RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 DGUOKQ16854 277 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 MSS51Q4VC12 460 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 CCNYL2Q5T2Q4 361 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 GK5Q6ZS86 529 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 CTU1Q7Z7A3 348 aaKnown RBP11.38□□□□□ -0.59
PTCH1-208ENST00000430669 AMZ2Q86W34 360 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 SIRPGQ9P1W8 387 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 UPK3BL1B0FP48 263 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 UPK3BL2E5RIL1 263 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 MYL12BO14950 172 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 TYROBPO43914 113 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 TNNI3P19429 210 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 UGT2B15P54855 530 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 MYLK3Q32MK0 819 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 ZFYVE19Q96K21 471 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 CLPTM1LQ96KA5 538 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 MIPEPQ99797 713 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 TDP1Q9NUW8 608 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 PGAP2Q9UHJ9 254 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 CXorf49A8MYA2 514 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-208ENST00000430669 SIX1Q15475 284 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-208ENST00000430669 ARMCX4Q5H9R4 360 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 EPGNQ6UW88 154 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 LDB1Q86U70 411 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-208ENST00000430669 CPNE9Q8IYJ1 553 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 GPR156Q8NFN8 814 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 SLC22A18Q96BI1 424 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 RIBC2Q9H4K1 309 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 SAGE1Q9NXZ1 904 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 TALDO1P37837 337 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 HSPA7P48741 367 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 ATP4BP51164 291 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 BLKP51451 505 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 CDH13P55290 713 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 C21orf59P57076 290 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 SWT1Q5T5J6 900 aaKnown RBP11.38□□□□□ -0.59
PTCH1-208ENST00000430669 MBLAC2Q68D91 279 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 ZC3H7AQ8IWR0 971 aaKnown RBP11.38□□□□□ -0.59
PTCH1-208ENST00000430669 SLC24A3Q9HC58 644 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 EXOSC4Q9NPD3 245 aaKnown RBP11.38□□□□□ -0.59
PTCH1-208ENST00000430669 C1orf109Q9NX04 203 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 TRPS1Q9UHF7 1281 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 CLK3P49761 638 aaKnown RBP11.38□□□□□ -0.59
PTCH1-208ENST00000430669 CCR8P51685 355 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 WDR4P57081 412 aaKnown RBP11.38□□□□□ -0.59
PTCH1-208ENST00000430669 OLR1P78380 273 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 CLEC6AQ6EIG7 209 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 MGRN1O60291 552 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 MPZL2O60487 215 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 LEPRP48357 1165 aaKnown RBP11.38□□□□□ -0.59
PTCH1-208ENST00000430669 RABGGTBP53611 331 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 SF1Q15637 639 aaKnown RBP11.38□□□□□ -0.59
PTCH1-208ENST00000430669 ANKLE1Q8NAG6 615 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 PAWRQ96IZ0 340 aaKnown RBP11.38□□□□□ -0.59
PTCH1-208ENST00000430669 B3GALT6Q96L58 329 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 PSKH2Q96QS6 385 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 CCM2Q9BSQ5 444 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 SCELO95171 688 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 EIF2S1P05198 315 aaKnown RBP11.38□□□□□ -0.59
PTCH1-208ENST00000430669 ATP1B2P14415 290 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-208ENST00000430669 MTHFRP42898 656 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 TPRG1Q6ZUI0 275 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 ZNF614Q8N883 585 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 TXLNGYQ9BZA5 131 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 SLC32A1Q9H598 525 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 GEMIN8Q9NWZ8 242 aaKnown RBP11.38□□□□□ -0.59
PTCH1-208ENST00000430669 EFCAB10A6NFE3 127 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 UGT1A9O60656 530 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 HNRNPCP07910 306 aaKnown RBP eCLIP11.37□□□□□ -0.59
PTCH1-208ENST00000430669 GJA5P36382 358 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 ZNF460Q14592 562 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 ZBTB6Q15916 424 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 GPAT3Q53EU6 434 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 PLEKHS1Q5SXH7 462 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 ALKAL1Q6UXT8 129 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 TMEM126BQ8IUX1 230 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 REXO5Q96IC2 774 aaKnown RBP11.37□□□□□ -0.59
PTCH1-208ENST00000430669 UGT1A7Q9HAW7 530 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 UGT1A10Q9HAW8 530 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 UGT1A8Q9HAW9 530 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 PAPOLBQ9NRJ5 636 aaKnown RBP11.37□□□□□ -0.59
PTCH1-208ENST00000430669 PHF24Q9UPV7 400 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 J3KR12 359 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 HAS3O00219 553 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 FAM189A1O60320 539 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 GSTM5P46439 218 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 RPS7P62081 194 aaKnown RBP11.37□□□□□ -0.59
PTCH1-208ENST00000430669 CYP4F8P98187 520 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 PCLAFQ15004 111 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 ATXN7L2Q5T6C5 722 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-208ENST00000430669 GSTCDQ8NEC7 633 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 ZBTB26Q9HCK0 441 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 MAFKO60675 156 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 NR1D2Q14995 579 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 TMEM135Q86UB9 458 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 LENG8Q96PV6 779 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-208ENST00000430669 RAD9AQ99638 391 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 OSBPL10Q9BXB5 764 aa11.37□□□□□ -0.59
PTCH1-208ENST00000430669 SAMHD1Q9Y3Z3 626 aaKnown RBP11.37□□□□□ -0.59
PTCH1-208ENST00000430669 PRRC2BQ5JSZ5 2229 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms