RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 PPP1R13LQ8WUF5 828 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 VAT1Q99536 393 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 NT5C1AQ9BXI3 368 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 ACTR8Q9H981 624 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 CASS4Q9NQ75 786 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 SETD4Q9NVD3 440 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 ADGRE2Q9UHX3 823 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 CRYL1Q9Y2S2 319 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 RWDD3Q9Y3V2 267 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 A0A1W2PP18 115 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 LACTBL1A8MY62 500 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 CDK14O94921 469 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 ERCC2P18074 760 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 CHRNA4P43681 627 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 FCGRTP55899 365 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 CELF3Q5SZQ8 465 aaKnown RBP7.36□□□□□ -1.23
CPSF6-202ENST00000435070 FAM196AQ6ZSG2 479 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 DET1Q7L5Y6 550 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 DEFB106AQ8N104 65 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 ACOT13Q9NPJ3 140 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 ZNF302Q9NR11 478 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 POLG2Q9UHN1 485 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 ZNF639Q9UID6 485 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 OSGIN1Q9UJX0 560 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 RIPK3Q9Y572 518 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 FAM92AA1XBS5 289 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 HACD1B0YJ81 288 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 FAM72CH0Y354 149 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 EEF2KO00418 725 aaKnown RBP7.36□□□□□ -1.23
CPSF6-202ENST00000435070 AZIN1O14977 448 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 GABARAPL2P60520 117 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 IRF3Q14653 427 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 UGP2Q16851 508 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 FAM72AQ5TYM5 149 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 FAM72DQ6L9T8 149 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 PNCKQ6P2M8 343 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 C11orf88Q6PI97 169 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 FAM72BQ86X60 149 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 OR6P1Q8NGX9 317 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 FAM162AQ96A26 154 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 TBATAQ96M53 351 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 CDADC1Q9BWV3 514 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 EXOSC4Q9NPD3 245 aaKnown RBP7.36□□□□□ -1.23
CPSF6-202ENST00000435070 IGSF5Q9NSI5 407 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 COMMD8Q9NX08 183 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 AGO1Q9UL18 857 aaKnown RBP7.36□□□□□ -1.23
CPSF6-202ENST00000435070 GMPPBQ9Y5P6 360 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 ASPDHA6ND91 283 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 ASB14A6NK59 587 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 ERI2A8K979 691 aaKnown RBP7.36□□□□□ -1.23
CPSF6-202ENST00000435070 KPNA2P52292 529 aaKnown RBP7.36□□□□□ -1.23
CPSF6-202ENST00000435070 RABGGTBP53611 331 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 ENPEPQ07075 957 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 ACOX1Q15067 660 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 UNC50Q53HI1 259 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 ZMAT1Q5H9K5 638 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 OR6B3Q8NGW1 331 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 TRIM54Q9BYV2 358 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 TUBB1Q9H4B7 451 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 FEM1BQ9UK73 627 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 HSPB11Q9Y547 144 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 A0A0U1RQS6 177 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 I3L521 148 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 GAS2O43903 313 aaKnown RBP7.36□□□□□ -1.23
CPSF6-202ENST00000435070 MSCO60682 206 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 CYP11A1P05108 521 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 FHP07954 510 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 MSR1P21757 451 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 ATP6AP1LQ52LC2 224 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 YIF1BQ5BJH7 314 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 IRAK1BP1Q5VVH5 260 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 C2orf69Q8N8R5 385 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 OR10A6Q8NH74 314 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 SLA2Q9H6Q3 261 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.36□□□□□ -1.23
CPSF6-202ENST00000435070 CDH9Q9ULB4 789 aa7.36□□□□□ -1.23
CPSF6-202ENST00000435070 LTA4HP09960 611 aaKnown RBP7.35□□□□□ -1.23
CPSF6-202ENST00000435070 IL7P13232 177 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 POLR2CP19387 275 aaPredicted RBP7.35□□□□□ -1.23
CPSF6-202ENST00000435070 GRK5P34947 590 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 NUDT6P53370 316 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 FSCN1Q16658 493 aaKnown RBP7.35□□□□□ -1.23
CPSF6-202ENST00000435070 DUSP7Q16829 419 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 DCAF4L1Q3SXM0 396 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 ZC3H12BQ5HYM0 836 aaKnown RBP7.35□□□□□ -1.23
CPSF6-202ENST00000435070 NLRP8Q86W28 1048 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 RIMKLAQ8IXN7 391 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 YAF2Q8IY57 180 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 THEM5Q8N1Q8 247 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 CHAC2Q8WUX2 184 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 RBM4BQ9BQ04 359 aaKnown RBP7.35□□□□□ -1.23
CPSF6-202ENST00000435070 RBM4Q9BWF3 364 aaKnown RBP7.35□□□□□ -1.23
CPSF6-202ENST00000435070 PRR23D1E9PI22 279 aaPredicted RBP7.35□□□□□ -1.23
CPSF6-202ENST00000435070 ATP6V1G2-DDX39BF2Z307 99 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 DSCR3O14972 297 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 PRR23D2P0DMB1 279 aaPredicted RBP7.35□□□□□ -1.23
CPSF6-202ENST00000435070 SLC26A3P40879 764 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 CDH17Q12864 832 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 STARD3Q14849 445 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 BTBD16Q32M84 506 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms