RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 ITGA9Q13797 1035 aa13.9□□□□□ -0.18
SMARCE1-205ENST00000431889 KRT33BQ14525 404 aa13.9□□□□□ -0.18
SMARCE1-205ENST00000431889 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.9□□□□□ -0.18
SMARCE1-205ENST00000431889 HIST2H2BCQ6DN03 193 aa13.9□□□□□ -0.18
SMARCE1-205ENST00000431889 ASB18Q6ZVZ8 466 aa13.9□□□□□ -0.18
SMARCE1-205ENST00000431889 TMEM126BQ8IUX1 230 aa13.9□□□□□ -0.18
SMARCE1-205ENST00000431889 PHC3Q8NDX5 983 aa13.9□□□□□ -0.18
SMARCE1-205ENST00000431889 ACTL9Q8TC94 416 aa13.9□□□□□ -0.18
SMARCE1-205ENST00000431889 MR1Q95460 341 aa13.9□□□□□ -0.18
SMARCE1-205ENST00000431889 ZNF514Q96K75 400 aaPredicted RBP13.9□□□□□ -0.18
SMARCE1-205ENST00000431889 SRPK1Q96SB4 655 aaKnown RBP13.9□□□□□ -0.18
SMARCE1-205ENST00000431889 HACD3Q9P035 362 aa13.9□□□□□ -0.18
SMARCE1-205ENST00000431889 EPHA6Q9UF33 1036 aa13.9□□□□□ -0.18
SMARCE1-205ENST00000431889 SLC24A2Q9UI40 661 aa13.9□□□□□ -0.18
SMARCE1-205ENST00000431889 CRLS1Q9UJA2 301 aa13.9□□□□□ -0.18
SMARCE1-205ENST00000431889 INTUQ9ULD6 942 aa13.9□□□□□ -0.18
SMARCE1-205ENST00000431889 POLHQ9Y253 713 aa13.9□□□□□ -0.18
SMARCE1-205ENST00000431889 CCDC66A2RUB6 948 aa13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 SOWAHDA6NJG2 315 aa13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 ARGFXA6NJG6 315 aa13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 SLC9B1P1A6NJY1 282 aa13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 SCRG1O75711 98 aa13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 EPOP01588 193 aa13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 SLC35G4P0C7Q5 338 aa13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 PVRP15151 417 aa13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 TPH1P17752 444 aa13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 CCL11P51671 97 aa13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 NAP1L1P55209 391 aaKnown RBP13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 EIF3EP60228 445 aaKnown RBP13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 XIAPP98170 497 aa13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 GPS2Q13227 327 aa13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 TCEAL1Q15170 157 aa13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 TAF1AQ15573 450 aaPredicted RBP13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 LONRF2Q1L5Z9 754 aa13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 ANKRD20A2Q5SQ80 823 aa13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 ANKRD20A1Q5TYW2 823 aa13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 ANKRD20A3Q5VUR7 823 aa13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 NAPRTQ6XQN6 538 aa13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 BBS12Q6ZW61 710 aa13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 RBM12BQ8IXT5 1001 aaKnown RBP13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 TEX19Q8NA77 164 aa13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 RBM41Q96IZ5 413 aaKnown RBP13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 FERD3LQ96RJ6 166 aa13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 ANP32EQ9BTT0 268 aa13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 XKR8Q9H6D3 395 aa13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 ANAPC2Q9UJX6 822 aa13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 KCND3Q9UK17 655 aa13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 MED13Q9UHV7 2174 aa13.89□□□□□ -0.19
SMARCE1-205ENST00000431889 GSAPA4D1B5 854 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 MGAT4DA6NG13 374 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 MKRN2OSH3BPM6 223 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 UQCRFS1P47985 274 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 GEMP55040 296 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 KLRB1Q12918 225 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 ABRQ12979 859 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 PRKG2Q13237 762 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 UBAP2LQ14157 1087 aaKnown RBP13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 ARMC6Q6NXE6 501 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 DARS2Q6PI48 645 aaKnown RBP13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 OOSP2Q86WS3 158 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 OR2L2Q8NH16 312 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 UBXN4Q92575 508 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 VAT1Q99536 393 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 TRIM5Q9C035 493 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 RAB33BQ9H082 229 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 CHST8Q9H2A9 424 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 ANKMY1Q9P2S6 941 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 TRHDEQ9UKU6 1024 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 PTPN13Q12923 2485 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 PCSK5Q92824 1860 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 MAST4O15021 2626 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 TLCD2A6NGC4 264 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 C2orf81A6NN90 581 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 HACD1B0YJ81 288 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 APOC4-APOC2K7ER74 178 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 RFPL1O75677 317 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 APOC2P02655 101 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 RBP3P10745 1247 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 CDH3P22223 829 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 CTNNA2P26232 953 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 PDHA2P29803 388 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 ADRA1AP35348 466 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 PREPP48147 710 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 LMAN1P49257 510 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 FOXL2P58012 376 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 HSD11B2P80365 405 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 RAPSNQ13702 412 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 BRD3Q15059 726 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 NADK2Q4G0N4 442 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 ZRANB3Q5FWF4 1079 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 ZDHHC20Q5W0Z9 365 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 RANBP10Q6VN20 620 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 CLDN19Q8N6F1 224 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 ZNF501Q96CX3 271 aaPredicted RBP13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 DCUN1D1Q96GG9 259 aa13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 DNAJC1Q96KC8 554 aaKnown RBP13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 PACSIN2Q9UNF0 486 aaPredicted RBP13.88□□□□□ -0.19
SMARCE1-205ENST00000431889 CCDC88CQ9P219 2028 aa13.87□□□□□ -0.19
SMARCE1-205ENST00000431889 NBPF19A0A087WUL8 3843 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms