RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 NKIRAS1Q9NYS0 192 aa5.09□□□□□ -1.59
LINC00458-202ENST00000427299 SELENONQ9NZV5 590 aa5.09□□□□□ -1.59
LINC00458-202ENST00000427299 POLLQ9UGP5 575 aa5.09□□□□□ -1.59
LINC00458-202ENST00000427299 ASIC3Q9UHC3 531 aa5.09□□□□□ -1.59
LINC00458-202ENST00000427299 KCND3Q9UK17 655 aa5.09□□□□□ -1.59
LINC00458-202ENST00000427299 EMSYQ7Z589 1322 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 LCTP09848 1927 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 SLC22A23A1A5C7 686 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 CCT8L1PA6NM43 557 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 C16orf96A6NNT2 1141 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 F5H6K3 240 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 LIN7AO14910 233 aaPredicted RBP5.08□□□□□ -1.6
LINC00458-202ENST00000427299 ATP2A1O14983 1001 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 CLIC2O15247 247 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 TGFB1I1O43294 461 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 CHMP2AO43633 222 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 LYPLA2O95372 231 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 CYP1A2P05177 515 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 VIMP08670 466 aaKnown RBP5.08□□□□□ -1.6
LINC00458-202ENST00000427299 CNPP09543 421 aaKnown RBP5.08□□□□□ -1.6
LINC00458-202ENST00000427299 TRIM49P0CI25 452 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 TRIM49CP0CI26 452 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 HOXB2P14652 356 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 SFNP31947 248 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 HOXD13P35453 343 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 COILP38432 576 aaPredicted RBP5.08□□□□□ -1.6
LINC00458-202ENST00000427299 CASP4P49662 377 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 RASSF2P50749 326 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 PAPOLAP51003 745 aaKnown RBP5.08□□□□□ -1.6
LINC00458-202ENST00000427299 CCR5P51681 352 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 PGGT1BP53609 377 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 NR1H2P55055 460 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 SLC8A3P57103 927 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 PTP4A2Q12974 167 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 DMP1Q13316 513 aaPredicted RBP5.08□□□□□ -1.6
LINC00458-202ENST00000427299 ACVR2BQ13705 512 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 P3H1Q32P28 736 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 CBWD6Q4V339 395 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 CBWD3Q5JTY5 395 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 CBWD5Q5RIA9 395 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 WLSQ5T9L3 541 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 LIN9Q5TKA1 542 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 KRT39Q6A163 491 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 DGAT2L7PQ6IED9 249 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 BBS12Q6ZW61 710 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 ZNF720Q7Z2F6 126 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 MIER3Q7Z3K6 550 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 SLC13A5Q86YT5 568 aaPredicted RBP5.08□□□□□ -1.6
LINC00458-202ENST00000427299 APLFQ8IW19 511 aaPredicted RBP5.08□□□□□ -1.6
LINC00458-202ENST00000427299 FAM71DQ8N9W8 422 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 CFAP61Q8NHU2 1237 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 SHC3Q92529 594 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 CENPIQ92674 756 aaPredicted RBP5.08□□□□□ -1.6
LINC00458-202ENST00000427299 HTRA1Q92743 480 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 ART4Q93070 314 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 ZKSCAN4Q969J2 545 aaPredicted RBP5.08□□□□□ -1.6
LINC00458-202ENST00000427299 RBM41Q96IZ5 413 aaKnown RBP5.08□□□□□ -1.6
LINC00458-202ENST00000427299 ZNF317Q96PQ6 595 aaPredicted RBP5.08□□□□□ -1.6
LINC00458-202ENST00000427299 TWNKQ96RR1 684 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 BARD1Q99728 777 aaKnown RBP5.08□□□□□ -1.6
LINC00458-202ENST00000427299 HSD17B14Q9BPX1 270 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 CHCHD6Q9BRQ6 235 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 NUP85Q9BW27 656 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 TRIM31Q9BZY9 425 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 GPR88Q9GZN0 384 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 RANBP17Q9H2T7 1088 aaKnown RBP5.08□□□□□ -1.6
LINC00458-202ENST00000427299 GOLPH3Q9H4A6 298 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 CDCP1Q9H5V8 836 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 CXorf56Q9H5V9 222 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 AZI2Q9H6S1 392 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 LRRC19Q9H756 370 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 DNAJC18Q9H819 358 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 PLEKHA5Q9HAU0 1116 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 VEZTQ9HBM0 779 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 MRPL47Q9HD33 250 aaKnown RBP5.08□□□□□ -1.6
LINC00458-202ENST00000427299 DECR2Q9NUI1 292 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 FBXO28Q9NVF7 368 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 ARL8BQ9NVJ2 186 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 HAUS2Q9NVX0 235 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 TMEM160Q9NX00 188 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 GRHL1Q9NZI5 618 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 LGALS13Q9UHV8 139 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 COG5Q9UP83 839 aa5.08□□□□□ -1.6
LINC00458-202ENST00000427299 CITO14578 2027 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 PTPRFP10586 1907 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 NFASCO94856 1347 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 A0A0G2JK05 382 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 TMEM272A0A1B0GTI8 110 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 GSTTP1A0A1W2PQM5 241 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 MBD3L5A6NJ08 208 aaPredicted RBP5.07□□□□□ -1.6
LINC00458-202ENST00000427299 TMEM110-MUSTN1A8MSY1 372 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 E7ENQ6 273 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 MGRN1O60291 552 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 SNX3O60493 162 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 DCTN3O75935 186 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 ATP6V1G2O95670 118 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 OAS1P00973 400 aaKnown RBP5.07□□□□□ -1.6
LINC00458-202ENST00000427299 DLATP10515 647 aaKnown RBP5.07□□□□□ -1.6
LINC00458-202ENST00000427299 IGFBP2P18065 325 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 MATN1P21941 496 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms