RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 LHX9Q9NQ69 397 aa15.15■□□□□ 0.02
SEC13-210ENST00000428626 SLC24A2Q9UI40 661 aa15.15■□□□□ 0.02
SEC13-210ENST00000428626 PCDHGA6Q9Y5G7 932 aa15.15■□□□□ 0.02
SEC13-210ENST00000428626 MACROD2A1Z1Q3 448 aa15.14■□□□□ 0.01
SEC13-210ENST00000428626 DDX3YO15523 660 aaKnown RBP15.14■□□□□ 0.01
SEC13-210ENST00000428626 KCNN4O15554 427 aa15.14■□□□□ 0.01
SEC13-210ENST00000428626 NTRK1P04629 796 aa15.14■□□□□ 0.01
SEC13-210ENST00000428626 PRSS56P0CW18 603 aa15.14■□□□□ 0.01
SEC13-210ENST00000428626 RBP3P10745 1247 aa15.14■□□□□ 0.01
SEC13-210ENST00000428626 PYGMP11217 842 aa15.14■□□□□ 0.01
SEC13-210ENST00000428626 PTPN7P35236 360 aa15.14■□□□□ 0.01
SEC13-210ENST00000428626 CASRP41180 1078 aa15.14■□□□□ 0.01
SEC13-210ENST00000428626 TNNT3P45378 269 aaPredicted RBP15.14■□□□□ 0.01
SEC13-210ENST00000428626 KPNA2P52292 529 aaKnown RBP15.14■□□□□ 0.01
SEC13-210ENST00000428626 EIF3EP60228 445 aaKnown RBP15.14■□□□□ 0.01
SEC13-210ENST00000428626 COPS2P61201 443 aa15.14■□□□□ 0.01
SEC13-210ENST00000428626 RPS18P62269 152 aaKnown RBP15.14■□□□□ 0.01
SEC13-210ENST00000428626 TMPRSS15P98073 1019 aa15.14■□□□□ 0.01
SEC13-210ENST00000428626 DNASE1L3Q13609 305 aa15.14■□□□□ 0.01
SEC13-210ENST00000428626 LAMB3Q13751 1172 aa15.14■□□□□ 0.01
SEC13-210ENST00000428626 ZNF658BQ4V348 819 aaPredicted RBP15.14■□□□□ 0.01
SEC13-210ENST00000428626 BCL7AQ4VC05 210 aa15.14■□□□□ 0.01
SEC13-210ENST00000428626 DNTTIP2Q5QJE6 756 aaKnown RBP15.14■□□□□ 0.01
SEC13-210ENST00000428626 ITPRIPL1Q6GPH6 555 aa15.14■□□□□ 0.01
SEC13-210ENST00000428626 CAPRIN2Q6IMN6 1127 aaKnown RBP15.14■□□□□ 0.01
SEC13-210ENST00000428626 RAD9BQ6WBX8 426 aa15.14■□□□□ 0.01
SEC13-210ENST00000428626 KLHDC8BQ8IXV7 354 aa15.14■□□□□ 0.01
SEC13-210ENST00000428626 SLC38A9Q8NBW4 561 aa15.14■□□□□ 0.01
SEC13-210ENST00000428626 ZNF514Q96K75 400 aaPredicted RBP15.14■□□□□ 0.01
SEC13-210ENST00000428626 LINC00615Q96LM1 132 aaPredicted RBP15.14■□□□□ 0.01
SEC13-210ENST00000428626 FGF21Q9NSA1 209 aa15.14■□□□□ 0.01
SEC13-210ENST00000428626 HRASLS2Q9NWW9 162 aa15.14■□□□□ 0.01
SEC13-210ENST00000428626 RARRES3Q9UL19 164 aa15.14■□□□□ 0.01
SEC13-210ENST00000428626 PADI1Q9ULC6 663 aa15.14■□□□□ 0.01
SEC13-210ENST00000428626 TP53TG5Q9Y2B4 290 aa15.14■□□□□ 0.01
SEC13-210ENST00000428626 EFR3BQ9Y2G0 817 aa15.14■□□□□ 0.01
SEC13-210ENST00000428626 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.14■□□□□ 0.01
SEC13-210ENST00000428626 EPN1Q9Y6I3 576 aaPredicted RBP15.14■□□□□ 0.01
SEC13-210ENST00000428626 SEC16AO15027 2179 aa15.14■□□□□ 0.01
SEC13-210ENST00000428626 PIKFYVEQ9Y2I7 2098 aa15.13■□□□□ 0.01
SEC13-210ENST00000428626 TNRC6AQ8NDV7 1962 aaKnown RBP15.13■□□□□ 0.01
SEC13-210ENST00000428626 CDC14CA4D256 554 aa15.13■□□□□ 0.01
SEC13-210ENST00000428626 OR6C74A6NCV1 312 aa15.13■□□□□ 0.01
SEC13-210ENST00000428626 C5orf60A6NFR6 353 aa15.13■□□□□ 0.01
SEC13-210ENST00000428626 TLCD2A6NGC4 264 aa15.13■□□□□ 0.01
SEC13-210ENST00000428626 C2orf81A6NN90 581 aa15.13■□□□□ 0.01
SEC13-210ENST00000428626 LDB2O43679 373 aa15.13■□□□□ 0.01
SEC13-210ENST00000428626 CREG1O75629 220 aa15.13■□□□□ 0.01
SEC13-210ENST00000428626 PDGFAP04085 211 aa15.13■□□□□ 0.01
SEC13-210ENST00000428626 POLBP06746 335 aa15.13■□□□□ 0.01
SEC13-210ENST00000428626 CTNNA2P26232 953 aa15.13■□□□□ 0.01
SEC13-210ENST00000428626 PRLHRP49683 370 aa15.13■□□□□ 0.01
SEC13-210ENST00000428626 FOXK1P85037 733 aa15.13■□□□□ 0.01
SEC13-210ENST00000428626 SPA17Q15506 151 aa15.13■□□□□ 0.01
SEC13-210ENST00000428626 GPR19Q15760 415 aa15.13■□□□□ 0.01
SEC13-210ENST00000428626 CCDC181Q5TID7 509 aa15.13■□□□□ 0.01
SEC13-210ENST00000428626 PRAMEF17Q5VTA0 474 aa15.13■□□□□ 0.01
SEC13-210ENST00000428626 CDKL3Q8IVW4 592 aaPredicted RBP15.13■□□□□ 0.01
SEC13-210ENST00000428626 NXPE1Q8N323 547 aa15.13■□□□□ 0.01
SEC13-210ENST00000428626 D2HGDHQ8N465 521 aa15.13■□□□□ 0.01
SEC13-210ENST00000428626 LRRC57Q8N9N7 239 aa15.13■□□□□ 0.01
SEC13-210ENST00000428626 SPATA13Q96N96 652 aa15.13■□□□□ 0.01
SEC13-210ENST00000428626 KIR3DX1Q9H7L2 352 aa15.13■□□□□ 0.01
SEC13-210ENST00000428626 PDE7BQ9NP56 450 aa15.13■□□□□ 0.01
SEC13-210ENST00000428626 ANAPC2Q9UJX6 822 aa15.13■□□□□ 0.01
SEC13-210ENST00000428626 ACSL5Q9ULC5 683 aa15.13■□□□□ 0.01
SEC13-210ENST00000428626 USP9XQ93008 2570 aaPredicted RBP15.13■□□□□ 0.01
SEC13-210ENST00000428626 A0A0U1RQJ8 604 aa15.12■□□□□ 0.01
SEC13-210ENST00000428626 GRID2IPA4D2P6 1211 aa15.12■□□□□ 0.01
SEC13-210ENST00000428626 DNAJB5O75953 348 aa15.12■□□□□ 0.01
SEC13-210ENST00000428626 CYLC1P35663 651 aaPredicted RBP15.12■□□□□ 0.01
SEC13-210ENST00000428626 LACTB2Q53H82 288 aaPredicted RBP15.12■□□□□ 0.01
SEC13-210ENST00000428626 KCTD11Q693B1 232 aa15.12■□□□□ 0.01
SEC13-210ENST00000428626 LCN10Q6JVE6 187 aa15.12■□□□□ 0.01
SEC13-210ENST00000428626 DARS2Q6PI48 645 aaKnown RBP15.12■□□□□ 0.01
SEC13-210ENST00000428626 CFAP206Q8IYR0 622 aa15.12■□□□□ 0.01
SEC13-210ENST00000428626 ACRBPQ8NEB7 543 aa15.12■□□□□ 0.01
SEC13-210ENST00000428626 ZNF501Q96CX3 271 aaPredicted RBP15.12■□□□□ 0.01
SEC13-210ENST00000428626 DNAJC1Q96KC8 554 aaKnown RBP15.12■□□□□ 0.01
SEC13-210ENST00000428626 TBL1YQ9BQ87 522 aa15.12■□□□□ 0.01
SEC13-210ENST00000428626 TRIM55Q9BYV6 548 aa15.12■□□□□ 0.01
SEC13-210ENST00000428626 TWSG1Q9GZX9 223 aa15.12■□□□□ 0.01
SEC13-210ENST00000428626 ACTL8Q9H568 366 aa15.12■□□□□ 0.01
SEC13-210ENST00000428626 ARNT2Q9HBZ2 717 aa15.12■□□□□ 0.01
SEC13-210ENST00000428626 CRLS1Q9UJA2 301 aa15.12■□□□□ 0.01
SEC13-210ENST00000428626 KCND3Q9UK17 655 aa15.12■□□□□ 0.01
SEC13-210ENST00000428626 POLHQ9Y253 713 aa15.12■□□□□ 0.01
SEC13-210ENST00000428626 AAR2Q9Y312 384 aaKnown RBP15.12■□□□□ 0.01
SEC13-210ENST00000428626 PCDHB3Q9Y5E6 796 aa15.12■□□□□ 0.01
SEC13-210ENST00000428626 IGLV3-16A0A075B6K0 115 aa15.11■□□□□ 0.01
SEC13-210ENST00000428626 UBA6A0AVT1 1052 aaPredicted RBP15.11■□□□□ 0.01
SEC13-210ENST00000428626 PIPSLA2A3N6 862 aa15.11■□□□□ 0.01
SEC13-210ENST00000428626 METTL18O95568 372 aa15.11■□□□□ 0.01
SEC13-210ENST00000428626 SLC35G4P0C7Q5 338 aa15.11■□□□□ 0.01
SEC13-210ENST00000428626 CCNYL3P0C7X3 344 aa15.11■□□□□ 0.01
SEC13-210ENST00000428626 POLR2CP19387 275 aaPredicted RBP15.11■□□□□ 0.01
SEC13-210ENST00000428626 PDHA2P29803 388 aa15.11■□□□□ 0.01
SEC13-210ENST00000428626 ZNF75DP51815 510 aa15.11■□□□□ 0.01
SEC13-210ENST00000428626 RWDD2BP57060 319 aa15.11■□□□□ 0.01
SEC13-210ENST00000428626 HSD11B2P80365 405 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms