RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 CDKL1Q00532 357 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 SP140Q13342 867 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 UBAP2LQ14157 1087 aaKnown RBP14.92□□□□□ -0.02
ACTB-204ENST00000425660 STARD3Q14849 445 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 PON2Q15165 354 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 ZNF658BQ4V348 819 aaPredicted RBP14.92□□□□□ -0.02
ACTB-204ENST00000425660 BCL7AQ4VC05 210 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 ZNF648Q5T619 568 aaPredicted RBP14.92□□□□□ -0.02
ACTB-204ENST00000425660 KANK2Q63ZY3 851 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 RAET1GQ6H3X3 334 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 SDE2Q6IQ49 451 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 TRMT11Q7Z4G4 463 aaKnown RBP14.92□□□□□ -0.02
ACTB-204ENST00000425660 TRPC4APQ8TEL6 797 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 UBTD2Q8WUN7 234 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 ERLEC1Q96DZ1 483 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 UBE2ZQ9H832 354 aaPredicted RBP14.92□□□□□ -0.02
ACTB-204ENST00000425660 MID1IP1Q9NPA3 183 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 LIMD1Q9UGP4 676 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 DNAJC15Q9Y5T4 150 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 LRRK1Q38SD2 2015 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 E9PBE3 544 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 INPP4BO15327 924 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 SLC16A5O15375 505 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 KLHL41O60662 606 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 LILRB5O75023 590 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 ESRRBO95718 433 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 MAGEA9P43362 315 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 GRSF1Q12849 480 aaKnown RBP eCLIP14.92□□□□□ -0.026e-7■□□□□ 10
ACTB-204ENST00000425660 BOP1Q14137 746 aaKnown RBP14.92□□□□□ -0.02
ACTB-204ENST00000425660 FBXO48Q5FWF7 155 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 SULT1C3Q6IMI6 304 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 ADAMTSL4Q6UY14 1074 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.92□□□□□ -0.02
ACTB-204ENST00000425660 VRK3Q8IV63 474 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 HDDC3Q8N4P3 179 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 BEND7Q8N7W2 519 aaPredicted RBP14.92□□□□□ -0.02
ACTB-204ENST00000425660 ACTRT2Q8TDY3 377 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 PPM1EQ8WY54 764 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 ELMO1Q92556 727 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 RHBDF1Q96CC6 855 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 ZNF382Q96SR6 550 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 CDX2Q99626 313 aaPredicted RBP14.92□□□□□ -0.02
ACTB-204ENST00000425660 PHF7Q9BWX1 381 aaPredicted RBP14.92□□□□□ -0.02
ACTB-204ENST00000425660 ZNF385DQ9H6B1 395 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 TRIM39Q9HCM9 518 aa14.92□□□□□ -0.02
ACTB-204ENST00000425660 SEMA4BQ9NPR2 832 aaPredicted RBP14.92□□□□□ -0.02
ACTB-204ENST00000425660 EIF2B4Q9UI10 523 aaKnown RBP14.92□□□□□ -0.02
ACTB-204ENST00000425660 GOLGA8QA0A0J9YX86 632 aa14.91□□□□□ -0.02
ACTB-204ENST00000425660 A0A1B0GTL3 188 aa14.91□□□□□ -0.02
ACTB-204ENST00000425660 A0A1W2PP55 124 aa14.91□□□□□ -0.02
ACTB-204ENST00000425660 GOLGA8OA6NCC3 632 aa14.91□□□□□ -0.02
ACTB-204ENST00000425660 GOLGA8NF8WBI6 632 aa14.91□□□□□ -0.02
ACTB-204ENST00000425660 AZIN1O14977 448 aa14.91□□□□□ -0.02
ACTB-204ENST00000425660 SLC22A2O15244 555 aa14.91□□□□□ -0.02
ACTB-204ENST00000425660 TAPBPO15533 448 aa14.91□□□□□ -0.02
ACTB-204ENST00000425660 TM7SF2O76062 418 aa14.91□□□□□ -0.02
ACTB-204ENST00000425660 S100BP04271 92 aaPredicted RBP14.91□□□□□ -0.02
ACTB-204ENST00000425660 PTPN4P29074 926 aa14.91□□□□□ -0.02
ACTB-204ENST00000425660 MRPS21P82921 87 aaKnown RBP14.91□□□□□ -0.02
ACTB-204ENST00000425660 CLEC6AQ6EIG7 209 aa14.91□□□□□ -0.02
ACTB-204ENST00000425660 ADGRG6Q86SQ4 1221 aa14.91□□□□□ -0.02
ACTB-204ENST00000425660 CPSF7Q8N684 471 aaKnown RBP14.91□□□□□ -0.02
ACTB-204ENST00000425660 DEFB123Q8N688 67 aa14.91□□□□□ -0.02
ACTB-204ENST00000425660 OR56A4Q8NGH8 313 aa14.91□□□□□ -0.02
ACTB-204ENST00000425660 CEP70Q8NHQ1 597 aa14.91□□□□□ -0.02
ACTB-204ENST00000425660 GLMNQ92990 594 aa14.91□□□□□ -0.02
ACTB-204ENST00000425660 MSANTD3Q96H12 275 aa14.91□□□□□ -0.02
ACTB-204ENST00000425660 COX14Q96I36 57 aa14.91□□□□□ -0.02
ACTB-204ENST00000425660 ZNF514Q96K75 400 aaPredicted RBP14.91□□□□□ -0.02
ACTB-204ENST00000425660 LINC00615Q96LM1 132 aaPredicted RBP14.91□□□□□ -0.02
ACTB-204ENST00000425660 CCM2Q9BSQ5 444 aa14.91□□□□□ -0.02
ACTB-204ENST00000425660 HGH1Q9BTY7 390 aa14.91□□□□□ -0.02
ACTB-204ENST00000425660 GULP1Q9UBP9 304 aa14.91□□□□□ -0.02
ACTB-204ENST00000425660 TAGLN3Q9UI15 199 aa14.91□□□□□ -0.02
ACTB-204ENST00000425660 TSR3Q9UJK0 312 aaKnown RBP14.91□□□□□ -0.02
ACTB-204ENST00000425660 ZNF225Q9UK10 706 aa14.91□□□□□ -0.02
ACTB-204ENST00000425660 ST14Q9Y5Y6 855 aa14.91□□□□□ -0.02
ACTB-204ENST00000425660 COL6A3P12111 3177 aa14.91□□□□□ -0.02
ACTB-204ENST00000425660 SLC5A10A0PJK1 596 aa14.9□□□□□ -0.02
ACTB-204ENST00000425660 TMEM202A6NGA9 273 aa14.9□□□□□ -0.02
ACTB-204ENST00000425660 SHISA7A6NL88 538 aa14.9□□□□□ -0.02
ACTB-204ENST00000425660 MATN4O95460 622 aa14.9□□□□□ -0.02
ACTB-204ENST00000425660 GSTM1P09488 218 aa14.9□□□□□ -0.02
ACTB-204ENST00000425660 ESRRAP11474 423 aaPredicted RBP14.9□□□□□ -0.02
ACTB-204ENST00000425660 HOXB2P14652 356 aa14.9□□□□□ -0.02
ACTB-204ENST00000425660 ADSLP30566 484 aaPredicted RBP14.9□□□□□ -0.02
ACTB-204ENST00000425660 GGT5P36269 586 aa14.9□□□□□ -0.02
ACTB-204ENST00000425660 RPIAP49247 311 aa14.9□□□□□ -0.02
ACTB-204ENST00000425660 FOXA1P55317 472 aa14.9□□□□□ -0.02
ACTB-204ENST00000425660 GSTM4Q03013 218 aa14.9□□□□□ -0.02
ACTB-204ENST00000425660 TTC23LQ6PF05 361 aa14.9□□□□□ -0.02
ACTB-204ENST00000425660 CHSY3Q70JA7 882 aa14.9□□□□□ -0.02
ACTB-204ENST00000425660 CACUL1Q86Y37 369 aa14.9□□□□□ -0.02
ACTB-204ENST00000425660 CHCHD4Q8N4Q1 142 aa14.9□□□□□ -0.02
ACTB-204ENST00000425660 ESAMQ96AP7 390 aa14.9□□□□□ -0.02
ACTB-204ENST00000425660 PPP1R36Q96LQ0 422 aa14.9□□□□□ -0.02
ACTB-204ENST00000425660 PARVBQ9HBI1 364 aa14.9□□□□□ -0.02
ACTB-204ENST00000425660 MRGBPQ9NV56 204 aa14.9□□□□□ -0.02
ACTB-204ENST00000425660 SCML1Q9UN30 329 aa14.9□□□□□ -0.02
ACTB-204ENST00000425660 GPR34Q9UPC5 381 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms