RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 H0Y858 1186 aa12.74□□□□□ -0.37
PTCH1-207ENST00000429896 SLC28A1O00337 649 aa12.74□□□□□ -0.37
PTCH1-207ENST00000429896 RECQL5O94762 991 aaPredicted RBP12.74□□□□□ -0.37
PTCH1-207ENST00000429896 UMPSP11172 480 aa12.74□□□□□ -0.37
PTCH1-207ENST00000429896 NTSP30990 170 aa12.74□□□□□ -0.37
PTCH1-207ENST00000429896 HYAL1Q12794 435 aa12.74□□□□□ -0.37
PTCH1-207ENST00000429896 SLC10A2Q12908 348 aaPredicted RBP12.74□□□□□ -0.37
PTCH1-207ENST00000429896 PRPF38BQ5VTL8 546 aaKnown RBP12.74□□□□□ -0.37
PTCH1-207ENST00000429896 CYB5D1Q6P9G0 228 aa12.74□□□□□ -0.37
PTCH1-207ENST00000429896 SLC9B2Q86UD5 537 aa12.74□□□□□ -0.37
PTCH1-207ENST00000429896 TMEM120AQ9BXJ8 343 aa12.74□□□□□ -0.37
PTCH1-207ENST00000429896 PCBD2Q9H0N5 130 aa12.74□□□□□ -0.37
PTCH1-207ENST00000429896 MRM3Q9HC36 420 aaKnown RBP12.74□□□□□ -0.37
PTCH1-207ENST00000429896 TSC22D4Q9Y3Q8 395 aa12.74□□□□□ -0.37
PTCH1-207ENST00000429896 WASH4PA8MWX3 477 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 AXIN1O15169 862 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 IFNA16P05015 189 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 HMGA1P17096 107 aaKnown RBP12.73□□□□□ -0.37
PTCH1-207ENST00000429896 IGFBP6P24592 240 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-207ENST00000429896 AP5B1Q2VPB7 878 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 NPWQ8N729 165 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 AGAP2Q99490 1192 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 SH3GL3Q99963 347 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 SIKE1Q9BRV8 207 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 ZNF180Q9UJW8 692 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 C2P06681 752 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 ADRB3P13945 408 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 HSD17B2P37059 387 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 NAGLUP54802 743 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 NAE1Q13564 534 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 GRIN2CQ14957 1233 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 Q6ZVL8 140 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 POMGNT2Q8NAT1 580 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 DNAJC9Q8WXX5 260 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 WDR92Q96MX6 357 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 CTSOP43234 321 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-207ENST00000429896 HNRNPA1L2Q32P51 320 aaKnown RBP12.73□□□□□ -0.37
PTCH1-207ENST00000429896 UTS2BQ765I0 119 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 TRAM1L1Q8N609 369 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 KCTD3Q9Y597 815 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 IGLON5A6NGN9 336 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 POP7O75817 140 aaKnown RBP12.73□□□□□ -0.37
PTCH1-207ENST00000429896 SNUPNO95149 360 aaKnown RBP12.73□□□□□ -0.37
PTCH1-207ENST00000429896 LAPTM5Q13571 262 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 LIPMQ5VYY2 423 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 CHST14Q8NCH0 376 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 SLC39A13Q96H72 371 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 ASB16Q96NS5 453 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 SYT11Q9BT88 431 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 TDRD1Q9BXT4 1180 aaKnown RBP12.73□□□□□ -0.37
PTCH1-207ENST00000429896 KRCC1Q9NPI7 259 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-207ENST00000429896 TCF7L2Q9NQB0 619 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 PSME2Q9UL46 239 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 KLHL20Q9Y2M5 609 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 HOXD9P28356 352 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-207ENST00000429896 AASDHQ4L235 1098 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-207ENST00000429896 FAM182AQ5T1J6 154 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 WLSQ5T9L3 541 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 FAM109BQ6ICB4 259 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-207ENST00000429896 RABEPKQ7Z6M1 372 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 CPNE9Q8IYJ1 553 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 KCTD14Q9BQ13 255 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-207ENST00000429896 CRISPLD1Q9H336 500 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 SLC2A6Q9UGQ3 507 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 TMCC3Q9ULS5 477 aa12.73□□□□□ -0.37
PTCH1-207ENST00000429896 PRAMEF12O95522 483 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 SYPP08247 313 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 RASA2Q15283 850 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 TCHHL1Q5QJ38 904 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-207ENST00000429896 CHSY3Q70JA7 882 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 CYP4X1Q8N118 509 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 ATG16L2Q8NAA4 619 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 LMLNQ96KR4 655 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 TMEM265A0A087WTH1 108 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 CREB5Q02930 508 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 VAC14Q08AM6 782 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 ACAP2Q15057 778 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 TMPRSS11BQ86T26 416 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 EPHX4Q8IUS5 362 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 SLC22A12Q96S37 553 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 EXO5Q9H790 373 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 GRHL1Q9NZI5 618 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 BLOC1S6Q9UL45 172 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 DICER1Q9UPY3 1922 aaKnown RBP12.72□□□□□ -0.37
PTCH1-207ENST00000429896 PRR5-ARHGAP8B1AHC4 643 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 THRAP10827 490 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 NFATC2Q13469 925 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 GSTA3Q16772 222 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 FSTL4Q6MZW2 842 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 MACC1Q6ZN28 852 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 RIPOR1Q6ZS17 1223 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 PIWIL4Q7Z3Z4 852 aaKnown RBP12.72□□□□□ -0.37
PTCH1-207ENST00000429896 CDYL2Q8N8U2 506 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 ATXN2LQ8WWM7 1075 aaKnown RBP12.72□□□□□ -0.37
PTCH1-207ENST00000429896 MARK4Q96L34 752 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 TRIM8Q9BZR9 551 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 POLR1DQ9Y2S0 133 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 MYH11P35749 1972 aa12.72□□□□□ -0.37
PTCH1-207ENST00000429896 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-207ENST00000429896 STK16O75716 305 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms