RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 GRM6O15303 877 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 RGS14O43566 566 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 ZNF821O75541 412 aaPredicted RBP13.46□□□□□ -0.25
THBS3-202ENST00000428962 FGF18O76093 207 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 WDR47O94967 919 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 CSPG5O95196 566 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 GUCA1CO95843 209 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 SRCP12931 536 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 PSMC3P17980 439 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 PEX19P40855 299 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 HSPA7P48741 367 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 CDKL1Q00532 357 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 MYLK3Q32MK0 819 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 TIGD2Q4W5G0 525 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 DGKKQ5KSL6 1271 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 CDKL4Q5MAI5 379 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 TTC23LQ6PF05 361 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 Q6ZSR9 355 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 PTRH1Q86Y79 214 aaKnown RBP13.46□□□□□ -0.25
THBS3-202ENST00000428962 SFRP1Q8N474 314 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 DPP10Q8N608 796 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 ZNF557Q8N988 423 aaPredicted RBP13.46□□□□□ -0.25
THBS3-202ENST00000428962 VPS33AQ96AX1 596 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 ECHDC3Q96DC8 303 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 SCRN2Q96FV2 425 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 SLC45A3Q96JT2 553 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 TEX37Q96LM6 180 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 EMILIN2Q9BXX0 1053 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 MRPS26Q9BYN8 205 aaKnown RBP13.46□□□□□ -0.25
THBS3-202ENST00000428962 CD244Q9BZW8 370 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 COQ10BQ9H8M1 238 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 ZDHHC3Q9NYG2 299 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 HECAQ9UBI9 543 aaPredicted RBP13.46□□□□□ -0.25
THBS3-202ENST00000428962 AURKCQ9UQB9 309 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 PPIL1Q9Y3C6 166 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 AGAP14A8MT82 685 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 K7EPI3 171 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 SLC28A1O00337 649 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 TNRC18O15417 2968 aaPredicted RBP13.46□□□□□ -0.26
THBS3-202ENST00000428962 TIPRLO75663 272 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 FGF19O95750 216 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 ENO2P09104 434 aaPredicted RBP13.46□□□□□ -0.26
THBS3-202ENST00000428962 PABPC4LP0CB38 370 aaKnown RBP13.46□□□□□ -0.26
THBS3-202ENST00000428962 UGT1A6P19224 532 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 UGT1A1P22309 533 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 UGT1A4P22310 534 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 CALRP27797 417 aaKnown RBP13.46□□□□□ -0.26
THBS3-202ENST00000428962 UGT1A3P35503 534 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 UGT1A5P35504 534 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 GSK3BP49841 420 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 HTR6P50406 440 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 SH3BGRP55822 239 aaPredicted RBP13.46□□□□□ -0.26
THBS3-202ENST00000428962 LIPEQ05469 1076 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 CRTC1Q6UUV9 634 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 CYP20A1Q6UW02 462 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 NECAB2Q7Z6G3 386 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 SPPL2CQ8IUH8 684 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 CLDN19Q8N6F1 224 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 DCBLD1Q8N8Z6 715 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 PROKR1Q8TCW9 393 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 ZNF641Q96N77 438 aaPredicted RBP13.46□□□□□ -0.26
THBS3-202ENST00000428962 ZBTB18Q99592 522 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 COPS8Q99627 209 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 CPEB1Q9BZB8 566 aaKnown RBP13.46□□□□□ -0.26
THBS3-202ENST00000428962 EPB41L1Q9H4G0 881 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 SUV39H2Q9H5I1 410 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 UBAP1Q9NZ09 502 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 EGFL7Q9UHF1 273 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 TRPS1Q9UHF7 1281 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 INTS6Q9UL03 887 aaKnown RBP13.46□□□□□ -0.26
THBS3-202ENST00000428962 CLEC4EQ9ULY5 219 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 PDE4DIPQ5VU43 2346 aa13.46□□□□□ -0.26
THBS3-202ENST00000428962 HELZP42694 1942 aaKnown RBP13.45□□□□□ -0.26
THBS3-202ENST00000428962 ARNTLO00327 626 aa13.45□□□□□ -0.26
THBS3-202ENST00000428962 TAPBPO15533 448 aa13.45□□□□□ -0.26
THBS3-202ENST00000428962 KATNA1O75449 491 aa13.45□□□□□ -0.26
THBS3-202ENST00000428962 SMIM18P0DKX4 95 aa13.45□□□□□ -0.26
THBS3-202ENST00000428962 UMPSP11172 480 aa13.45□□□□□ -0.26
THBS3-202ENST00000428962 JAK1P23458 1154 aa13.45□□□□□ -0.26
THBS3-202ENST00000428962 FASP25445 335 aa13.45□□□□□ -0.26
THBS3-202ENST00000428962 DDX6P26196 483 aaKnown RBP eCLIP13.45□□□□□ -0.26
THBS3-202ENST00000428962 CASP2P42575 452 aa13.45□□□□□ -0.26
THBS3-202ENST00000428962 NRF1Q16656 503 aa13.45□□□□□ -0.26
THBS3-202ENST00000428962 AP5B1Q2VPB7 878 aa13.45□□□□□ -0.26
THBS3-202ENST00000428962 C18orf21Q32NC0 220 aaPredicted RBP13.45□□□□□ -0.26
THBS3-202ENST00000428962 PAGE3Q5JUK9 113 aa13.45□□□□□ -0.26
THBS3-202ENST00000428962 INTS11Q5TA45 600 aaKnown RBP13.45□□□□□ -0.26
THBS3-202ENST00000428962 LRRC66Q68CR7 880 aa13.45□□□□□ -0.26
THBS3-202ENST00000428962 HMBOX1Q6NT76 420 aa13.45□□□□□ -0.26
THBS3-202ENST00000428962 ZBTB49Q6ZSB9 765 aa13.45□□□□□ -0.26
THBS3-202ENST00000428962 AMIGO2Q86SJ2 522 aa13.45□□□□□ -0.26
THBS3-202ENST00000428962 TSPAN33Q86UF1 283 aa13.45□□□□□ -0.26
THBS3-202ENST00000428962 ZSWIM9Q86XI8 627 aa13.45□□□□□ -0.26
THBS3-202ENST00000428962 PROSER1Q86XN7 944 aa13.45□□□□□ -0.26
THBS3-202ENST00000428962 CHERPQ8IWX8 916 aaKnown RBP13.45□□□□□ -0.26
THBS3-202ENST00000428962 KREMEN2Q8NCW0 462 aa13.45□□□□□ -0.26
THBS3-202ENST00000428962 GPR26Q8NDV2 337 aa13.45□□□□□ -0.26
THBS3-202ENST00000428962 DNAJB14Q8TBM8 379 aa13.45□□□□□ -0.26
THBS3-202ENST00000428962 RHBDF1Q96CC6 855 aa13.45□□□□□ -0.26
THBS3-202ENST00000428962 CCDC97Q96F63 343 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms