RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 CYP8B1Q9UNU6 501 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 FAM208AQ9UK61 1670 aaKnown RBP9.6□□□□□ -0.87
SNX13-203ENST00000428135 MYOCOSA0A1B0GUC4 107 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 DHRS12A0PJE2 317 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 FAM149AA5PLN7 773 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 PIP5K1BO14986 540 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 GBAP04062 536 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 GIMD1P0DJR0 217 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 HNRNPH3P31942 346 aaKnown RBP9.6□□□□□ -0.87
SNX13-203ENST00000428135 MLLT3P42568 568 aaPredicted RBP9.6□□□□□ -0.87
SNX13-203ENST00000428135 TNK2Q07912 1038 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 SIRPB2Q5JXA9 342 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 FAM156AQ8NDB6 213 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 OR2T12Q8NG77 320 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 FCRL4Q96PJ5 515 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 SIX2Q9NPC8 291 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 RCOR3Q9P2K3 495 aaPredicted RBP9.6□□□□□ -0.87
SNX13-203ENST00000428135 NCDNQ9UBB6 729 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 PPM1HQ9ULR3 514 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 KCTD3Q9Y597 815 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 A0A0D9SEW6 157 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 GJB5O95377 273 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 TOP3AQ13472 1001 aaPredicted RBP9.6□□□□□ -0.87
SNX13-203ENST00000428135 TAF1AQ15573 450 aaPredicted RBP9.6□□□□□ -0.87
SNX13-203ENST00000428135 HKDC1Q2TB90 917 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 ZNF542PQ5EBM4 170 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 SMYD5Q6GMV2 418 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 ZFP1Q6P2D0 407 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 ARCQ7LC44 396 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 CELF5Q8N6W0 485 aaKnown RBP9.6□□□□□ -0.87
SNX13-203ENST00000428135 BATF3Q9NR55 127 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 WASF2Q9Y6W5 498 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 hCG_2039718K7EN88 272 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 LEFTY2O00292 366 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 CPN2P22792 545 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 C16orf72Q14CZ0 275 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 KCTD21Q4G0X4 260 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 TNFAIP8L2Q6P589 184 aaPredicted RBP9.6□□□□□ -0.87
SNX13-203ENST00000428135 CLDN19Q8N6F1 224 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 DNAJA3Q96EY1 480 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 SAR1AQ9NR31 198 aa9.6□□□□□ -0.87
SNX13-203ENST00000428135 GLI3P10071 1580 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 A8MUI8 341 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 KHNYNO15037 678 aaKnown RBP9.59□□□□□ -0.87
SNX13-203ENST00000428135 TMED10P49755 219 aaKnown RBP9.59□□□□□ -0.87
SNX13-203ENST00000428135 RDH11Q8TC12 318 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 STK32AQ8WU08 396 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 ADAP2Q9NPF8 381 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 EHD3Q9NZN3 535 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 PLIN4Q96Q06 1357 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 MTMR11A4FU01 709 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 LAMP2P13473 410 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 TPP2P29144 1249 aaPredicted RBP9.59□□□□□ -0.87
SNX13-203ENST00000428135 CRHR1P34998 444 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 RNF144AP50876 292 aaPredicted RBP9.59□□□□□ -0.87
SNX13-203ENST00000428135 ELF3P78545 371 aaPredicted RBP9.59□□□□□ -0.87
SNX13-203ENST00000428135 HNRNPDQ14103 355 aaKnown RBP9.59□□□□□ -0.87
SNX13-203ENST00000428135 NR1D2Q14995 579 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 SLC25A24Q6NUK1 477 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 RPS27LQ71UM5 84 aaKnown RBP9.59□□□□□ -0.87
SNX13-203ENST00000428135 HPS6Q86YV9 775 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 ZCCHC7Q8N3Z6 543 aaKnown RBP9.59□□□□□ -0.87
SNX13-203ENST00000428135 OR10H5Q8NGA6 315 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 C2orf15Q8WU43 125 aaKnown RBP9.59□□□□□ -0.87
SNX13-203ENST00000428135 PIH1D2Q8WWB5 315 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 RBCK1Q9BYM8 510 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 BTBD1Q9H0C5 482 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 ST6GALNAC4Q9H4F1 302 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 CNTN3Q9P232 1028 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 BTAF1O14981 1849 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 G3V2T6 193 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 SERPINA6P08185 405 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 CHRM5P08912 532 aaPredicted RBP9.59□□□□□ -0.87
SNX13-203ENST00000428135 MYCLP1P12525 358 aaPredicted RBP9.59□□□□□ -0.87
SNX13-203ENST00000428135 TAS2R39P59534 338 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 ILF2Q12905 390 aaKnown RBP9.59□□□□□ -0.87
SNX13-203ENST00000428135 KIAA0408Q6ZU52 694 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 RP9Q8TA86 221 aaKnown RBP9.59□□□□□ -0.87
SNX13-203ENST00000428135 SORCS1Q8WY21 1168 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 CXorf56Q9H5V9 222 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 CORO2BQ9UQ03 480 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 UNGP13051 313 aaPredicted RBP9.59□□□□□ -0.87
SNX13-203ENST00000428135 ITGA2P17301 1181 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.59□□□□□ -0.87
SNX13-203ENST00000428135 SIM2Q14190 667 aaPredicted RBP9.59□□□□□ -0.87
SNX13-203ENST00000428135 LPCAT4Q643R3 524 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 PAQR3Q6TCH7 311 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 CERS6Q6ZMG9 384 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 OR5AK3PQ8NH89 298 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 GTPBP3Q969Y2 492 aaKnown RBP9.59□□□□□ -0.87
SNX13-203ENST00000428135 FUBP3Q96I24 572 aaKnown RBP eCLIP9.59□□□□□ -0.87
SNX13-203ENST00000428135 GPR62Q9BZJ7 368 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 NUAK2Q9H093 628 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 DMAC2Q9NW81 257 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 COPS7AQ9UBW8 275 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 MYH2Q9UKX2 1941 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 BIRC5O15392 142 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 SIX3O95343 332 aaPredicted RBP9.59□□□□□ -0.87
SNX13-203ENST00000428135 F2P00734 622 aa9.59□□□□□ -0.87
SNX13-203ENST00000428135 CHRNA1P02708 482 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms