RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 J3QRK9 145 aa15.33■□□□□ 0.05
SCARF1-203ENST00000434376 SEC22BO75396 215 aa15.33■□□□□ 0.05
SCARF1-203ENST00000434376 IST1P53990 364 aa15.33■□□□□ 0.05
SCARF1-203ENST00000434376 LAPTM5Q13571 262 aa15.33■□□□□ 0.05
SCARF1-203ENST00000434376 RETSATQ6NUM9 610 aa15.33■□□□□ 0.05
SCARF1-203ENST00000434376 TMEM150AQ86TG1 271 aa15.33■□□□□ 0.05
SCARF1-203ENST00000434376 SETD3Q86TU7 594 aaPredicted RBP15.33■□□□□ 0.05
SCARF1-203ENST00000434376 KRTCAP2Q8N6L1 136 aa15.33■□□□□ 0.05
SCARF1-203ENST00000434376 C12orf76Q8N812 135 aaPredicted RBP15.33■□□□□ 0.05
SCARF1-203ENST00000434376 FBXL8Q96CD0 374 aa15.33■□□□□ 0.05
SCARF1-203ENST00000434376 SPATA17Q96L03 361 aa15.33■□□□□ 0.05
SCARF1-203ENST00000434376 C2orf49Q9BVC5 232 aaPredicted RBP15.33■□□□□ 0.05
SCARF1-203ENST00000434376 PAPSS2O95340 614 aaPredicted RBP15.33■□□□□ 0.04
SCARF1-203ENST00000434376 SOD2P04179 222 aa15.33■□□□□ 0.04
SCARF1-203ENST00000434376 CYBBP04839 570 aa15.33■□□□□ 0.04
SCARF1-203ENST00000434376 GNAO1P09471 354 aa15.33■□□□□ 0.04
SCARF1-203ENST00000434376 ABRQ12979 859 aa15.33■□□□□ 0.04
SCARF1-203ENST00000434376 LAPTM4AQ15012 233 aa15.33■□□□□ 0.04
SCARF1-203ENST00000434376 ABRAXAS2Q15018 415 aa15.33■□□□□ 0.04
SCARF1-203ENST00000434376 GTDC1Q4AE62 458 aa15.33■□□□□ 0.04
SCARF1-203ENST00000434376 ATP6AP1LQ52LC2 224 aa15.33■□□□□ 0.04
SCARF1-203ENST00000434376 RFTN2Q52LD8 501 aaPredicted RBP15.33■□□□□ 0.04
SCARF1-203ENST00000434376 LRRC66Q68CR7 880 aa15.33■□□□□ 0.04
SCARF1-203ENST00000434376 OGFOD2Q6N063 350 aa15.33■□□□□ 0.04
SCARF1-203ENST00000434376 DPY19L3Q6ZPD9 716 aa15.33■□□□□ 0.04
SCARF1-203ENST00000434376 KIAA1191Q96A73 305 aa15.33■□□□□ 0.04
SCARF1-203ENST00000434376 KLF16Q9BXK1 252 aaPredicted RBP15.33■□□□□ 0.04
SCARF1-203ENST00000434376 RBM38Q9H0Z9 239 aaKnown RBP15.33■□□□□ 0.04
SCARF1-203ENST00000434376 ACTR8Q9H981 624 aa15.33■□□□□ 0.04
SCARF1-203ENST00000434376 MEAF6Q9HAF1 191 aa15.33■□□□□ 0.04
SCARF1-203ENST00000434376 SPG21Q9NZD8 308 aa15.33■□□□□ 0.04
SCARF1-203ENST00000434376 MAP10Q9P2G4 905 aa15.33■□□□□ 0.04
SCARF1-203ENST00000434376 PRPF19Q9UMS4 504 aaKnown RBP15.33■□□□□ 0.04
SCARF1-203ENST00000434376 SH3GLB1Q9Y371 365 aa15.33■□□□□ 0.04
SCARF1-203ENST00000434376 FAM92AA1XBS5 289 aa15.33■□□□□ 0.04
SCARF1-203ENST00000434376 PFDN6O15212 129 aa15.33■□□□□ 0.04
SCARF1-203ENST00000434376 KERAO60938 352 aa15.33■□□□□ 0.04
SCARF1-203ENST00000434376 XPAP23025 273 aaPredicted RBP15.33■□□□□ 0.04
SCARF1-203ENST00000434376 PHACTR4Q8IZ21 702 aa15.33■□□□□ 0.04
SCARF1-203ENST00000434376 CBR4Q8N4T8 237 aa15.33■□□□□ 0.04
SCARF1-203ENST00000434376 ZNF696Q9H7X3 374 aa15.33■□□□□ 0.04
SCARF1-203ENST00000434376 H6PDO95479 791 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 ZDHHC11BP0C7U3 371 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 BPIP17213 487 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 ITGALP20701 1170 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 LDLRAP1Q5SW96 308 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 TMEM214Q6NUQ4 689 aaKnown RBP15.32■□□□□ 0.04
SCARF1-203ENST00000434376 FAM180BQ6P0A1 224 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 SLC39A5Q6ZMH5 540 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 LILRA3Q8N6C8 439 aaPredicted RBP15.32■□□□□ 0.04
SCARF1-203ENST00000434376 GPR26Q8NDV2 337 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 DLG3Q92796 817 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 WRAP53Q9BUR4 548 aaKnown RBP15.32■□□□□ 0.04
SCARF1-203ENST00000434376 EBPLQ9BY08 206 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 LHX3Q9UBR4 397 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 INTS6Q9UL03 887 aaKnown RBP15.32■□□□□ 0.04
SCARF1-203ENST00000434376 ITM2BQ9Y287 266 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 GLYATL1P3A0A0U1RQE8 302 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 PABPN1LA6NDY0 278 aaKnown RBP15.32■□□□□ 0.04
SCARF1-203ENST00000434376 NR4A1P22736 598 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 CCR2P41597 374 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 EMP3P54852 163 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 DNAJB13P59910 316 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 LRP8Q14114 963 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 ATP13A5Q4VNC0 1218 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 ANGPTL8Q6UXH0 198 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 PARP8Q8N3A8 854 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 OR56A4Q8NGH8 313 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 MAGEE2Q8TD90 523 aaPredicted RBP15.32■□□□□ 0.04
SCARF1-203ENST00000434376 MED8Q96G25 268 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 SLC46A2Q9BY10 475 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 PRKAB1Q9Y478 270 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 LCHNA4D1U4 455 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 FFAR2O15552 330 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 TBC1D4O60343 1298 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 FGF18O76093 207 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 ZNF23P17027 643 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 ZNF7P17097 686 aaPredicted RBP15.32■□□□□ 0.04
SCARF1-203ENST00000434376 GSSP48637 474 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 MAPRE2Q15555 327 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 PGS1Q32NB8 556 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 UGT3A2Q3SY77 523 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 SLC15A3Q8IY34 581 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 HJURPQ8NCD3 748 aaPredicted RBP15.32■□□□□ 0.04
SCARF1-203ENST00000434376 FNDC8Q8TC99 324 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 KCTD14Q9BQ13 255 aaPredicted RBP15.32■□□□□ 0.04
SCARF1-203ENST00000434376 LTB4R2Q9NPC1 389 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 IL17CQ9P0M4 197 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 BLOC1S6Q9UL45 172 aa15.32■□□□□ 0.04
SCARF1-203ENST00000434376 DOCK4Q8N1I0 1966 aa15.31■□□□□ 0.04
SCARF1-203ENST00000434376 A0A1W2PPW3 197 aa15.31■□□□□ 0.04
SCARF1-203ENST00000434376 GPX3P22352 226 aa15.31■□□□□ 0.04
SCARF1-203ENST00000434376 HLA-FP30511 346 aa15.31■□□□□ 0.04
SCARF1-203ENST00000434376 HSPA13P48723 471 aa15.31■□□□□ 0.04
SCARF1-203ENST00000434376 CRY1Q16526 586 aa15.31■□□□□ 0.04
SCARF1-203ENST00000434376 Q6ZVL8 140 aa15.31■□□□□ 0.04
SCARF1-203ENST00000434376 PDZD8Q8NEN9 1154 aa15.31■□□□□ 0.04
SCARF1-203ENST00000434376 TCF25Q9BQ70 676 aa15.31■□□□□ 0.04
SCARF1-203ENST00000434376 EPB41L1Q9H4G0 881 aa15.31■□□□□ 0.04
SCARF1-203ENST00000434376 CMTM6Q9NX76 183 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms