RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 TRIM13O60858 407 aa17.91■□□□□ 0.46
HMGN1-206ENST00000431390 H2AFYO75367 372 aaKnown RBP17.91■□□□□ 0.46
HMGN1-206ENST00000431390 VIMP08670 466 aaKnown RBP17.91■□□□□ 0.46
HMGN1-206ENST00000431390 HOXC4P09017 264 aaPredicted RBP17.91■□□□□ 0.46
HMGN1-206ENST00000431390 FGF3P11487 239 aaPredicted RBP17.91■□□□□ 0.46
HMGN1-206ENST00000431390 ZNF8P17098 575 aaPredicted RBP17.91■□□□□ 0.46
HMGN1-206ENST00000431390 SDHBP21912 280 aa17.91■□□□□ 0.46
HMGN1-206ENST00000431390 ATP5F1P24539 256 aaPredicted RBP17.91■□□□□ 0.46
HMGN1-206ENST00000431390 NUDT1P36639 197 aa17.91■□□□□ 0.46
HMGN1-206ENST00000431390 SEC24CP53992 1094 aa17.91■□□□□ 0.46
HMGN1-206ENST00000431390 ASPHQ12797 758 aa17.91■□□□□ 0.46
HMGN1-206ENST00000431390 OR4D1Q15615 310 aa17.91■□□□□ 0.46
HMGN1-206ENST00000431390 CHI3L2Q15782 390 aa17.91■□□□□ 0.46
HMGN1-206ENST00000431390 KIAA0895LQ68EN5 471 aa17.91■□□□□ 0.46
HMGN1-206ENST00000431390 NEK10Q6ZWH5 1172 aa17.91■□□□□ 0.46
HMGN1-206ENST00000431390 ELMO1Q92556 727 aa17.91■□□□□ 0.46
HMGN1-206ENST00000431390 FUBP1Q96AE4 644 aaKnown RBP17.91■□□□□ 0.46
HMGN1-206ENST00000431390 ATOH8Q96SQ7 321 aa17.91■□□□□ 0.46
HMGN1-206ENST00000431390 PARD6AQ9NPB6 346 aa17.91■□□□□ 0.46
HMGN1-206ENST00000431390 SPTBN2O15020 2390 aa17.91■□□□□ 0.46
HMGN1-206ENST00000431390 PLXND1Q9Y4D7 1925 aa17.9■□□□□ 0.46
HMGN1-206ENST00000431390 C17orf113A0A1B0GUU1 675 aa17.9■□□□□ 0.46
HMGN1-206ENST00000431390 SYCE1LA8MT33 242 aa17.9■□□□□ 0.46
HMGN1-206ENST00000431390 PRR5-ARHGAP8B1AHC4 643 aa17.9■□□□□ 0.46
HMGN1-206ENST00000431390 NUAK1O60285 661 aa17.9■□□□□ 0.46
HMGN1-206ENST00000431390 DLX3O60479 287 aa17.9■□□□□ 0.46
HMGN1-206ENST00000431390 GPC4O75487 556 aa17.9■□□□□ 0.46
HMGN1-206ENST00000431390 MPC1LP0DKB6 136 aa17.9■□□□□ 0.46
HMGN1-206ENST00000431390 TGM1P22735 817 aa17.9■□□□□ 0.46
HMGN1-206ENST00000431390 GRK2P25098 689 aa17.9■□□□□ 0.46
HMGN1-206ENST00000431390 ARHGAP8P85298 464 aa17.9■□□□□ 0.46
HMGN1-206ENST00000431390 TSNQ15631 228 aaKnown RBP17.9■□□□□ 0.46
HMGN1-206ENST00000431390 LIPMQ5VYY2 423 aa17.9■□□□□ 0.46
HMGN1-206ENST00000431390 PIWIL4Q7Z3Z4 852 aaKnown RBP17.9■□□□□ 0.46
HMGN1-206ENST00000431390 ADAMTSL2Q86TH1 951 aa17.9■□□□□ 0.46
HMGN1-206ENST00000431390 TRAPPC5Q8IUR0 188 aa17.9■□□□□ 0.46
HMGN1-206ENST00000431390 SLC22A9Q8IVM8 553 aa17.9■□□□□ 0.46
HMGN1-206ENST00000431390 BEND7Q8N7W2 519 aaPredicted RBP17.9■□□□□ 0.46
HMGN1-206ENST00000431390 PPP1R14CQ8TAE6 165 aa17.9■□□□□ 0.46
HMGN1-206ENST00000431390 FOXJ1Q92949 421 aa17.9■□□□□ 0.46
HMGN1-206ENST00000431390 APOOQ9BUR5 198 aa17.9■□□□□ 0.46
HMGN1-206ENST00000431390 LGR4Q9BXB1 951 aa17.9■□□□□ 0.46
HMGN1-206ENST00000431390 TPSD1Q9BZJ3 242 aa17.9■□□□□ 0.46
HMGN1-206ENST00000431390 FZD3Q9NPG1 666 aa17.9■□□□□ 0.46
HMGN1-206ENST00000431390 RNF112Q9ULX5 631 aa17.9■□□□□ 0.46
HMGN1-206ENST00000431390 OR1A2Q9Y585 309 aa17.9■□□□□ 0.46
HMGN1-206ENST00000431390 IGHV1OR15-9A0A0B4J2B8 117 aa17.89■□□□□ 0.45
HMGN1-206ENST00000431390 DCDC2BA2VCK2 349 aa17.89■□□□□ 0.45
HMGN1-206ENST00000431390 NPEPPSL1A6NEC2 478 aa17.89■□□□□ 0.45
HMGN1-206ENST00000431390 CDC7O00311 574 aa17.89■□□□□ 0.45
HMGN1-206ENST00000431390 FPGTO14772 594 aa17.89■□□□□ 0.45
HMGN1-206ENST00000431390 SMIM24O75264 130 aa17.89■□□□□ 0.45
HMGN1-206ENST00000431390 SLCO2B1O94956 709 aa17.89■□□□□ 0.45
HMGN1-206ENST00000431390 SERPINE1P05121 402 aa17.89■□□□□ 0.45
HMGN1-206ENST00000431390 TPBGLP0DKB5 382 aa17.89■□□□□ 0.45
HMGN1-206ENST00000431390 AKT2P31751 481 aa17.89■□□□□ 0.45
HMGN1-206ENST00000431390 CXCL12P48061 93 aa17.89■□□□□ 0.45
HMGN1-206ENST00000431390 KCNC1P48547 511 aa17.89■□□□□ 0.45
HMGN1-206ENST00000431390 CCR3P51677 355 aa17.89■□□□□ 0.45
HMGN1-206ENST00000431390 DNAJB13P59910 316 aa17.89■□□□□ 0.45
HMGN1-206ENST00000431390 NFKB2Q00653 900 aa17.89■□□□□ 0.45
HMGN1-206ENST00000431390 HSPA14Q0VDF9 509 aa17.89■□□□□ 0.45
HMGN1-206ENST00000431390 BOP1Q14137 746 aaKnown RBP17.89■□□□□ 0.45
HMGN1-206ENST00000431390 LPAL2Q16609 132 aa17.89■□□□□ 0.45
HMGN1-206ENST00000431390 ZNF658BQ4V348 819 aaPredicted RBP17.89■□□□□ 0.45
HMGN1-206ENST00000431390 CYHR1Q6ZMK1 362 aa17.89■□□□□ 0.45
HMGN1-206ENST00000431390 LRRC34Q8IZ02 419 aa17.89■□□□□ 0.45
HMGN1-206ENST00000431390 OR6Y1Q8NGX8 325 aa17.89■□□□□ 0.45
HMGN1-206ENST00000431390 NSRP1Q9H0G5 558 aaKnown RBP17.89■□□□□ 0.45
HMGN1-206ENST00000431390 C6orf106Q9H6K1 298 aaPredicted RBP17.89■□□□□ 0.45
HMGN1-206ENST00000431390 RMI1Q9H9A7 625 aa17.89■□□□□ 0.45
HMGN1-206ENST00000431390 GMEB2Q9UKD1 530 aa17.89■□□□□ 0.45
HMGN1-206ENST00000431390 IKZF3Q9UKT9 509 aa17.89■□□□□ 0.45
HMGN1-206ENST00000431390 TMCO1Q9UM00 188 aa17.89■□□□□ 0.45
HMGN1-206ENST00000431390 DMTF1Q9Y222 760 aa17.89■□□□□ 0.45
HMGN1-206ENST00000431390 TMEM98Q9Y2Y6 226 aa17.89■□□□□ 0.45
HMGN1-206ENST00000431390 DNMT3AQ9Y6K1 912 aaPredicted RBP17.89■□□□□ 0.45
HMGN1-206ENST00000431390 KLHL33A6NCF5 533 aa17.88■□□□□ 0.45
HMGN1-206ENST00000431390 CACNB4O00305 520 aaPredicted RBP17.88■□□□□ 0.45
HMGN1-206ENST00000431390 TOR1BO14657 336 aa17.88■□□□□ 0.45
HMGN1-206ENST00000431390 LIN7AO14910 233 aaPredicted RBP17.88■□□□□ 0.45
HMGN1-206ENST00000431390 IPO13O94829 963 aaKnown RBP17.88■□□□□ 0.45
HMGN1-206ENST00000431390 FAM107AO95990 144 aa17.88■□□□□ 0.45
HMGN1-206ENST00000431390 IGHV4-34P06331 123 aa17.88■□□□□ 0.45
HMGN1-206ENST00000431390 DRD4P21917 467 aa17.88■□□□□ 0.45
HMGN1-206ENST00000431390 KIAA1024LP59773 190 aa17.88■□□□□ 0.45
HMGN1-206ENST00000431390 PLOD1Q02809 727 aaPredicted RBP17.88■□□□□ 0.45
HMGN1-206ENST00000431390 BST1Q10588 318 aa17.88■□□□□ 0.45
HMGN1-206ENST00000431390 STX3Q13277 289 aa17.88■□□□□ 0.45
HMGN1-206ENST00000431390 SYTL3Q4VX76 610 aa17.88■□□□□ 0.45
HMGN1-206ENST00000431390 NAPRTQ6XQN6 538 aa17.88■□□□□ 0.45
HMGN1-206ENST00000431390 LRRTM4Q86VH4 590 aa17.88■□□□□ 0.45
HMGN1-206ENST00000431390 ZNF547Q8IVP9 402 aa17.88■□□□□ 0.45
HMGN1-206ENST00000431390 GLMNQ92990 594 aa17.88■□□□□ 0.45
HMGN1-206ENST00000431390 PCED1AQ9H1Q7 454 aa17.88■□□□□ 0.45
HMGN1-206ENST00000431390 CDYLQ9Y232 598 aa17.88■□□□□ 0.45
HMGN1-206ENST00000431390 HS3ST3A1Q9Y663 406 aa17.88■□□□□ 0.45
HMGN1-206ENST00000431390 TPRP12270 2363 aaKnown RBP17.87■□□□□ 0.45
HMGN1-206ENST00000431390 SLC5A10A0PJK1 596 aa17.87■□□□□ 0.45
HMGN1-206ENST00000431390 A8MT66 165 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms