RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 HTRA1Q92743 480 aa15.21■□□□□ 0.03
PTPRF-206ENST00000429895 OR51V1Q9H2C8 321 aa15.21■□□□□ 0.03
PTPRF-206ENST00000429895 PLLPQ9Y342 182 aa15.21■□□□□ 0.03
PTPRF-206ENST00000429895 SALL3Q9BXA9 1300 aa15.21■□□□□ 0.03
PTPRF-206ENST00000429895 FAM172BPA6NC97 362 aa15.21■□□□□ 0.03
PTPRF-206ENST00000429895 ZNF823P16415 610 aa15.21■□□□□ 0.03
PTPRF-206ENST00000429895 ALDH4A1P30038 563 aa15.21■□□□□ 0.03
PTPRF-206ENST00000429895 CLCN7P51798 805 aa15.21■□□□□ 0.03
PTPRF-206ENST00000429895 MXD1Q05195 221 aa15.21■□□□□ 0.03
PTPRF-206ENST00000429895 KREMEN2Q8NCW0 462 aa15.21■□□□□ 0.03
PTPRF-206ENST00000429895 CRELD1Q96HD1 420 aa15.21■□□□□ 0.03
PTPRF-206ENST00000429895 LPIN3Q9BQK8 851 aa15.21■□□□□ 0.03
PTPRF-206ENST00000429895 GMEB2Q9UKD1 530 aa15.21■□□□□ 0.03
PTPRF-206ENST00000429895 USP2O75604 605 aaPredicted RBP15.21■□□□□ 0.02
PTPRF-206ENST00000429895 VLDLRP98155 873 aa15.21■□□□□ 0.02
PTPRF-206ENST00000429895 PLD5Q8N7P1 536 aa15.21■□□□□ 0.02
PTPRF-206ENST00000429895 SLC38A4Q969I6 547 aa15.21■□□□□ 0.02
PTPRF-206ENST00000429895 MFSD3Q96ES6 412 aa15.21■□□□□ 0.02
PTPRF-206ENST00000429895 CTPS2Q9NRF8 586 aa15.21■□□□□ 0.02
PTPRF-206ENST00000429895 POLR3BQ9NW08 1133 aaPredicted RBP15.21■□□□□ 0.02
PTPRF-206ENST00000429895 GRIP1Q9Y3R0 1128 aa15.21■□□□□ 0.02
PTPRF-206ENST00000429895 LGR5O75473 907 aa15.21■□□□□ 0.02
PTPRF-206ENST00000429895 METTL18O95568 372 aa15.21■□□□□ 0.02
PTPRF-206ENST00000429895 TPSB2P20231 275 aa15.21■□□□□ 0.02
PTPRF-206ENST00000429895 VARSP26640 1264 aaKnown RBP15.21■□□□□ 0.02
PTPRF-206ENST00000429895 OC90Q02509 493 aaPredicted RBP15.21■□□□□ 0.02
PTPRF-206ENST00000429895 SP140Q13342 867 aa15.21■□□□□ 0.02
PTPRF-206ENST00000429895 TPSAB1Q15661 275 aa15.21■□□□□ 0.02
PTPRF-206ENST00000429895 LDLRAP1Q5SW96 308 aa15.21■□□□□ 0.02
PTPRF-206ENST00000429895 RASGRP3Q8IV61 690 aa15.21■□□□□ 0.02
PTPRF-206ENST00000429895 IRGQQ8WZA9 623 aa15.21■□□□□ 0.02
PTPRF-206ENST00000429895 AZIN2Q96A70 460 aa15.21■□□□□ 0.02
PTPRF-206ENST00000429895 COQ8BQ96D53 544 aa15.21■□□□□ 0.02
PTPRF-206ENST00000429895 ZNF570Q96NI8 536 aa15.21■□□□□ 0.02
PTPRF-206ENST00000429895 TRMOQ9BU70 441 aa15.21■□□□□ 0.02
PTPRF-206ENST00000429895 FOXO6A8MYZ6 492 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 NCK1P16333 377 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 PRR5P85299 388 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 LIPEQ05469 1076 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 NAPRTQ6XQN6 538 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 FADS3Q9Y5Q0 445 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 DIP2CQ9Y2E4 1556 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 UBXN7O94888 489 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 CRY2Q49AN0 593 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 C6orf52Q5T4I8 152 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 ENPP7Q6UWV6 458 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 NUP54Q7Z3B4 507 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 CPNE9Q8IYJ1 553 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 ZNF567Q8N184 647 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 C1orf127Q8N9H9 656 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 GPR151Q8TDV0 419 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 SLC25A36Q96CQ1 311 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 GTPBP2Q9BX10 602 aaKnown RBP15.2■□□□□ 0.02
PTPRF-206ENST00000429895 PCDHA2Q9Y5H9 948 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 DEPDC5O75140 1603 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 GPR25O00155 361 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 DUSP11O75319 330 aaKnown RBP15.2■□□□□ 0.02
PTPRF-206ENST00000429895 TM7SF2O76062 418 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 CYB5AP00167 134 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 RPL5P46777 297 aaKnown RBP15.2■□□□□ 0.02
PTPRF-206ENST00000429895 GDI2P50395 445 aaKnown RBP15.2■□□□□ 0.02
PTPRF-206ENST00000429895 GMFBP60983 142 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 ZYG11AQ6WRX3 759 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 TRPV1Q8NER1 839 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 ARL5AQ9Y689 179 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 LRRC10BA6NIK2 292 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 WFS1O76024 890 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 AP2A1O95782 977 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 GNSP15586 552 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 LMO2P25791 158 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 GRK6P43250 576 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 PLGLB1Q02325 96 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 AHSA2Q719I0 299 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 ZNF280BQ86YH2 543 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 HCAR2Q8TDS4 363 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 WDR60Q8WVS4 1066 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 SLC44A1Q8WWI5 657 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 PLD4Q96BZ4 506 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 RAPGEFL1Q9UHV5 662 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 SYN3O14994 580 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 SDC2P34741 201 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 PAOXQ6QHF9 649 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 C15orf52Q6ZUT6 534 aaKnown RBP15.2■□□□□ 0.02
PTPRF-206ENST00000429895 OR10H4Q8NGA5 316 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 OR2T34Q8NGX1 318 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 OR2T3Q8NH03 318 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 OSBPL2Q9H1P3 480 aa15.2■□□□□ 0.02
PTPRF-206ENST00000429895 RGS10O43665 173 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 CHRM5P08912 532 aaPredicted RBP15.19■□□□□ 0.02
PTPRF-206ENST00000429895 PRKCZQ05513 592 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 FCHO2Q0JRZ9 810 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 PUM1Q14671 1186 aaKnown RBP eCLIP15.19■□□□□ 0.02
PTPRF-206ENST00000429895 BMT2Q1RMZ1 405 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 ALG1LQ6GMV1 187 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 ARMCX6Q7L4S7 300 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 AMIGO1Q86WK6 493 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 DIRAS2Q96HU8 199 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 ACBD6Q9BR61 282 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 TRIM2Q9C040 744 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 CST11Q9H112 138 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms