RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 TUBB2AQ13885 445 aa20.25■□□□□ 0.83
CPNE1-219ENST00000440240 PRPSAP1Q14558 356 aa20.25■□□□□ 0.83
CPNE1-219ENST00000440240 GSE1Q14687 1217 aa20.25■□□□□ 0.83
CPNE1-219ENST00000440240 DAAM2Q86T65 1068 aa20.25■□□□□ 0.83
CPNE1-219ENST00000440240 APLFQ8IW19 511 aaPredicted RBP20.25■□□□□ 0.83
CPNE1-219ENST00000440240 CCDC170Q8IYT3 715 aa20.25■□□□□ 0.83
CPNE1-219ENST00000440240 D2HGDHQ8N465 521 aa20.25■□□□□ 0.83
CPNE1-219ENST00000440240 RNF214Q8ND24 703 aa20.25■□□□□ 0.83
CPNE1-219ENST00000440240 OR4K2Q8NGD2 314 aa20.25■□□□□ 0.83
CPNE1-219ENST00000440240 OR8K5Q8NH50 307 aa20.25■□□□□ 0.83
CPNE1-219ENST00000440240 DCUN1D1Q96GG9 259 aa20.25■□□□□ 0.83
CPNE1-219ENST00000440240 LINC00615Q96LM1 132 aaPredicted RBP20.25■□□□□ 0.83
CPNE1-219ENST00000440240 TUBB2BQ9BVA1 445 aa20.25■□□□□ 0.83
CPNE1-219ENST00000440240 KIR3DX1Q9H7L2 352 aa20.25■□□□□ 0.83
CPNE1-219ENST00000440240 SLC24A2Q9UI40 661 aa20.25■□□□□ 0.83
CPNE1-219ENST00000440240 EFR3BQ9Y2G0 817 aa20.25■□□□□ 0.83
CPNE1-219ENST00000440240 STK10O94804 968 aaKnown RBP20.24■□□□□ 0.83
CPNE1-219ENST00000440240 ZBTB11O95625 1053 aaPredicted RBP20.24■□□□□ 0.83
CPNE1-219ENST00000440240 EBLN1P0CF75 366 aa20.24■□□□□ 0.83
CPNE1-219ENST00000440240 MARCKSL1P49006 195 aa20.24■□□□□ 0.83
CPNE1-219ENST00000440240 PMS2P54278 862 aa20.24■□□□□ 0.83
CPNE1-219ENST00000440240 UBAP2LQ14157 1087 aaKnown RBP20.24■□□□□ 0.83
CPNE1-219ENST00000440240 KRT33BQ14525 404 aa20.24■□□□□ 0.83
CPNE1-219ENST00000440240 BCL7AQ4VC05 210 aa20.24■□□□□ 0.83
CPNE1-219ENST00000440240 TMTC4Q5T4D3 741 aa20.24■□□□□ 0.83
CPNE1-219ENST00000440240 TC2NQ8N9U0 490 aa20.24■□□□□ 0.83
CPNE1-219ENST00000440240 THAP4Q8WY91 577 aa20.24■□□□□ 0.83
CPNE1-219ENST00000440240 KRT35Q92764 455 aa20.24■□□□□ 0.83
CPNE1-219ENST00000440240 CALR3Q96L12 384 aaKnown RBP20.24■□□□□ 0.83
CPNE1-219ENST00000440240 C19orf43Q9BQ61 176 aa20.24■□□□□ 0.83
CPNE1-219ENST00000440240 CCM2Q9BSQ5 444 aa20.24■□□□□ 0.83
CPNE1-219ENST00000440240 ACTL8Q9H568 366 aa20.24■□□□□ 0.83
CPNE1-219ENST00000440240 KCND1Q9NSA2 647 aa20.24■□□□□ 0.83
CPNE1-219ENST00000440240 TLK1Q9UKI8 766 aa20.24■□□□□ 0.83
CPNE1-219ENST00000440240 MAN2B2Q9Y2E5 1009 aa20.24■□□□□ 0.83
CPNE1-219ENST00000440240 HEBP2Q9Y5Z4 205 aa20.24■□□□□ 0.83
CPNE1-219ENST00000440240 ZNF106Q9H2Y7 1883 aaKnown RBP20.24■□□□□ 0.83
CPNE1-219ENST00000440240 DOPEY2Q9Y3R5 2298 aa20.23■□□□□ 0.83
CPNE1-219ENST00000440240 OR6C74A6NCV1 312 aa20.23■□□□□ 0.83
CPNE1-219ENST00000440240 CYSRT1A8MQ03 144 aa20.23■□□□□ 0.83
CPNE1-219ENST00000440240 AGAP14A8MT82 685 aa20.23■□□□□ 0.83
CPNE1-219ENST00000440240 NDUFS1P28331 727 aa20.23■□□□□ 0.83
CPNE1-219ENST00000440240 ADRA1AP35348 466 aa20.23■□□□□ 0.83
CPNE1-219ENST00000440240 ASB18Q6ZVZ8 466 aa20.23■□□□□ 0.83
CPNE1-219ENST00000440240 TMEM135Q86UB9 458 aa20.23■□□□□ 0.83
CPNE1-219ENST00000440240 CFAP206Q8IYR0 622 aa20.23■□□□□ 0.83
CPNE1-219ENST00000440240 SPDYE1Q8NFV5 336 aaPredicted RBP20.23■□□□□ 0.83
CPNE1-219ENST00000440240 HEXDCQ8WVB3 486 aa20.23■□□□□ 0.83
CPNE1-219ENST00000440240 ULK4Q96C45 1275 aa20.23■□□□□ 0.83
CPNE1-219ENST00000440240 LRRC45Q96CN5 670 aa20.23■□□□□ 0.83
CPNE1-219ENST00000440240 PPP1R2P1Q96PQ5 205 aa20.23■□□□□ 0.83
CPNE1-219ENST00000440240 C10orf88Q9H8K7 445 aa20.23■□□□□ 0.83
CPNE1-219ENST00000440240 FKBPLQ9UIM3 349 aa20.23■□□□□ 0.83
CPNE1-219ENST00000440240 PCDHA3Q9Y5H8 950 aa20.23■□□□□ 0.83
CPNE1-219ENST00000440240 RP1L1Q8IWN7 2480 aaPredicted RBP20.22■□□□□ 0.83
CPNE1-219ENST00000440240 RELNP78509 3460 aa20.22■□□□□ 0.83
CPNE1-219ENST00000440240 C17orf113A0A1B0GUU1 675 aa20.22■□□□□ 0.83
CPNE1-219ENST00000440240 CPNE3O75131 537 aaKnown RBP20.22■□□□□ 0.83
CPNE1-219ENST00000440240 SCRG1O75711 98 aa20.22■□□□□ 0.83
CPNE1-219ENST00000440240 POLBP06746 335 aa20.22■□□□□ 0.83
CPNE1-219ENST00000440240 CTNNA2P26232 953 aa20.22■□□□□ 0.83
CPNE1-219ENST00000440240 PTPN4P29074 926 aa20.22■□□□□ 0.83
CPNE1-219ENST00000440240 CYLC1P35663 651 aaPredicted RBP20.22■□□□□ 0.83
CPNE1-219ENST00000440240 HADHAP40939 763 aa20.22■□□□□ 0.83
CPNE1-219ENST00000440240 XIAPP98170 497 aa20.22■□□□□ 0.83
CPNE1-219ENST00000440240 PRKAA1Q13131 559 aa20.22■□□□□ 0.83
CPNE1-219ENST00000440240 SEMA5AQ13591 1074 aa20.22■□□□□ 0.83
CPNE1-219ENST00000440240 UGT8Q16880 541 aa20.22■□□□□ 0.83
CPNE1-219ENST00000440240 ANKRD20A2Q5SQ80 823 aa20.22■□□□□ 0.83
CPNE1-219ENST00000440240 ANKRD20A1Q5TYW2 823 aa20.22■□□□□ 0.83
CPNE1-219ENST00000440240 ANKRD20A3Q5VUR7 823 aa20.22■□□□□ 0.83
CPNE1-219ENST00000440240 CAPRIN2Q6IMN6 1127 aaKnown RBP20.22■□□□□ 0.83
CPNE1-219ENST00000440240 FAM199XQ6PEV8 388 aaPredicted RBP20.22■□□□□ 0.83
CPNE1-219ENST00000440240 CERS6Q6ZMG9 384 aa20.22■□□□□ 0.83
CPNE1-219ENST00000440240 CDKL3Q8IVW4 592 aaPredicted RBP20.22■□□□□ 0.83
CPNE1-219ENST00000440240 ACTL9Q8TC94 416 aa20.22■□□□□ 0.83
CPNE1-219ENST00000440240 GORASP1Q9BQQ3 440 aa20.22■□□□□ 0.83
CPNE1-219ENST00000440240 AKIRIN1Q9H9L7 192 aaPredicted RBP20.22■□□□□ 0.83
CPNE1-219ENST00000440240 FAM8A1Q9UBU6 413 aa20.22■□□□□ 0.83
CPNE1-219ENST00000440240 CRLS1Q9UJA2 301 aa20.22■□□□□ 0.83
CPNE1-219ENST00000440240 FARSAQ9Y285 508 aaKnown RBP20.22■□□□□ 0.83
CPNE1-219ENST00000440240 CFAP99D6REC4 459 aa20.21■□□□□ 0.83
CPNE1-219ENST00000440240 K7EM74 188 aa20.21■□□□□ 0.83
CPNE1-219ENST00000440240 MATN2O00339 956 aa20.21■□□□□ 0.83
CPNE1-219ENST00000440240 ZNF189O75820 626 aaPredicted RBP20.21■□□□□ 0.83
CPNE1-219ENST00000440240 KLK3P07288 261 aaPredicted RBP20.21■□□□□ 0.83
CPNE1-219ENST00000440240 RBP3P10745 1247 aa20.21■□□□□ 0.83
CPNE1-219ENST00000440240 CTNNA1P35221 906 aaKnown RBP20.21■□□□□ 0.83
CPNE1-219ENST00000440240 CETN2P41208 172 aa20.21■□□□□ 0.83
CPNE1-219ENST00000440240 EIF3EP60228 445 aaKnown RBP20.21■□□□□ 0.83
CPNE1-219ENST00000440240 OTUD4Q01804 1114 aaKnown RBP20.21■□□□□ 0.83
CPNE1-219ENST00000440240 SRSF1Q07955 248 aaKnown RBP eCLIP20.21■□□□□ 0.83
CPNE1-219ENST00000440240 DUS1LQ6P1R4 473 aaKnown RBP20.21■□□□□ 0.83
CPNE1-219ENST00000440240 SYVN1Q86TM6 617 aa20.21■□□□□ 0.83
CPNE1-219ENST00000440240 TMEM126BQ8IUX1 230 aa20.21■□□□□ 0.83
CPNE1-219ENST00000440240 ZNF501Q96CX3 271 aaPredicted RBP20.21■□□□□ 0.83
CPNE1-219ENST00000440240 COPS8Q99627 209 aa20.21■□□□□ 0.83
CPNE1-219ENST00000440240 APOL2Q9BQE5 337 aa20.21■□□□□ 0.83
CPNE1-219ENST00000440240 OSBPL8Q9BZF1 889 aa20.21■□□□□ 0.83
CPNE1-219ENST00000440240 TRIM5Q9C035 493 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms