RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 WASH4PA8MWX3 477 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 FFAR2O15552 330 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 NTRK1P04629 796 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 UROSP10746 265 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 GJA8P48165 433 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 NRG1Q02297 640 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 ITGADQ13349 1161 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 GTF2H2Q13888 395 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 PLA2G4EQ3MJ16 856 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 C6orf52Q5T4I8 152 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 GTF2H2CQ6P1K8 395 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 APLFQ8IW19 511 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 TXNDC5Q8NBS9 432 aaKnown RBP11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 ZNF555Q8NEP9 628 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 CLHC1Q8NHS4 586 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 PEX13Q92968 403 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 DNAJC11Q9NVH1 559 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 MKS1Q9NXB0 559 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 ZDHHC3Q9NYG2 299 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 GALPQ9UBC7 116 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 B4GALT6Q9UBX8 382 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 OGDHLQ9ULD0 1010 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 CLOCKO15516 846 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 KERAO60938 352 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 LRATO95237 230 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 S1PR4O95977 384 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 GNPDA1P46926 289 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 PGFP49763 221 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 EIF2B2P49770 351 aaKnown RBP11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 CCR3P51677 355 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 CHN2P52757 468 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 RPL26P61254 145 aaKnown RBP11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 DGCR6Q14129 220 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 VPS26BQ4G0F5 336 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 ZNF534Q76KX8 674 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 TMEM25Q86YD3 366 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 TMEM132CQ8N3T6 1108 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 ARL10Q8N8L6 244 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 RMND5BQ96G75 393 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 TRIM45Q9H8W5 580 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 PLAC1Q9HBJ0 212 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 HCFC1R1Q9NWW0 138 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 FBXO10Q9UK96 956 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 GPSM3Q9Y4H4 160 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 MYOCOSA0A1B0GUC4 107 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 LCHNA4D1U4 455 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 DRGXA6NNA5 263 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 AURKAO14965 403 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 OR1I1O60431 355 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 ZBTB11O95625 1053 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 FOSL2P15408 326 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 CD1EP15812 388 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 CDH2P19022 906 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 ADSLP30566 484 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 HSPA13P48723 471 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 VAC14Q08AM6 782 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 DMPKQ09013 629 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 DMC1Q14565 340 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 PDGFRLQ15198 375 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 GSTA3Q16772 222 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 FAM98BQ52LJ0 330 aaKnown RBP11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 CCDC92Q53HC0 331 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 KDELC1Q6UW63 502 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 MMAAQ8IVH4 418 aaKnown RBP11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 FBXW8Q8N3Y1 598 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 OR14C36Q8NHC7 312 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 DLG3Q92796 817 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 NR1H4Q96RI1 486 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 RIOK2Q9BVS4 552 aaKnown RBP11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 SYNDIG1Q9H7V2 258 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 PADI4Q9UM07 663 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 AP4S1Q9Y587 144 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 PCDHGB5Q9Y5G0 923 aa11.4□□□□□ -0.58
TRAPPC9-202ENST00000438773 B4GALT3O60512 393 aa11.4□□□□□ -0.59
TRAPPC9-202ENST00000438773 KCNH1O95259 989 aa11.4□□□□□ -0.59
TRAPPC9-202ENST00000438773 LATS1O95835 1130 aa11.4□□□□□ -0.59
TRAPPC9-202ENST00000438773 ZNF37AP17032 561 aaPredicted RBP11.4□□□□□ -0.59
TRAPPC9-202ENST00000438773 HNF4AP41235 474 aa11.4□□□□□ -0.59
TRAPPC9-202ENST00000438773 TBC1D25Q3MII6 688 aa11.4□□□□□ -0.59
TRAPPC9-202ENST00000438773 LDLRAP1Q5SW96 308 aa11.4□□□□□ -0.59
TRAPPC9-202ENST00000438773 IL23RQ5VWK5 629 aa11.4□□□□□ -0.59
TRAPPC9-202ENST00000438773 SULT1C3Q6IMI6 304 aa11.4□□□□□ -0.59
TRAPPC9-202ENST00000438773 Q6ZVL8 140 aa11.4□□□□□ -0.59
TRAPPC9-202ENST00000438773 PLD3Q8IV08 490 aa11.4□□□□□ -0.59
TRAPPC9-202ENST00000438773 APOLD1Q96LR9 279 aa11.4□□□□□ -0.59
TRAPPC9-202ENST00000438773 CRISPLD1Q9H336 500 aa11.4□□□□□ -0.59
TRAPPC9-202ENST00000438773 CDH22Q9UJ99 828 aa11.4□□□□□ -0.59
TRAPPC9-202ENST00000438773 SNX8Q9Y5X2 465 aa11.4□□□□□ -0.59
TRAPPC9-202ENST00000438773 AP4B1Q9Y6B7 739 aa11.4□□□□□ -0.59
TRAPPC9-202ENST00000438773 WNT9AO14904 365 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 SOCS5O75159 536 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 SLC26A3P40879 764 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 RPL34P49207 117 aaKnown RBP11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 RALGDSQ12967 914 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 C2orf27AQ580R0 203 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 RSPO2Q6UXX9 243 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 ATG14Q6ZNE5 492 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 C2orf73Q8N5S3 287 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 LZICQ8WZA0 190 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 SAMD11Q96NU1 681 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms