RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 GPSM1Q86YR5 675 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 CLVS1Q8IUQ0 354 aaPredicted RBP8.59□□□□□ -1.03
GABPB1-205ENST00000429662 OR8J3Q8NGG0 315 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 DNAJB8Q8NHS0 232 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 EXT2Q93063 718 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 IGSF8Q969P0 613 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 FUBP1Q96AE4 644 aaKnown RBP8.59□□□□□ -1.03
GABPB1-205ENST00000429662 ISOC1Q96CN7 298 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 MRPL38Q96DV4 380 aaKnown RBP8.59□□□□□ -1.03
GABPB1-205ENST00000429662 MAGED4Q96JG8 741 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 NSMCE2Q96MF7 247 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 PSKH2Q96QS6 385 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 PRRX2Q99811 253 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 SH3GL1Q99961 368 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 CINPQ9BW66 212 aaPredicted RBP8.59□□□□□ -1.03
GABPB1-205ENST00000429662 NPLQ9BXD5 320 aaPredicted RBP8.59□□□□□ -1.03
GABPB1-205ENST00000429662 ADGRE3Q9BY15 652 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 UGT2B28Q9BY64 529 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 SEZ6LQ9BYH1 1024 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 IL1RL2Q9HB29 575 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 PALMDQ9NP74 551 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 HEBP1Q9NRV9 189 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 GALNT8Q9NY28 637 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 UBA2Q9UBT2 640 aaPredicted RBP8.59□□□□□ -1.03
GABPB1-205ENST00000429662 TRMT6Q9UJA5 497 aaKnown RBP8.59□□□□□ -1.03
GABPB1-205ENST00000429662 PCTPQ9UKL6 214 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 ZNF711Q9Y462 761 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 KCTD3Q9Y597 815 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 ARL5AQ9Y689 179 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 ZNF638Q14966 1978 aaKnown RBP8.58□□□□□ -1.04
GABPB1-205ENST00000429662 ZFYVE26Q68DK2 2539 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 SHROOM3Q8TF72 1996 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 A0A0J9YVX5 310 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 UBA6A0AVT1 1052 aaPredicted RBP8.58□□□□□ -1.04
GABPB1-205ENST00000429662 SH3PXD2BA1X283 911 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 TRIM64BA6NI03 449 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 H3BMM5 538 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 H7C0S8 307 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 INSIG1O15503 277 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 MBTPS2O43462 519 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 KDELR3O43731 214 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 MGEA5O60502 916 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 SYNCRIPO60506 623 aaKnown RBP8.58□□□□□ -1.04
GABPB1-205ENST00000429662 SIX3O95343 332 aaPredicted RBP8.58□□□□□ -1.04
GABPB1-205ENST00000429662 MT-CO1P00395 513 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 ALBP02768 609 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 ESR1P03372 595 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 S100BP04271 92 aaPredicted RBP8.58□□□□□ -1.04
GABPB1-205ENST00000429662 PCSK6P29122 969 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 FMO4P31512 558 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 PTGER3P43115 390 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 RANBP1P43487 201 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 PGFP49763 221 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 TMBIM6P55061 237 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 CDH4P55283 916 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 FOXA1P55317 472 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 ADARB1P78563 741 aaKnown RBP8.58□□□□□ -1.04
GABPB1-205ENST00000429662 GNA12Q03113 381 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 SEMA3AQ14563 771 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 CBX2Q14781 532 aaPredicted RBP8.58□□□□□ -1.04
GABPB1-205ENST00000429662 MYBPC3Q14896 1274 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 PCBP2Q15366 365 aaKnown RBP eCLIP8.58□□□□□ -1.045e-39■■■■■ 107
GABPB1-205ENST00000429662 RBBP7Q16576 425 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 DDR2Q16832 855 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 FAM98BQ52LJ0 330 aaKnown RBP8.58□□□□□ -1.04
GABPB1-205ENST00000429662 TCEAL5Q5H9L2 206 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 C10orf120Q5SQS8 335 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 TTC23Q5W5X9 447 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 NANOGP8Q6NSW7 305 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 TTC23LQ6PF05 361 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 GLT6D1Q7Z4J2 308 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 ZFAND4Q86XD8 727 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 EPHX4Q8IUS5 362 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 EGFL6Q8IUX8 553 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 SFRP1Q8N474 314 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 GLB1L3Q8NCI6 653 aaPredicted RBP8.58□□□□□ -1.04
GABPB1-205ENST00000429662 OR52E4Q8NGH9 312 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 OR13C4Q8NGS5 318 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 BPIFB1Q8TDL5 484 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 GIPC2Q8TF65 315 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 HASPINQ8TF76 798 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 CYGBQ8WWM9 190 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 KCNJ9Q92806 393 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 BORCS5Q969J3 196 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 SDCCAG3Q96C92 435 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 BIRC7Q96CA5 298 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 AURKBQ96GD4 344 aaPredicted RBP8.58□□□□□ -1.04
GABPB1-205ENST00000429662 PPP3R2Q96LZ3 170 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 CCDC115Q96NT0 180 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 CNTNAP3BQ96NU0 1288 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 FAM193BQ96PV7 902 aaPredicted RBP8.58□□□□□ -1.04
GABPB1-205ENST00000429662 ZBTB18Q99592 522 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 SLC39A3Q9BRY0 314 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 CNTNAP3Q9BZ76 1288 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 NANOGQ9H9S0 305 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 CXorf21Q9HAI6 301 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 SEMA4BQ9NPR2 832 aaPredicted RBP8.58□□□□□ -1.04
GABPB1-205ENST00000429662 EGFL7Q9UHF1 273 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 NUDT5Q9UKK9 219 aa8.58□□□□□ -1.04
GABPB1-205ENST00000429662 OAZ3Q9UMX2 235 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms