aaKnown RBP13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 TMCO3Q6UWJ1 677 aa13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 ISLR2Q6UXK2 745 aa13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 CYP4V2Q6ZWL3 525 aaPredicted RBP13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 AMZ2Q86W34 360 aa13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 TRAPPC5Q8IUR0 188 aa13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 LRRC49Q8IUZ0 686 aa13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 MAGEB10Q96LZ2 347 aaPredicted RBP13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 VPS35Q96QK1 796 aa13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 FOXC2Q99958 501 aa13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 AP1M1Q9BXS5 423 aa13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 ZFYVE1Q9HBF4 777 aa13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 ETNK2Q9NVF9 386 aa13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 ABI3Q9P2A4 366 aa13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 IFT80Q9P2H3 777 aaPredicted RBP13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 PCSK1NQ9UHG2 260 aa13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 AMACRQ9UHK6 382 aa13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 SLC24A2Q9UI40 661 aa13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 FBXL4Q9UKA2 621 aa13.38□□□□□ -0.27
AC253536.4-201ENST00000440539 VPS13CQ709C8 3753 aa13.37□□□□□ -0.27
AC253536.4-201ENST00000440539 FOSL1P15407 271 aa13.37□□□□□ -0.27
AC253536.4-201ENST00000440539 KLK2P20151 261 aa13.37□□□□□ -0.27
AC253536.4-201ENST00000440539 CSNK1G2P78368 415 aa13.37□□□□□ -0.27
AC253536.4-201ENST00000440539 DSC2Q02487 901 aa13.37□□□□□ -0.27
AC253536.4-201ENST00000440539 TMEM115Q12893 351 aaPredicted RBP13.37□□□□□ -0.27
AC253536.4-201ENST00000440539 PRKAA1Q13131 559 aa13.37□□□□□ -0.27
AC253536.4-201ENST00000440539 GALNT3Q14435 633 aa13.37□□□□□ -0.27
AC253536.4-201ENST00000440539 LONRF1Q17RB8 773 aa13.37□□□□□ -0.27
AC253536.4-201ENST00000440539 ZFYVE27Q5T4F4 411 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms