RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 C2orf73Q8N5S3 287 aaPredicted RBP6.88□□□□□ -1.31
CDC7-203ENST00000428239 ARL10Q8N8L6 244 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 PHC3Q8NDX5 983 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 OR4C6Q8NH72 309 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 SLC37A2Q8TED4 501 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 NCSTNQ92542 709 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 NAT6Q93015 286 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 TIMM29Q9BSF4 260 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 COG4Q9H9E3 785 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 RDH14Q9HBH5 336 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 ZDHHC18Q9NUE0 388 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 KCNK4Q9NYG8 393 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 UTP6Q9NYH9 597 aaKnown RBP6.88□□□□□ -1.31
CDC7-203ENST00000428239 NLGN3Q9NZ94 848 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 ACSL5Q9ULC5 683 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 COLEC10Q9Y6Z7 277 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 PCDHGA12O60330 932 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 KDM1AO60341 852 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 RPN2P04844 631 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 HIST1H2AGP0C0S8 130 aaPredicted RBP6.88□□□□□ -1.31
CDC7-203ENST00000428239 JUPP14923 745 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 HIST1H2ADP20671 130 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 ARNTP27540 789 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 TYK2P29597 1187 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 MAGEA3P43357 314 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 PRLHRP49683 370 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 SLC14A1Q13336 389 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 TAF1BQ53T94 588 aaPredicted RBP6.88□□□□□ -1.31
CDC7-203ENST00000428239 C6orf132Q5T0Z8 1188 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 PHF19Q5T6S3 580 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 KIAA0408Q6ZU52 694 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 TRMT10CQ7L0Y3 403 aaKnown RBP6.88□□□□□ -1.31
CDC7-203ENST00000428239 TBC1D1Q86TI0 1168 aaPredicted RBP6.88□□□□□ -1.31
CDC7-203ENST00000428239 SLC35F3Q8IY50 421 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 CPNE9Q8IYJ1 553 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 ZBTB2Q8N680 514 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 GOLGA6L1Q8N7Z2 621 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 IFI44Q8TCB0 444 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 TFGQ92734 400 aaPredicted RBP6.88□□□□□ -1.31
CDC7-203ENST00000428239 N4BP2L2Q92802 583 aaPredicted RBP6.88□□□□□ -1.31
CDC7-203ENST00000428239 TSPAN17Q96FV3 270 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 SCYL1Q96KG9 808 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 HIST1H2AHQ96KK5 128 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 HIST1H2AJQ99878 128 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 EGFL8Q99944 293 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 H2AFJQ9BTM1 129 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 GPAMQ9HCL2 828 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 DNAAF2Q9NVR5 837 aaKnown RBP6.88□□□□□ -1.31
CDC7-203ENST00000428239 PNMA8BQ9ULN7 279 aaPredicted RBP6.88□□□□□ -1.31
CDC7-203ENST00000428239 PCYT1BQ9Y5K3 369 aaPredicted RBP6.88□□□□□ -1.31
CDC7-203ENST00000428239 EML5Q05BV3 1969 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 OR5K4A6NMS3 321 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 A8MU76 341 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 LIN7AO14910 233 aaPredicted RBP6.88□□□□□ -1.31
CDC7-203ENST00000428239 PHGDHO43175 533 aaKnown RBP6.88□□□□□ -1.31
CDC7-203ENST00000428239 FAM155BO75949 473 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 KRT37O76014 449 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 KRT38O76015 456 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 S1PR4O95977 384 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 AHSGP02765 367 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 TUBBP07437 444 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 ARCN1P48444 511 aaKnown RBP6.88□□□□□ -1.31
CDC7-203ENST00000428239 B4GALNT1Q00973 533 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 ACVR1Q04771 509 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 SPIDRQ14159 915 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 SLC29A2Q14542 456 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 C14orf28Q4W4Y0 310 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 RBM20Q5T481 1227 aaKnown RBP6.88□□□□□ -1.31
CDC7-203ENST00000428239 TEDDM1Q5T9Z0 273 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 IRGCQ6NXR0 463 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 GUSBP11Q6P575 273 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 DHRS13Q6UX07 377 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 CCNI2Q6ZMN8 369 aaPredicted RBP6.88□□□□□ -1.31
CDC7-203ENST00000428239 PIM3Q86V86 326 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 ZNF547Q8IVP9 402 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 OR2L2Q8NH16 312 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 LCN9Q8WX39 176 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 LPGAT1Q92604 370 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 CPNE1Q99829 537 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 TRIM54Q9BYV2 358 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 ANKZF1Q9H8Y5 726 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 NCKIPSDQ9NZQ3 722 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 CPNE7Q9UBL6 633 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 VWA7Q9Y334 891 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 PSAT1Q9Y617 370 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 CSNK1G3Q9Y6M4 447 aa6.88□□□□□ -1.31
CDC7-203ENST00000428239 GOLGA6L10A6NI86 522 aa6.87□□□□□ -1.31
CDC7-203ENST00000428239 E7ESA3 106 aa6.87□□□□□ -1.31
CDC7-203ENST00000428239 MAP3K7O43318 606 aa6.87□□□□□ -1.31
CDC7-203ENST00000428239 CATP04040 527 aaKnown RBP6.87□□□□□ -1.31
CDC7-203ENST00000428239 GSTA2P09210 222 aa6.87□□□□□ -1.31
CDC7-203ENST00000428239 MYBL2P10244 700 aa6.87□□□□□ -1.31
CDC7-203ENST00000428239 C7P10643 843 aa6.87□□□□□ -1.31
CDC7-203ENST00000428239 STMN1P16949 149 aa6.87□□□□□ -1.31
CDC7-203ENST00000428239 CKMT2P17540 419 aa6.87□□□□□ -1.31
CDC7-203ENST00000428239 MPSTP25325 297 aa6.87□□□□□ -1.31
CDC7-203ENST00000428239 PDHA2P29803 388 aa6.87□□□□□ -1.31
CDC7-203ENST00000428239 ID4P47928 161 aa6.87□□□□□ -1.31
CDC7-203ENST00000428239 IL2P60568 153 aa6.87□□□□□ -1.31
CDC7-203ENST00000428239 FOXC1Q12948 553 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms