RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 INTS6LQ5JSJ4 861 aaKnown RBP11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 C6orf136Q5SQH8 315 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 WSCD1Q658N2 575 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 LAIR1Q6GTX8 287 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 MILR1Q7Z6M3 343 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 DEPDC4Q8N2C3 294 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 PARP16Q8N5Y8 322 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 LRRC52Q8N7C0 313 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 GJD4Q96KN9 370 aaPredicted RBP11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 ZNF583Q96ND8 569 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 SLC2A13Q96QE2 648 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 TSPAN18Q96SJ8 248 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 TMEM209Q96SK2 561 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 SLC9A7Q96T83 725 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 BARD1Q99728 777 aaKnown RBP11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 SIP14410 1827 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 FAM234BA2RU67 622 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 FAM172BPA6NC97 362 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 TFECO14948 347 aaPredicted RBP11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 DNAJB5O75953 348 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 CCNCP24863 283 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 ZFP36L2P47974 494 aaKnown RBP11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 DAOAP59103 153 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 CYP4F2P78329 520 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 DAB2P98082 770 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 CYP4F3Q08477 520 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 FOXD4Q12950 439 aaPredicted RBP11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 NR6A1Q15406 480 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 ZNF181Q2M3W8 571 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 ATAD3CQ5T2N8 411 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 CES5AQ6NT32 575 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 ZCCHC8Q6NZY4 707 aaKnown RBP11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 NLGN4XQ8N0W4 816 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 NTAN1Q96AB6 310 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 BTBD2Q9BX70 525 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 NUAK2Q9H093 628 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 IRF2BPLQ9H1B7 796 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 ACOT13Q9NPJ3 140 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 PAQR5Q9NXK6 330 aaPredicted RBP11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 CDH9Q9ULB4 789 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 SNX6Q9UNH7 406 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 CDC7O00311 574 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 MAFKO60675 156 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 VPS4BO75351 444 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 RHOBTB1O94844 696 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 NTRK1P04629 796 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 HSMCR30P0CW71 290 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 SLC2A3P11169 496 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 GRIK1P39086 918 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 NEK5Q6P3R8 708 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 IL27RAQ6UWB1 636 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 DLEU7Q6UYE1 221 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 PAQR9Q6ZVX9 377 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 GALNT12Q8IXK2 581 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 SUN5Q8TC36 379 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 RDH12Q96NR8 316 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 ERVK13-1Q9NX77 482 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 SMPD4Q9NXE4 827 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 MATN3O15232 486 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 ZW10O43264 779 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 ZNF682O95780 498 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 CD4P01730 458 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 PRKCAP17252 672 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 NAT1P18440 290 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 ADRA1AP35348 466 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 HCAR3P49019 387 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 TAF6P49848 677 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 DEFA1P59665 94 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 DEFA3P59666 94 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 ERVK-8P63133 956 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 FAM187BQ17R55 369 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 SPATS1Q496A3 300 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 ZNF549Q6P9A3 640 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 PAQR3Q6TCH7 311 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 LACC1Q8IV20 430 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 BEX2Q9BXY8 128 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 OR2B2Q9GZK3 357 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 EHD3Q9NZN3 535 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 HACL1Q9UJ83 578 aa11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 EIF3LQ9Y262 564 aaKnown RBP11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 POLR3HQ9Y535 204 aaPredicted RBP11.38□□□□□ -0.59
HMGCS1-202ENST00000433297 SAGE2PA6NJ88 616 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 BTN3A1O00481 513 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 CXCR6O00574 342 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 RGS13O14921 159 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 MED26O95402 600 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 NDST3O95803 873 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 GLP2RO95838 553 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 SERPINA1P01009 418 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 RPL34P49207 117 aaKnown RBP11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 FCGRTP55899 365 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 PLEKHG6Q3KR16 790 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 RAP1GAP2Q684P5 730 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 TRAF7Q6Q0C0 670 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 SVOPLQ8N434 492 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 OR5K1Q8NHB7 308 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 SARS2Q9NP81 518 aaKnown RBP11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 QPCTLQ9NXS2 382 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 CPA4Q9UI42 421 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 WBP11Q9Y2W2 641 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms