RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 HMGCS1Q01581 520 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 SPIBQ01892 262 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 ALDH6A1Q02252 535 aaKnown RBP6.59□□□□□ -1.35
CSDE1-205ENST00000438362 GALNT1Q10472 559 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-205ENST00000438362 PM20D1Q6GTS8 502 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 NANOGP8Q6NSW7 305 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 RANBP10Q6VN20 620 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 EIF3MQ7L2H7 374 aaKnown RBP6.59□□□□□ -1.35
CSDE1-205ENST00000438362 METTL3Q86U44 580 aaKnown RBP6.59□□□□□ -1.35
CSDE1-205ENST00000438362 TCAIMQ8N3R3 496 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 GPR156Q8NFN8 814 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 RHEBL1Q8TAI7 183 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 CAPSLQ8WWF8 208 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 PGAP3Q96FM1 320 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-205ENST00000438362 NSUN5Q96P11 429 aaKnown RBP6.59□□□□□ -1.35
CSDE1-205ENST00000438362 SLC29A1Q99808 456 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 TTPALQ9BTX7 342 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 ZDHHC6Q9H6R6 413 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 NANOGQ9H9S0 305 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 POPDC3Q9HBV1 291 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 GIMAP4Q9NUV9 329 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 DNAJC11Q9NVH1 559 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 SMOXQ9NWM0 555 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 CLN6Q9NWW5 311 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 DNAJC15Q9Y5T4 150 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 GMEB1Q9Y692 573 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 DNAJC25-GNG10A0A024R161 153 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 SOCS2O14508 198 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 FPGTO14772 594 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 GPR32O75388 356 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 ERN1O75460 977 aaKnown RBP6.59□□□□□ -1.35
CSDE1-205ENST00000438362 SNAP29O95721 258 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 G6PDP11413 515 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 ITPKAP23677 461 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 IL12AP29459 219 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 RPS24P62847 133 aaKnown RBP6.59□□□□□ -1.35
CSDE1-205ENST00000438362 OLR1P78380 273 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 ELP6Q0PNE2 266 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 TP53BP2Q13625 1128 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 ARHGAP15Q53QZ3 475 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 MS4A13Q5J8X5 152 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 C6orf136Q5SQH8 315 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 FBXL19Q6PCT2 694 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 CHST15Q7LFX5 561 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-205ENST00000438362 MAVSQ7Z434 540 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 ZC3H7AQ8IWR0 971 aaKnown RBP6.59□□□□□ -1.35
CSDE1-205ENST00000438362 UMODL1-AS1Q8N2C9 162 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 TMEM199Q8N511 208 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 TTC29Q8NA56 475 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-205ENST00000438362 SMYD1Q8NB12 490 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 SMG8Q8ND04 991 aaKnown RBP6.59□□□□□ -1.35
CSDE1-205ENST00000438362 C19orf18Q8NEA5 215 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 ACVR1CQ8NER5 493 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 DNAJB8Q8NHS0 232 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 NPLOC4Q8TAT6 608 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 HTRA1Q92743 480 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 CLP1Q92989 425 aaKnown RBP6.59□□□□□ -1.35
CSDE1-205ENST00000438362 TAMM41Q96BW9 452 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 BIRC8Q96P09 236 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 PRRG3Q9BZD7 231 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 TRIM8Q9BZR9 551 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 RPF2Q9H7B2 306 aaKnown RBP6.59□□□□□ -1.35
CSDE1-205ENST00000438362 KAT8Q9H7Z6 458 aaKnown RBP6.59□□□□□ -1.35
CSDE1-205ENST00000438362 TMEM165Q9HC07 324 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 TMEM248Q9NWD8 314 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 GIN1Q9NXP7 522 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 MARCH4Q9P2E8 410 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-205ENST00000438362 EVLQ9UI08 416 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-205ENST00000438362 VPS4AQ9UN37 437 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 KCNE2Q9Y6J6 123 aa6.59□□□□□ -1.35
CSDE1-205ENST00000438362 STRCP1A6NGW2 1772 aa6.59□□□□□ -1.36
CSDE1-205ENST00000438362 PRSS51A0A1B0GVH4 220 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 K7EPI3 171 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 AURKAO14965 403 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 SGTAO43765 313 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 RASAL1O95294 804 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 TRBC1P01850 177 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 PABPC1P11940 636 aaKnown RBP6.58□□□□□ -1.36
CSDE1-205ENST00000438362 COL6A1P12109 1028 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 HSD17B1P14061 328 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 ZNF182P17025 639 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-205ENST00000438362 RFC2P35250 354 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 SPAM1P38567 509 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 ARSDP51689 593 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 SERINC3Q13530 473 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 TUBA3CQ13748 450 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 RAB39AQ14964 217 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 ATP6AP1Q15904 470 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 PDCD4Q53EL6 469 aaKnown RBP6.58□□□□□ -1.36
CSDE1-205ENST00000438362 ALFQ53S48 1182 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 CPTPQ5TA50 214 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 ANXA8L1Q5VT79 327 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 SH2D5Q6ZV89 423 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 PIK3C3Q8NEB9 887 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 FNDC8Q8TC99 324 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 CSGALNACT1Q8TDX6 532 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 EEF1AKMT1Q8WVE0 214 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 BRI3BPQ8WY22 251 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 KHSRPQ92945 711 aaKnown RBP eCLIP6.58□□□□□ -1.363e-7■■■■□ 20
CSDE1-205ENST00000438362 PEX13Q92968 403 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms