RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 TRBV5-4A0A0C4DH59 114 aa18■□□□□ 0.47
GPC1-205ENST00000427506 C17orf113A0A1B0GUU1 675 aa18■□□□□ 0.47
GPC1-205ENST00000427506 STK17BO94768 372 aa18■□□□□ 0.47
GPC1-205ENST00000427506 ETS1P14921 441 aa18■□□□□ 0.47
GPC1-205ENST00000427506 LIFP15018 202 aa18■□□□□ 0.47
GPC1-205ENST00000427506 WT1P19544 449 aaPredicted RBP18■□□□□ 0.47
GPC1-205ENST00000427506 MSNP26038 577 aaKnown RBP18■□□□□ 0.47
GPC1-205ENST00000427506 MAP4P27816 1152 aaKnown RBP18■□□□□ 0.47
GPC1-205ENST00000427506 SH3BP2P78314 561 aa18■□□□□ 0.47
GPC1-205ENST00000427506 LAMB3Q13751 1172 aa18■□□□□ 0.47
GPC1-205ENST00000427506 ARMC6Q6NXE6 501 aa18■□□□□ 0.47
GPC1-205ENST00000427506 ZNF662Q6ZS27 426 aa18■□□□□ 0.47
GPC1-205ENST00000427506 LILRA3Q8N6C8 439 aaPredicted RBP18■□□□□ 0.47
GPC1-205ENST00000427506 TRIM58Q8NG06 486 aa18■□□□□ 0.47
GPC1-205ENST00000427506 ELMO2Q96JJ3 720 aa18■□□□□ 0.47
GPC1-205ENST00000427506 OR6C1Q96RD1 312 aa18■□□□□ 0.47
GPC1-205ENST00000427506 SIDT1Q9NXL6 827 aaKnown RBP18■□□□□ 0.47
GPC1-205ENST00000427506 SMARCAL1Q9NZC9 954 aa18■□□□□ 0.47
GPC1-205ENST00000427506 PAK5Q9P286 719 aa18■□□□□ 0.47
GPC1-205ENST00000427506 HEBP2Q9Y5Z4 205 aa18■□□□□ 0.47
GPC1-205ENST00000427506 IGLV3-16A0A075B6K0 115 aa17.99■□□□□ 0.47
GPC1-205ENST00000427506 HEATR9A2RTY3 570 aa17.99■□□□□ 0.47
GPC1-205ENST00000427506 MROH6A6NGR9 719 aa17.99■□□□□ 0.47
GPC1-205ENST00000427506 C1QL1O75973 258 aa17.99■□□□□ 0.47
GPC1-205ENST00000427506 ARL4DP49703 201 aa17.99■□□□□ 0.47
GPC1-205ENST00000427506 PPP1CAP62136 330 aa17.99■□□□□ 0.47
GPC1-205ENST00000427506 CYP4F2P78329 520 aa17.99■□□□□ 0.47
GPC1-205ENST00000427506 CCNG2Q16589 344 aa17.99■□□□□ 0.47
GPC1-205ENST00000427506 DBN1Q16643 649 aa17.99■□□□□ 0.47
GPC1-205ENST00000427506 DNTTIP2Q5QJE6 756 aaKnown RBP17.99■□□□□ 0.47
GPC1-205ENST00000427506 GSTA5Q7RTV2 222 aa17.99■□□□□ 0.47
GPC1-205ENST00000427506 OOSP2Q86WS3 158 aa17.99■□□□□ 0.47
GPC1-205ENST00000427506 RASGRP3Q8IV61 690 aa17.99■□□□□ 0.47
GPC1-205ENST00000427506 PIANPQ8IYJ0 282 aa17.99■□□□□ 0.47
GPC1-205ENST00000427506 CLDN19Q8N6F1 224 aa17.99■□□□□ 0.47
GPC1-205ENST00000427506 ZFPM2Q8WW38 1151 aa17.99■□□□□ 0.47
GPC1-205ENST00000427506 MAIP1Q8WWC4 291 aa17.99■□□□□ 0.47
GPC1-205ENST00000427506 KLHL6Q8WZ60 621 aa17.99■□□□□ 0.47
GPC1-205ENST00000427506 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.99■□□□□ 0.47
GPC1-205ENST00000427506 KIAA1143Q96AT1 154 aaPredicted RBP17.99■□□□□ 0.47
GPC1-205ENST00000427506 RMDN2Q96LZ7 410 aa17.99■□□□□ 0.47
GPC1-205ENST00000427506 ULBP3Q9BZM4 244 aa17.99■□□□□ 0.47
GPC1-205ENST00000427506 TRIT1Q9H3H1 467 aaKnown RBP17.99■□□□□ 0.47
GPC1-205ENST00000427506 COG4Q9H9E3 785 aa17.99■□□□□ 0.47
GPC1-205ENST00000427506 HRASLS2Q9NWW9 162 aa17.99■□□□□ 0.47
GPC1-205ENST00000427506 SLC24A2Q9UI40 661 aa17.99■□□□□ 0.47
GPC1-205ENST00000427506 SDK2Q58EX2 2172 aa17.98■□□□□ 0.47
GPC1-205ENST00000427506 LOC400499M0QZD8 3231 aa17.98■□□□□ 0.47
GPC1-205ENST00000427506 UBA6A0AVT1 1052 aaPredicted RBP17.98■□□□□ 0.47
GPC1-205ENST00000427506 OR6C74A6NCV1 312 aa17.98■□□□□ 0.47
GPC1-205ENST00000427506 OR5K3A6NET4 321 aa17.98■□□□□ 0.47
GPC1-205ENST00000427506 OR51F1A6NGY5 319 aa17.98■□□□□ 0.47
GPC1-205ENST00000427506 IFRD1O00458 451 aaPredicted RBP17.98■□□□□ 0.47
GPC1-205ENST00000427506 SUN1O94901 812 aa17.98■□□□□ 0.47
GPC1-205ENST00000427506 FGGP02679 453 aa17.98■□□□□ 0.47
GPC1-205ENST00000427506 APRTP07741 180 aa17.98■□□□□ 0.47
GPC1-205ENST00000427506 NDUFS1P28331 727 aa17.98■□□□□ 0.47
GPC1-205ENST00000427506 GRIA1P42261 906 aa17.98■□□□□ 0.47
GPC1-205ENST00000427506 CCZ1BP86790 482 aa17.98■□□□□ 0.47
GPC1-205ENST00000427506 CCZ1P86791 482 aaPredicted RBP17.98■□□□□ 0.47
GPC1-205ENST00000427506 SEMA5AQ13591 1074 aa17.98■□□□□ 0.47
GPC1-205ENST00000427506 IL11RAQ14626 422 aa17.98■□□□□ 0.47
GPC1-205ENST00000427506 CAPRIN2Q6IMN6 1127 aaKnown RBP17.98■□□□□ 0.47
GPC1-205ENST00000427506 CYB5D1Q6P9G0 228 aa17.98■□□□□ 0.47
GPC1-205ENST00000427506 TIPARPQ7Z3E1 657 aaKnown RBP17.98■□□□□ 0.47
GPC1-205ENST00000427506 SIDT2Q8NBJ9 832 aaKnown RBP17.98■□□□□ 0.47
GPC1-205ENST00000427506 UBXN4Q92575 508 aa17.98■□□□□ 0.47
GPC1-205ENST00000427506 EXTL1Q92935 676 aa17.98■□□□□ 0.47
GPC1-205ENST00000427506 RNF31Q96EP0 1072 aa17.98■□□□□ 0.47
GPC1-205ENST00000427506 FERD3LQ96RJ6 166 aa17.98■□□□□ 0.47
GPC1-205ENST00000427506 SPRY4Q9C004 299 aa17.98■□□□□ 0.47
GPC1-205ENST00000427506 KIR3DX1Q9H7L2 352 aa17.98■□□□□ 0.47
GPC1-205ENST00000427506 GPN2Q9H9Y4 310 aaPredicted RBP17.98■□□□□ 0.47
GPC1-205ENST00000427506 TMEM184BQ9Y519 407 aaPredicted RBP17.98■□□□□ 0.47
GPC1-205ENST00000427506 IGHV5-51A0A0C4DH38 117 aa17.97■□□□□ 0.47
GPC1-205ENST00000427506 CCDC162PA2VCL2 907 aa17.97■□□□□ 0.47
GPC1-205ENST00000427506 CEP104O60308 925 aa17.97■□□□□ 0.47
GPC1-205ENST00000427506 AP2A2O94973 939 aa17.97■□□□□ 0.47
GPC1-205ENST00000427506 ITGB2P05107 769 aa17.97■□□□□ 0.47
GPC1-205ENST00000427506 ZSCAN5DPP0CG00 497 aa17.97■□□□□ 0.47
GPC1-205ENST00000427506 NELFEP18615 380 aaKnown RBP17.97■□□□□ 0.47
GPC1-205ENST00000427506 ADRA1DP25100 572 aa17.97■□□□□ 0.47
GPC1-205ENST00000427506 RPL22P35268 128 aaKnown RBP17.97■□□□□ 0.47
GPC1-205ENST00000427506 NSG1P42857 185 aa17.97■□□□□ 0.47
GPC1-205ENST00000427506 XKR5Q6UX68 686 aa17.97■□□□□ 0.47
GPC1-205ENST00000427506 UNC5BQ8IZJ1 945 aa17.97■□□□□ 0.47
GPC1-205ENST00000427506 ZNF843Q8N446 348 aa17.97■□□□□ 0.47
GPC1-205ENST00000427506 GLIS1Q8NBF1 620 aa17.97■□□□□ 0.47
GPC1-205ENST00000427506 HDAC10Q969S8 669 aa17.97■□□□□ 0.47
GPC1-205ENST00000427506 MED8Q96G25 268 aa17.97■□□□□ 0.47
GPC1-205ENST00000427506 TTC1Q99614 292 aa17.97■□□□□ 0.47
GPC1-205ENST00000427506 MAP3K3Q99759 626 aa17.97■□□□□ 0.47
GPC1-205ENST00000427506 EFHD1Q9BUP0 239 aa17.97■□□□□ 0.47
GPC1-205ENST00000427506 TLR10Q9BXR5 811 aa17.97■□□□□ 0.47
GPC1-205ENST00000427506 PDE7BQ9NP56 450 aa17.97■□□□□ 0.47
GPC1-205ENST00000427506 ZKSCAN5Q9Y2L8 839 aa17.97■□□□□ 0.47
GPC1-205ENST00000427506 PPP2R2CQ9Y2T4 447 aa17.97■□□□□ 0.47
GPC1-205ENST00000427506 AHCTF1Q8WYP5 2266 aa17.96■□□□□ 0.47
GPC1-205ENST00000427506 LOC101059948A0A1B0GTJ6 334 aa17.96■□□□□ 0.47
GPC1-205ENST00000427506 QSOX1O00391 747 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms