RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 SLC38A8A6NNN8 435 aa17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 PEX10O60683 326 aa17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 METTL18O95568 372 aa17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 ANGPTL1O95841 491 aa17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 MAT2AP31153 395 aaKnown RBP17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 GNALP38405 381 aa17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 ILF3Q12906 894 aaKnown RBP eCLIP17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 RNF19BQ6ZMZ0 732 aa17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 RANBP3LQ86VV4 465 aaPredicted RBP17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 ECHDC2Q86YB7 292 aa17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 SPOCK2Q92563 424 aa17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 PNPLA8Q9NP80 782 aa17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 CORO1CQ9ULV4 474 aaPredicted RBP17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 MAFBQ9Y5Q3 323 aaPredicted RBP17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 EFNA1P20827 205 aaPredicted RBP17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 ATXN7L2Q5T6C5 722 aaPredicted RBP17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 MFSD5Q6N075 450 aa17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 FBXO15Q8NCQ5 510 aaPredicted RBP17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 PMM1Q92871 262 aa17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 PHF12Q96QT6 1004 aa17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 PLEKHA1Q9HB21 404 aa17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 ALKBH4Q9NXW9 302 aa17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 LRRC72A6NJI9 287 aa17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 DBIP07108 87 aaKnown RBP17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 POU2F1P14859 743 aa17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 PTPN2P17706 415 aa17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 PBX3P40426 434 aa17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 JAM2P57087 298 aa17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 SWI5Q1ZZU3 235 aa17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 XKR4Q5GH76 650 aa17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 LRTOMTQ8WZ04 291 aa17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 RPL10LQ96L21 214 aaKnown RBP17.73■□□□□ 0.43
ARHGEF28-203ENST00000426542 SLC30A4O14863 429 aa17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 SEPT4O43236 478 aa17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 LCA5LO95447 670 aa17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 LDOC1O95751 146 aaPredicted RBP17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 PSMA1P25786 263 aaKnown RBP17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 PRR5P85299 388 aa17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 ULK3Q6PHR2 472 aa17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 NKD2Q969F2 451 aaPredicted RBP17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 RBM18Q96H35 190 aaKnown RBP17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 RGS20O76081 388 aa17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 RPS9P46781 194 aaKnown RBP17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 ATXN1P54253 815 aaKnown RBP17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 VARS2Q5ST30 1063 aaKnown RBP17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 HGSNATQ68CP4 663 aa17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 CPNE9Q8IYJ1 553 aa17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 HERVK_113Q902F9 699 aa17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 ZNF570Q96NI8 536 aa17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 ADGRB1O14514 1584 aa17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 TMEM88BA6NKF7 163 aa17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 MAGEB17A8MXT2 336 aa17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 ASLP04424 464 aa17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 DDX6P26196 483 aaKnown RBP eCLIP17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 AP1S1P61966 158 aa17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 VITQ6UXI7 678 aa17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 OR10A6Q8NH74 314 aa17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 POLR3BQ9NW08 1133 aaPredicted RBP17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 PHF24Q9UPV7 400 aa17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 ATRNO75882 1429 aa17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 IDH3AP50213 366 aa17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 MC1RQ01726 317 aa17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 SMU1Q2TAY7 513 aa17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 MSL3Q8N5Y2 521 aaKnown RBP17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 CHMP1AQ9HD42 196 aaPredicted RBP17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 KIDINS220Q9ULH0 1771 aa17.72■□□□□ 0.43
ARHGEF28-203ENST00000426542 PSMD9O00233 223 aa17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 KERAO60938 352 aa17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 C8GP07360 202 aa17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 PDHA2P29803 388 aa17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 SEPHS1P49903 392 aa17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 CBFA2T3O75081 653 aa17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 SMPD1P17405 629 aa17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 RPL17P18621 184 aaKnown RBP17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 ALDH4A1P30038 563 aa17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 VBP1P61758 197 aa17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 IL10RBQ08334 325 aa17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 TAF1AQ15573 450 aaPredicted RBP17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 SMARCD3Q6STE5 483 aa17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 PRSS55Q6UWB4 352 aaPredicted RBP17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 GALNT7Q86SF2 657 aa17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 GJD3Q8N144 294 aa17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 SETD6Q8TBK2 473 aa17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 RASSF5Q8WWW0 418 aa17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 SRMSQ9H3Y6 488 aa17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 MARCH7Q9H992 704 aa17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 NME6O75414 186 aaPredicted RBP17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 SCELO95171 688 aa17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 LMO2P25791 158 aa17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 LRRC73Q5JTD7 316 aa17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 PLET1Q6UQ28 207 aa17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 KCNS3Q9BQ31 491 aa17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 TRPV5Q9NQA5 729 aa17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 COPS7AQ9UBW8 275 aa17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 FBXW11Q9UKB1 542 aa17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 ZNF432O94892 652 aa17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 DGKGP49619 791 aa17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 ROR2Q01974 943 aaKnown RBP17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 IRF2BP1Q8IU81 584 aa17.71■□□□□ 0.43
ARHGEF28-203ENST00000426542 PHC3Q8NDX5 983 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms