RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 RBMS1P29558 406 aaKnown RBP17■□□□□ 0.31
CTDSP1-203ENST00000431127 LIMK2P53671 638 aa17■□□□□ 0.31
CTDSP1-203ENST00000431127 GPR18Q14330 331 aa17■□□□□ 0.31
CTDSP1-203ENST00000431127 SEMA3AQ14563 771 aa17■□□□□ 0.31
CTDSP1-203ENST00000431127 MORF4L2Q15014 288 aa17■□□□□ 0.31
CTDSP1-203ENST00000431127 ANKRD20A4Q4UJ75 823 aa17■□□□□ 0.31
CTDSP1-203ENST00000431127 ZNF658BQ4V348 819 aaPredicted RBP17■□□□□ 0.31
CTDSP1-203ENST00000431127 DNAJC21Q5F1R6 531 aaKnown RBP17■□□□□ 0.31
CTDSP1-203ENST00000431127 C3orf38Q5JPI3 329 aa17■□□□□ 0.31
CTDSP1-203ENST00000431127 RNF187Q5TA31 235 aaPredicted RBP17■□□□□ 0.31
CTDSP1-203ENST00000431127 CAPRIN2Q6IMN6 1127 aaKnown RBP17■□□□□ 0.31
CTDSP1-203ENST00000431127 IGF2-ASQ6U949 168 aa17■□□□□ 0.31
CTDSP1-203ENST00000431127 RAB11FIP2Q7L804 512 aa17■□□□□ 0.31
CTDSP1-203ENST00000431127 TMPRSS9Q7Z410 1059 aa17■□□□□ 0.31
CTDSP1-203ENST00000431127 MAATS1Q7Z4T9 603 aa17■□□□□ 0.31
CTDSP1-203ENST00000431127 TMEM135Q86UB9 458 aa17■□□□□ 0.31
CTDSP1-203ENST00000431127 LRRC6Q86X45 466 aa17■□□□□ 0.31
CTDSP1-203ENST00000431127 OTUD6BQ8N6M0 293 aa17■□□□□ 0.31
CTDSP1-203ENST00000431127 NCSTNQ92542 709 aa17■□□□□ 0.31
CTDSP1-203ENST00000431127 C16orf45Q96MC5 204 aaPredicted RBP17■□□□□ 0.31
CTDSP1-203ENST00000431127 C12orf66Q96MD2 445 aa17■□□□□ 0.31
CTDSP1-203ENST00000431127 TCF12Q99081 682 aa17■□□□□ 0.31
CTDSP1-203ENST00000431127 KRT12Q99456 494 aa17■□□□□ 0.31
CTDSP1-203ENST00000431127 SEMA6CQ9H3T2 930 aa17■□□□□ 0.31
CTDSP1-203ENST00000431127 COG4Q9H9E3 785 aa17■□□□□ 0.31
CTDSP1-203ENST00000431127 MARCH4Q9P2E8 410 aaPredicted RBP17■□□□□ 0.31
CTDSP1-203ENST00000431127 PRSS21Q9Y6M0 314 aa17■□□□□ 0.31
CTDSP1-203ENST00000431127 RPS6KL1Q9Y6S9 549 aa17■□□□□ 0.31
CTDSP1-203ENST00000431127 COLEC10Q9Y6Z7 277 aa17■□□□□ 0.31
CTDSP1-203ENST00000431127 IGHV5-10-1A0A0J9YXX1 117 aa16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 PLD2O14939 933 aa16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 TTI1O43156 1089 aa16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 BRINP1O60477 761 aa16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 USP1O94782 785 aa16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 UBXN7O94888 489 aa16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 TUBB4AP04350 444 aa16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 HOXB3P14651 431 aaPredicted RBP16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 AMD1P17707 334 aa16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 CSF2RBP32927 897 aa16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 MAPK9P45984 424 aa16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 ARCN1P48444 511 aaKnown RBP16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 CD151P48509 253 aa16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 KRT33BQ14525 404 aa16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 KLHL35Q6PF15 583 aa16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 XKR5Q6UX68 686 aa16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 ZNF574Q6ZN55 896 aaPredicted RBP16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 PLXDC1Q8IUK5 500 aa16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 FBXO39Q8N4B4 442 aa16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 GPR150Q8NGU9 434 aa16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 ELMO1Q92556 727 aa16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 STAMBPL1Q96FJ0 436 aa16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 SNF8Q96H20 258 aa16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 SIGLEC10Q96LC7 697 aa16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 ZNF578Q96N58 590 aaPredicted RBP16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 INSM2Q96T92 566 aaPredicted RBP16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 NAT9Q9BTE0 207 aa16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 TBC1D10AQ9BXI6 508 aa16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 PDP2Q9P2J9 529 aa16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 VPS9D1Q9Y2B5 631 aa16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 COL27A1Q8IZC6 1860 aaPredicted RBP16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 LAMA5O15230 3695 aa16.99■□□□□ 0.31
CTDSP1-203ENST00000431127 FAM187AA6NFU0 413 aa16.98■□□□□ 0.31
CTDSP1-203ENST00000431127 EFCAB8A8MWE9 144 aa16.98■□□□□ 0.31
CTDSP1-203ENST00000431127 OGNP20774 298 aaKnown RBP16.98■□□□□ 0.31
CTDSP1-203ENST00000431127 ERVPABLB-1P60509 514 aa16.98■□□□□ 0.31
CTDSP1-203ENST00000431127 CFHR1Q03591 330 aa16.98■□□□□ 0.31
CTDSP1-203ENST00000431127 THOC5Q13769 683 aaKnown RBP16.98■□□□□ 0.31
CTDSP1-203ENST00000431127 SYTL3Q4VX76 610 aa16.98■□□□□ 0.31
CTDSP1-203ENST00000431127 NEPROQ6NW34 567 aa16.98■□□□□ 0.31
CTDSP1-203ENST00000431127 LDB1Q86U70 411 aaPredicted RBP16.98■□□□□ 0.31
CTDSP1-203ENST00000431127 PDIK1LQ8N165 341 aa16.98■□□□□ 0.31
CTDSP1-203ENST00000431127 LILRA3Q8N6C8 439 aaPredicted RBP16.98■□□□□ 0.31
CTDSP1-203ENST00000431127 BBOF1Q8ND07 529 aa16.98■□□□□ 0.31
CTDSP1-203ENST00000431127 SPDYE1Q8NFV5 336 aaPredicted RBP16.98■□□□□ 0.31
CTDSP1-203ENST00000431127 ZNF669Q96BR6 464 aaPredicted RBP16.98■□□□□ 0.31
CTDSP1-203ENST00000431127 CCDC74BQ96LY2 380 aa16.98■□□□□ 0.31
CTDSP1-203ENST00000431127 RMDN2Q96LZ7 410 aa16.98■□□□□ 0.31
CTDSP1-203ENST00000431127 SLC46A1Q96NT5 459 aa16.98■□□□□ 0.31
CTDSP1-203ENST00000431127 TRIM51Q9BSJ1 452 aa16.98■□□□□ 0.31
CTDSP1-203ENST00000431127 CARD6Q9BX69 1037 aa16.98■□□□□ 0.31
CTDSP1-203ENST00000431127 OR52A5Q9H2C5 316 aa16.98■□□□□ 0.31
CTDSP1-203ENST00000431127 THSD1Q9NS62 852 aa16.98■□□□□ 0.31
CTDSP1-203ENST00000431127 GNPTGQ9UJJ9 305 aa16.98■□□□□ 0.31
CTDSP1-203ENST00000431127 PKD1L2Q7Z442 2459 aa16.97■□□□□ 0.31
CTDSP1-203ENST00000431127 FREM2Q5SZK8 3169 aa16.97■□□□□ 0.31
CTDSP1-203ENST00000431127 PRAMEF33A0A0G2JMD5 474 aa16.97■□□□□ 0.31
CTDSP1-203ENST00000431127 ZCWPW2A0A1B0GU75 182 aa16.97■□□□□ 0.31
CTDSP1-203ENST00000431127 A0A1W2PNU3 283 aaPredicted RBP16.97■□□□□ 0.31
CTDSP1-203ENST00000431127 SEC31AO94979 1220 aaKnown RBP16.97■□□□□ 0.31
CTDSP1-203ENST00000431127 TTC4O95801 387 aa16.97■□□□□ 0.31
CTDSP1-203ENST00000431127 ITGA2BP08514 1039 aa16.97■□□□□ 0.31
CTDSP1-203ENST00000431127 JMJD7P0C870 316 aa16.97■□□□□ 0.31
CTDSP1-203ENST00000431127 THRAP10827 490 aa16.97■□□□□ 0.31
CTDSP1-203ENST00000431127 PGAM1P18669 254 aa16.97■□□□□ 0.31
CTDSP1-203ENST00000431127 RPS3P23396 243 aaKnown RBP eCLIP16.97■□□□□ 0.31
CTDSP1-203ENST00000431127 CKAP4Q07065 602 aaKnown RBP16.97■□□□□ 0.31
CTDSP1-203ENST00000431127 LONRF1Q17RB8 773 aa16.97■□□□□ 0.31
CTDSP1-203ENST00000431127 TYSND1Q2T9J0 566 aa16.97■□□□□ 0.31
CTDSP1-203ENST00000431127 TBC1D25Q3MII6 688 aa16.97■□□□□ 0.31
CTDSP1-203ENST00000431127 PTRHD1Q6GMV3 140 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms