RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 HTR6P50406 440 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 ALDH3A2P51648 485 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 ARSFP54793 590 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 OXCT1P55809 520 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 C16orf72Q14CZ0 275 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 PLCL1Q15111 1095 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 TGFBIQ15582 683 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 RTP2Q5QGT7 225 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 TMEM214Q6NUQ4 689 aaKnown RBP16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 DUS1LQ6P1R4 473 aaKnown RBP16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 RALGPS2Q86X27 583 aaPredicted RBP16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 DCBLD1Q8N8Z6 715 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 LPCAT1Q8NF37 534 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 ABTB1Q969K4 478 aaPredicted RBP16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 EXOC2Q96KP1 924 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 SPATA17Q96L03 361 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 CDK15Q96Q40 435 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 CGREF1Q99674 301 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 RETREG1Q9H6L5 497 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 CWH43Q9H720 699 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 SCUBE2Q9NQ36 999 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 TBCCD1Q9NVR7 557 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 IFRD1O00458 451 aaPredicted RBP16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 ACSL4O60488 711 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 DEAF1O75398 565 aaPredicted RBP16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 ANXA6P08133 673 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 RAP2AP10114 183 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 JUNBP17275 347 aaPredicted RBP16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 GGT1P19440 569 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 EN2P19622 333 aaPredicted RBP16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 CDH4P55283 916 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 ELAVL2Q12926 359 aaKnown RBP16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 DAG1Q14118 895 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 CBX2Q14781 532 aaPredicted RBP16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 CYP20A1Q6UW02 462 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 OR13F1Q8NGS4 319 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 TBC1D15Q8TC07 691 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 PPM1MQ96MI6 270 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 CCDC115Q96NT0 180 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 NAA50Q9GZZ1 169 aaKnown RBP16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 CRISPLD1Q9H336 500 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 FAIMQ9NVQ4 179 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 COMMD8Q9NX08 183 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 SLC27A5Q9Y2P5 690 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 COMMD10Q9Y6G5 202 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 ZFP37Q9Y6Q3 630 aaPredicted RBP16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 MTMR11A4FU01 709 aa16.14■□□□□ 0.17
CLCNKA-203ENST00000439316 LSM1O15116 133 aaKnown RBP16.14■□□□□ 0.17
CLCNKA-203ENST00000439316 VNN2O95498 520 aa16.14■□□□□ 0.17
CLCNKA-203ENST00000439316 F11P03951 625 aa16.14■□□□□ 0.17
CLCNKA-203ENST00000439316 ALPLP05186 524 aa16.14■□□□□ 0.17
CLCNKA-203ENST00000439316 CAPN1P07384 714 aa16.14■□□□□ 0.17
CLCNKA-203ENST00000439316 G6PDP11413 515 aa16.14■□□□□ 0.17
CLCNKA-203ENST00000439316 JAK1P23458 1154 aa16.14■□□□□ 0.17
CLCNKA-203ENST00000439316 SHMT2P34897 504 aa16.14■□□□□ 0.17
CLCNKA-203ENST00000439316 ARPP19P56211 112 aa16.14■□□□□ 0.17
CLCNKA-203ENST00000439316 MTPNP58546 118 aa16.14■□□□□ 0.17
CLCNKA-203ENST00000439316 WDR5P61964 334 aaKnown RBP16.14■□□□□ 0.17
CLCNKA-203ENST00000439316 PWP1Q13610 501 aa16.14■□□□□ 0.17
CLCNKA-203ENST00000439316 PCBP2Q15366 365 aaKnown RBP eCLIP16.14■□□□□ 0.17
CLCNKA-203ENST00000439316 NEDD8Q15843 81 aa16.14■□□□□ 0.17
CLCNKA-203ENST00000439316 FGD3Q5JSP0 725 aa16.14■□□□□ 0.17
CLCNKA-203ENST00000439316 OTUD3Q5T2D3 398 aaPredicted RBP16.14■□□□□ 0.17
CLCNKA-203ENST00000439316 RSPO2Q6UXX9 243 aaPredicted RBP16.14■□□□□ 0.17
CLCNKA-203ENST00000439316 OR8J3Q8NGG0 315 aa16.14■□□□□ 0.17
CLCNKA-203ENST00000439316 TMBIM1Q969X1 311 aa16.14■□□□□ 0.17
CLCNKA-203ENST00000439316 THAP11Q96EK4 314 aa16.14■□□□□ 0.17
CLCNKA-203ENST00000439316 MUS81Q96NY9 551 aa16.14■□□□□ 0.17
CLCNKA-203ENST00000439316 SPON2Q9BUD6 331 aa16.14■□□□□ 0.17
CLCNKA-203ENST00000439316 AGO1Q9UL18 857 aaKnown RBP16.14■□□□□ 0.17
CLCNKA-203ENST00000439316 H7C0S8 307 aa16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 HPRP00739 348 aa16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 ESR1P03372 595 aa16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 INHBBP09529 407 aa16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 THRBP10828 461 aa16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 POLR2IP36954 125 aaKnown RBP16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 CLCN7P51798 805 aa16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 FAM98BQ52LJ0 330 aaKnown RBP16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 SPOUT1Q5T280 376 aaKnown RBP16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 IL27RAQ6UWB1 636 aa16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 CHST15Q7LFX5 561 aaPredicted RBP16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 OTOP2Q7RTS6 562 aa16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 GOLGA7Q7Z5G4 137 aa16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 TTC30BQ8N4P2 665 aa16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 SMYD1Q8NB12 490 aa16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 ITFG1Q8TB96 612 aa16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 METTL6Q8TCB7 284 aa16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 MIPOL1Q8TD10 442 aa16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 SEPT5Q99719 369 aaPredicted RBP16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 TTPALQ9BTX7 342 aa16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 RAI2Q9Y5P3 530 aa16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 E5RI56 91 aa16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 OR7A17O14581 309 aa16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 MBL2P11226 248 aaPredicted RBP16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 TCF3P15923 654 aa16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 CD247P20963 164 aa16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 ELK4P28324 431 aa16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 PTGER3P43115 390 aa16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 KIAA0040Q15053 153 aa16.13■□□□□ 0.17
CLCNKA-203ENST00000439316 ZRANB3Q5FWF4 1079 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms